Oncorhynchus gorbuscha (pink salmon): 124006654
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Entry
124006654 CDS
T07892
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogo03021
]
124006654 (supt6h)
03036 Chromosome and associated proteins [BR:
ogo03036
]
124006654 (supt6h)
Transcription machinery [BR:
ogo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
124006654 (supt6h)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
124006654 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
S1
Spt6_S1
HHH_9
S1_RRP5
HHH_3
SH2
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
124006654
NCBI-ProteinID:
XP_046172659
LinkDB
All DBs
Position
LG20:33557216..33607290
Genome browser
AA seq
1749 aa
AA seq
DB search
MSDFIDSEAEESEEEFEEKDLKPKKTQAFMDDEEEEEELNTEDQDEHGNLMGLIDDDVDE
DEEEEEKKSGGAGSGSDSEDEVRHRRKKRNYDDYLDDDDLDLIEENLGVKVKRRKKKYDR
VKTMDDDEDDEKDQIADEIFHRGDDEDGEGELEEGETVDPPLRRHGERLDEEEEEEGEEE
SDIDDFIVDDDGQPITKRRSKKFSGYTDAALQEAQEIFGGDFDFAEFDADGAYEQGEEEE
EDQDEEGWDRPKKPTKRRVGRKSIFELYEPSELESSHMTDQDNEIRSTDMPERFQLRSIP
VKPAEDDELEEEAEWIYRNAFSTPTISMQESTDYLDRGATTNFSRKGPSTIAKIKEALNF
MRNQHFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWCQLKSRKQNLTRLFRRMQGYQY
EQISADPDKPLADGIRPLDTADMERLKDVQSIDELSDVYSHFLLYYGRDIPKMQNAAKAA
SKKKKKKKKIEVNEEGEEEEVEEEEEVEEEKGPDLKLASRRDMYSICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPVELAKDYVCSQFNSPEVVLEGTRYMVAMQIAREP
LVRHVLRQTFQERAKINIKPTKKGKKDMDEAHFGYSFKYLKNKPVKELNGDQFLKMCQAE
EEGLLTIDICIDLLGVKGVAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERSLTQF
LYPQMAKELKNKLIAEAKENIIKSCCRRLYNWLKVAPYRPDQQAEEEDDDLMDESQGKGI
RVLGVAFADSRDTPVFCSLINGEGEVVDFLRLPYFLKRRNAWKEDERDKKLQDIENLKKF
LTSKKPHVVAVAGENRDAHMIMEDIKRTVSELEQESSLPAVGVELVDNELAVLYMNSTKS
QTEFRDYPPLLRQAVSVARKIQDPLVEYAQVCSSDEDILCLKLHPLQEHVVKEDLLSALY
CEFINRVNEVGVDVNRAISHPYTQSLVQFVCGLGLRKGSHLLKILKQNNTRLENRTQLVT
MCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDES
AEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRV
PYRAPNTEEVFNLLTKETPETFYIGKLITSVVTGIAHRRPQGESYDQAIRNDATGLWQCP
FCQQDNFPELSEVWNHFDSGSCPGQAIGVRARMDNGVQGFIPTKFLSDKVVKHPEERVKV
GMTVHCRIMKIDIEKFNVDLTCRTSDLMDKNNEWKLPKDSYYDFDTETEDTKTEEERKKK
QQRTTYIKRVIAHPSFHNINFKQAEKMMESMDQGDVVIRPSSKGENHLTVTWKVADGIYQ
HVDVREEGKENAFSLGHTLWINTEEFEDLDEITARYIQPMAAFARDLLGHKYFQDCNGGD
RKKMEELLIRSKKEKPTFIPYFVSACKDLPGKFILGYQPRGKPRVEYVTISPDGFRYRSQ
MFPTVNGLFRWFKDHFQEPVPGITPSSSSRTRTPASVNATPANINIADLTRAVSALPRNM
TSQMFSAIAAVTGQGQGQNANTTPAQWNSSQYGYTGGSSGGGGGSSSAYHVFATPQQPMA
TPMMTPSYSYTTPSQQTMGTPQYPSTPQSSHSHGHTQSNQGHSSHQGPSSNTPSSSSRGR
TPQQQPKSSGSTAVDWGKVAEQWLQEKEAERKKQKTPRMTPRPSPSPMIQSTPMSIAGDA
TPLLDEMDR
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcatcgatagcgaggctgaggagtcggaggaggagtttgaagagaaagac
ctgaagcctaaaaagacccaggcgtttatggatgatgaggaagaggaggaagagttaaac
acagaggaccaggatgagcacgggaacctgatggggctcatcgacgatgatgtggatgaa
gatgaggaagaggaagagaagaaaagcggaggagcaggcagcggcagcgactcagaggat
gaagtcagacacagacgcaagaaacgcaactatgatgactacctggatgatgatgatctg
gacctcattgaggagaacttgggagtcaaagtcaagaggaggaagaagaagtatgaccgt
gtgaagactatggatgatgatgaagatgacgagaaggaccagatcgcagacgagatcttc
cacagaggagatgacgaggacggagagggggagctggaggagggagagacagtcgacccg
cctctacgtcgccatggtgaacgcctcgacgaagaagaggaagaggagggagaggaggag
tcggatattgatgacttcatcgtggacgacgatggccagcctatcaccaagaggagaagc
aagaagttctcaggatacacagatgcagccctccaggaagctcaggagatcttcgggggc
gactttgactttgcggagttcgacgccgacggtgcttatgaacagggtgaggaagaggag
gaggaccaggatgaagagggctgggaccggcccaagaagccaacgaagaggagggtgggg
aggaagagcatcttcgagctctacgagcccagcgagctggagagtagtcacatgactgac
caggacaacgagatccgctccacagacatgccagagaggttccagctgcgctccatccca
gtgaagcctgctgaggatgatgagttggaggaagaggcagagtggatctacagaaacgct
ttctcaacccccaccatctccatgcaggagagtacagattacctggacagaggagccacc
actaacttcagcaggaagggccccagcaccatcgccaagattaaggaggccctcaacttc
atgaggaatcagcattttgaggttccattcatcgcgttctacaggaaggagtacgtagaa
ccagagctcaacatcaacgacctgtggaaggtctggcagtgggacgagaagtggtgccag
ctgaagagcaggaagcagaacctgacacgtctgttccggaggatgcaggggtaccagtat
gagcagatctctgccgaccccgacaagcccctggctgacggcatcaggcccctggacact
gctgatatggagagacttaaagatgtccagtccatagatgagctgagtgacgtgtatagt
cacttccttctgtactatggccgagacatccccaagatgcagaacgcagccaaagctgcc
agcaagaagaagaagaagaagaagaagattgaggtcaacgaggaaggtgaggaggaagag
gtggaggaagaggaggaggtggaggaagagaaggggccggacctgaagctggcatctcgt
agagacatgtacagcatctgtcagagcgctgggctcgatggcctggctaagaagtttggt
ctgactccagagcagtttggagagaatctgagagacagctaccagcgtcacgagacagag
cagttccctgccgagcctgtggagttggctaaagactacgtctgcagccagtttaacagc
cctgaggtggtgttggaggggacccgttatatggttgcgatgcagattgccagggagcct
ctggtcagacacgtcctcagacagacgttccaggagagagccaagatcaacatcaagccc
accaagaagggaaagaaggacatggacgaggcccactttggctactccttcaagtacctg
aagaacaagccagtgaaggaactgaacggagaccagttcttaaagatgtgccaggctgag
gaggaggggcttctcaccatagacatctgcatcgacctcctgggggtcaaaggggttgca
ggtgaccagacatactttgatgagatcaagcagttttactacagagatgagttcagtcac
caggtgcaggagtggaacagacagaggaccctggccatcgaacgctccctcacacagttc
ctctaccctcagatggccaaggaactcaagaacaaactcatcgcggaggccaaggaaaac
atcatcaagtcatgttgcaggaggctgtataactggctgaaggtggctccttacagacca
gaccagcaggcggaggaggaggatgatgatctgatggatgagagtcaaggaaaaggcatc
agagtcctgggagtggccttcgcagacagcagagacacgccagtgttctgttcactgatc
aacggagagggagaggtcgtggacttcctccgtctgccctacttcctgaagaggaggaac
gcatggaaggaggacgagagagacaaaaagctccaggacattgagaacctgaagaagttc
ctgaccagtaagaagcctcacgtggtggctgttgccggggagaatagggacgcccacatg
ataatggaggacattaagaggacagtgagtgagttggagcaggagtcttctctgcctgct
gtgggagtggagctggtagacaacgaactggccgtgctctatatgaacagtaccaaatct
cagactgagttccgtgactaccctcccctgctgcgccaggctgtgtcagtagccaggaag
attcaggatcctctagtggagtacgctcaggtctgcagctccgacgaagacatcctctgc
ctcaaactacaccctctacaggagcatgtagttaaggaggacctgctgagtgctctgtac
tgtgagtttataaaccgggtcaacgaggtgggggtggatgtgaacagagccatctctcac
ccctacacacagagcctggttcagttcgtctgtggcctcggactcaggaagggatcgcac
ctgctcaagatcctaaagcagaacaacactcgtctggagaacaggactcagctggtcact
atgtgtcacatgggccccaaggtcttcatcaactgtgctggcttcatcaagatagacacc
gcctctctcggagacagtactgactcatacatcgaggttctggatgggtccagggtgcac
ccggagacatatgagtgggccagaaagatggcggtggacgctctggaatacgacgagtca
gcggaggacgccaacccggccggagcgctggaggaaatcctggaaaacccggagcgcctc
aaagacctggacctggatgcgtttgctgaggagctggagagacagggttatggtaacaag
ggcatcaccctgtatgatatccgtgctgagttgagctgcaggtataaggacttgagagtt
ccctacagagctcctaacaccgaggaggtgtttaacctgcttaccaaggagacaccagag
accttctatataggtaagctgatcaccagtgttgtgaccggtatagctcaccggcgcccc
cagggggagagttatgaccaggccattaggaacgacgctacagggctgtggcagtgcccc
ttctgtcaacaggacaacttccctgaactcagcgaggtgtggaaccattttgacagtggt
tcgtgtcctggccaggctataggtgtgagggctcggatggacaacggtgtccagggcttc
atccccaccaagttcctcagtgacaaggtggtcaaacaccccgaggagagggtgaaggtg
ggtatgacggtacactgtcgcatcatgaagattgacattgagaagttcaacgtggacctg
acatgtcgtacgtctgacctgatggataaaaacaacgagtggaagctccctaaagacagt
tactacgactttgacacggagacagaggacaccaagaccgaggaggaacgcaagaagaaa
cagcagagaaccacctatataaaacgtgtgattgcacacccatccttccacaacatcaac
ttcaagcaggctgagaagatgatggagtccatggaccagggagatgttgttatcaggccc
agcagcaagggagagaaccaccttactgtcacctggaaggtagctgatggcatctatcag
catgttgatgtgagagaggagggcaaggagaacgccttcagcctgggacacacactctgg
atcaacactgaggagtttgaggatcttgatgagatcacagctcgttatattcagccaatg
gcagcgttcgctcgtgacctgctgggacacaagtacttccaggactgtaacggaggggac
aggaagaaaatggaggagttgttgatcaggtctaagaaggagaagcctacgttcataccc
tactttgtctcagcgtgtaaagacctgccagggaagttcatactgggataccagcctcgt
ggcaaaccacgtgttgagtatgtgaccatctctcctgacggcttccggtaccggtcccag
atgttccccaccgttaacggactgttccgctggttcaaagaccacttccaggaaccggta
ccaggcatcacccccagcagtagcagtcgaacacggacacctgcctctgtcaacgctaca
ccagctaacatcaacatcgcagacctgacgcgagcggtcagcgctctcccacgcaacatg
acctctcagatgttcagtgccattgccgcggtgacggggcaggggcagggccagaacgcg
aacactacgcctgcccagtggaactccagccaatacggttacaccgggggcagcagtggg
ggcgggggaggcagctcctcagcctatcacgtgtttgcgacgccccaacagccgatggcg
acacccatgatgacccccagctactcctacaccacccccagccagcagaccatgggtacc
ccgcagtacccctccaccccccagtcctcccactcccatggacacacacagagcaaccag
ggccacagcagccaccagggaccctcgtccaacactccctcatcctcctccagaggacgc
actccgcagcagcagcctaagtcgagcggcagcacggcggtggactggggcaaggtagcg
gagcagtggctccaggagaaggaggcggagaggaagaagcagaagacccccagaatgacc
ccgcgaccttcccccagccccatgatccagagcacgcctatgtcaatcgctggagacgcc
acgccccttctggacgagatggaccgatag
DBGET
integrated database retrieval system
