Oncorhynchus gorbuscha (pink salmon): 124006706
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Entry
124006706 CDS
T07892
Name
(RefSeq) guanine nucleotide exchange factor VAV2-like isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510
Focal adhesion
ogo04517
IgSF CAM signaling
ogo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124006706
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124006706
09142 Cell motility
04810 Regulation of actin cytoskeleton
124006706
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_2
CH
SH3_1
SH3_9
SH2
SOS1_NGEF_PH
PH
C1_1
RHG20_PH
DUF7145
C1_2
SH2_2
PLU-1
PH_10
CDC24
DH_Alsin
Nup88
Motif
Other DBs
NCBI-GeneID:
124006706
NCBI-ProteinID:
XP_046172754
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Position
LG20:20678751..20937202
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AA seq
859 aa
AA seq
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MEEWRQCGRWLIDCKVLPPNHRVVWPSAAVFDLAQALRDGVLLCQMLHNLSPGSVDLKEI
NFRPQMSQFLCLKNIRTFLKVCHDKFGLRNSELFDPFDLFDVRDFGKVISALSRISHHSI
VQIKGVRPFPSEDTALNEDDVYRSLEELADEHDVGEDDIYDCVPCEDDGDDIYEDIIKVE
VRQPMIRYMQKMGMTEDDKRNCCLVEIQETEAKYYKTLEDIEKNYMIPLKQVLCPQDMGA
IFVNLEDVIKVHFALLRAIDLNMVSGGNGLGKIFIDFKERLLIYGQYCSHMETSQKTLDE
LITTREDVKMKVEECTMKVQEGKFKLQDLLVVPMQRVLKYHLLLKELVSHSTDRPDRQQL
KEALEAMQDLAMYINEVKRDNETLKKISEFQNSIENLQQVKLEEYGRPKIDGELKVSSIV
NRTKQDRYIFLFDKVVIVCKRKGYCYELKEIIELQSYKMSDDPMNNRDVKKSSGKMWSYG
FYLIHLQGKQGFQFFCKTEDTKRKWMEQFEMAMSNIKPEKATANQHNFQMHTFEKNTNCR
ACKMLLRGIFYQGYYCSRCGTGAHKECLECITICKINPLDTDLGLPSSGPKMVAVRNYHG
TPVPPGKTPLSFQTGDFIELLKGEPDTTWWEGKLIQTQKSGFFPNNCVKPCLDPKPLFQS
FPSRQPSRETDYYGYPWFAGNMERTQADNLLKSHSSGTYLIRERTAEAERFAISIKFNEE
VKHIKVIEKDSWIHITEAKKFESLLELVEYYQSHSLKESFKLLDTTLRYPYKSKERGPAS
RASTRSPGEPIPVFTPRVVSTAVARYNFAARDMRELSLREGDIVKIYSKIGGDQGWWKGE
ANDRIGWFPSTYVDEEGVQ
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtggaggcaatgcgggcggtggttgatagactgcaaggttttgcccccaaac
caccgggtcgtgtggccttctgcagctgtgttcgacttggcacaggcgctacgagacgga
gtgctcttgtgccagatgttgcacaacctgtcaccggggtctgtggacctaaaggagatc
aacttcagaccccagatgtcccagtttctctgtctgaagaacatccggacgttcctcaag
gtgtgccacgacaagtttggcctgcgtaacagtgagctgtttgacccctttgacctgttc
gatgtcagggatttcggcaaggtgatctcagccctgtccaggatctcccaccacagcatt
gtgcagatcaaaggcgtgaggccttttccttcggaggacactgctctgaatgaggatgac
gtgtaccggagtcttgaggagctggcagatgagcatgacgtgggggaggatgacatctac
gactgtgttccctgtgaggatgatggagatgacatctacgaggacatcatcaaggtggaa
gtacgacaacccatgatcagatacatgcagaaaatgggcatgacagaagacgacaagaga
aactgctgcttagtggagatccaggagactgaggccaagtactacaagacgctggaggac
attgagaagaattatatgattcccctgaagcaagttctatgtccacaagacatgggggcc
atctttgtaaatctggaggatgtgattaaggtccactttgctctgctgagggccatcgac
ctcaacatggtgagcggaggcaacggtctggggaagatcttcatagacttcaaggaaagg
ttgctgatctacggccagtactgcagccacatggaaacctctcagaagacactggatgag
cttatcaccacgcgggaggacgtcaagatgaaagtagaggagtgcactatgaaggtgcag
gaggggaagttcaagctccaggacctgttggtcgtgcccatgcagagagtactaaagtac
cacctcctactcaaggagctggtgagtcattcaactgaccgacctgatagacagcagctg
aaggaggcgttggaggccatgcaggacttggctatgtacatcaatgaagtgaagagagac
aacgagaccttgaagaagattagtgaattccagaactccatcgagaaccttcagcaggtc
aaactggaggagtatggcagaccaaagatagacggagagctcaaggtgtcctccatagtt
aaccgaactaagcaggaccggtacatattcctgttcgataaagtggtcattgtgtgcaag
cggaaaggctactgctatgaactgaaagagatcattgagctgcagtcatacaaaatgtcc
gacgaccccatgaacaacagggacgtgaagaagtccagtggaaaaatgtggtcctatggc
ttctacctgatccacctgcaaggcaagcagggctttcagttcttctgtaaaacagaggac
accaagaggaaatggatggagcagtttgagatggccatgtcaaacatcaagccggagaaa
gccacggccaatcagcacaacttccagatgcacacgtttgagaagaacaccaactgccga
gcttgcaagatgctgctgagggggatcttctaccaggggtactactgttcccgctgtggg
actggagctcataaagagtgtctagagtgcatcaccatctgcaaaatcaatccactcgac
acggacctcggactaccgtcatcaggcccgaagatggtagcagtaaggaactatcatggg
acgcctgttcctccggggaagactccactctccttccagacaggggacttcatcgagctg
ctgaagggggaacctgacaccacctggtgggagggaaagcttatccaaacccagaagagt
ggcttctttcctaacaactgtgtaaagccttgtttggaccccaagcctttgttccagtcc
ttccccagccggcagccctcaagggaaacagactactatggatacccctggtttgctggc
aacatggagcggacacaggctgacaacctgttgaagtcccacagcagtggaacatacctg
atcagagagaggactgctgaggcagagaggttcgccatcagcatcaagttcaatgaggaa
gtgaagcacattaaagtcattgagaaagacagctggatccacatcactgaggctaagaag
tttgagagtctactggagttggtggagtactatcagtctcattcgctgaaggagagtttc
aagctgctagacacgactttacgatatccctacaaatctaaagaacgggggccggcgtcg
cgggccagcacccgctctccaggtgagcccatccctgtattcacgccgagggtggtcagc
acagcggtggccaggtacaactttgcagcacgggacatgagagagctgtctctcagagaa
ggggacatcgtcaagatctacagcaagattggaggagaccaggggtggtggaagggagag
gccaatgacaggattggctggtttccctcaacgtacgttgacgaagaaggagttcagtga
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