Oncorhynchus gorbuscha (pink salmon): 124006706
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Entry
124006706 CDS
T07892
Name
(RefSeq) guanine nucleotide exchange factor VAV2-like isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510
Focal adhesion
ogo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124006706
09142 Cell motility
04810 Regulation of actin cytoskeleton
124006706
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_2
CH
SH3_1
SH3_9
SH2
SOS1_NGEF_PH
PH
C1_1
RHG20_PH
DUF7145
C1_2
SH2_2
PLU-1
PH_10
CDC24
Nup88
Motif
Other DBs
NCBI-GeneID:
124006706
NCBI-ProteinID:
XP_046172754
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All DBs
Position
LG20:20678751..20937202
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AA seq
859 aa
AA seq
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MEEWRQCGRWLIDCKVLPPNHRVVWPSAAVFDLAQALRDGVLLCQMLHNLSPGSVDLKEI
NFRPQMSQFLCLKNIRTFLKVCHDKFGLRNSELFDPFDLFDVRDFGKVISALSRISHHSI
VQIKGVRPFPSEDTALNEDDVYRSLEELADEHDVGEDDIYDCVPCEDDGDDIYEDIIKVE
VRQPMIRYMQKMGMTEDDKRNCCLVEIQETEAKYYKTLEDIEKNYMIPLKQVLCPQDMGA
IFVNLEDVIKVHFALLRAIDLNMVSGGNGLGKIFIDFKERLLIYGQYCSHMETSQKTLDE
LITTREDVKMKVEECTMKVQEGKFKLQDLLVVPMQRVLKYHLLLKELVSHSTDRPDRQQL
KEALEAMQDLAMYINEVKRDNETLKKISEFQNSIENLQQVKLEEYGRPKIDGELKVSSIV
NRTKQDRYIFLFDKVVIVCKRKGYCYELKEIIELQSYKMSDDPMNNRDVKKSSGKMWSYG
FYLIHLQGKQGFQFFCKTEDTKRKWMEQFEMAMSNIKPEKATANQHNFQMHTFEKNTNCR
ACKMLLRGIFYQGYYCSRCGTGAHKECLECITICKINPLDTDLGLPSSGPKMVAVRNYHG
TPVPPGKTPLSFQTGDFIELLKGEPDTTWWEGKLIQTQKSGFFPNNCVKPCLDPKPLFQS
FPSRQPSRETDYYGYPWFAGNMERTQADNLLKSHSSGTYLIRERTAEAERFAISIKFNEE
VKHIKVIEKDSWIHITEAKKFESLLELVEYYQSHSLKESFKLLDTTLRYPYKSKERGPAS
RASTRSPGEPIPVFTPRVVSTAVARYNFAARDMRELSLREGDIVKIYSKIGGDQGWWKGE
ANDRIGWFPSTYVDEEGVQ
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtggaggcaatgcgggcggtggttgatagactgcaaggttttgcccccaaac
caccgggtcgtgtggccttctgcagctgtgttcgacttggcacaggcgctacgagacgga
gtgctcttgtgccagatgttgcacaacctgtcaccggggtctgtggacctaaaggagatc
aacttcagaccccagatgtcccagtttctctgtctgaagaacatccggacgttcctcaag
gtgtgccacgacaagtttggcctgcgtaacagtgagctgtttgacccctttgacctgttc
gatgtcagggatttcggcaaggtgatctcagccctgtccaggatctcccaccacagcatt
gtgcagatcaaaggcgtgaggccttttccttcggaggacactgctctgaatgaggatgac
gtgtaccggagtcttgaggagctggcagatgagcatgacgtgggggaggatgacatctac
gactgtgttccctgtgaggatgatggagatgacatctacgaggacatcatcaaggtggaa
gtacgacaacccatgatcagatacatgcagaaaatgggcatgacagaagacgacaagaga
aactgctgcttagtggagatccaggagactgaggccaagtactacaagacgctggaggac
attgagaagaattatatgattcccctgaagcaagttctatgtccacaagacatgggggcc
atctttgtaaatctggaggatgtgattaaggtccactttgctctgctgagggccatcgac
ctcaacatggtgagcggaggcaacggtctggggaagatcttcatagacttcaaggaaagg
ttgctgatctacggccagtactgcagccacatggaaacctctcagaagacactggatgag
cttatcaccacgcgggaggacgtcaagatgaaagtagaggagtgcactatgaaggtgcag
gaggggaagttcaagctccaggacctgttggtcgtgcccatgcagagagtactaaagtac
cacctcctactcaaggagctggtgagtcattcaactgaccgacctgatagacagcagctg
aaggaggcgttggaggccatgcaggacttggctatgtacatcaatgaagtgaagagagac
aacgagaccttgaagaagattagtgaattccagaactccatcgagaaccttcagcaggtc
aaactggaggagtatggcagaccaaagatagacggagagctcaaggtgtcctccatagtt
aaccgaactaagcaggaccggtacatattcctgttcgataaagtggtcattgtgtgcaag
cggaaaggctactgctatgaactgaaagagatcattgagctgcagtcatacaaaatgtcc
gacgaccccatgaacaacagggacgtgaagaagtccagtggaaaaatgtggtcctatggc
ttctacctgatccacctgcaaggcaagcagggctttcagttcttctgtaaaacagaggac
accaagaggaaatggatggagcagtttgagatggccatgtcaaacatcaagccggagaaa
gccacggccaatcagcacaacttccagatgcacacgtttgagaagaacaccaactgccga
gcttgcaagatgctgctgagggggatcttctaccaggggtactactgttcccgctgtggg
actggagctcataaagagtgtctagagtgcatcaccatctgcaaaatcaatccactcgac
acggacctcggactaccgtcatcaggcccgaagatggtagcagtaaggaactatcatggg
acgcctgttcctccggggaagactccactctccttccagacaggggacttcatcgagctg
ctgaagggggaacctgacaccacctggtgggagggaaagcttatccaaacccagaagagt
ggcttctttcctaacaactgtgtaaagccttgtttggaccccaagcctttgttccagtcc
ttccccagccggcagccctcaagggaaacagactactatggatacccctggtttgctggc
aacatggagcggacacaggctgacaacctgttgaagtcccacagcagtggaacatacctg
atcagagagaggactgctgaggcagagaggttcgccatcagcatcaagttcaatgaggaa
gtgaagcacattaaagtcattgagaaagacagctggatccacatcactgaggctaagaag
tttgagagtctactggagttggtggagtactatcagtctcattcgctgaaggagagtttc
aagctgctagacacgactttacgatatccctacaaatctaaagaacgggggccggcgtcg
cgggccagcacccgctctccaggtgagcccatccctgtattcacgccgagggtggtcagc
acagcggtggccaggtacaactttgcagcacgggacatgagagagctgtctctcagagaa
ggggacatcgtcaagatctacagcaagattggaggagaccaggggtggtggaagggagag
gccaatgacaggattggctggtttccctcaacgtacgttgacgaagaaggagttcagtga
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