Oncorhynchus gorbuscha (pink salmon): 124006817
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Entry
124006817 CDS
T07892
Name
(RefSeq) nuclear factor related to kappa-B-binding protein-like isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124006817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124006817
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
124006817
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
124006817
NCBI-ProteinID:
XP_046172947
LinkDB
All DBs
Position
LG20:27396018..27418278
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AA seq
1274 aa
AA seq
DB search
MDALDHMLTDPLDSGEGSDGRITEECMLGNCQVSLPEDLLEDPEIFFSVLSESTWSEVLT
DDQRQHLRQLLPHFQEDNTCEQDSTISKLFNKQNFCFGNPLHLAQKLFQDGHFNPEVVKY
RQLCAKSQKKRQLNSLQQYYHKLLKQILVSRKELLELAVRSGPDIAVNRKYPTQTHGEVQ
EQRVRGRVCRILREVKTECGDSNASSDDDDTASWLPTPQSPSSPTPTVSVRVLPSLSTQD
MKTTDKQELGEKDMRAMLRRHREKRRRQPDHPDLMTSDIRLGDMMSRVNIGRKGSMMTLF
DLALPKRKMREERRKKKMRTIKVESEDPCEALMPSEAPAPSVNITATLPETPVTPLPSVK
EEPMEEVQNSPVMVEEIAVSFFNLLENILKLDGLASTTMLEEKVQQWQTSPASSLNPWFS
SASCWSEMVLPALHFLAGETKVGMLVLPSGFTPYVAFRENSQRWKWIGPSQDGEKDLSAL
CQLWVDSKDLVVVKTECEELTEMTSPTPRVSWTDFVVRPSTGDERHVFQVQEQQRYDQPH
KAFTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPAYVTILSLVRDAAARLPNG
EGTRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRD
RGQEEFERIHQAQAAAAKARKALQQKPKPASKPKSGSKEGGGKTPGGLEASDVGGPMSPT
PTTPTTSTPGTPKSPLAPVATTPTKAGIPDSVKTSPGVLLVSPPPMPQLGTLLSSSQSGP
QVSQPATSQHTARVVGHQSGTLPQVRVVSSQTAGGQHATLVHQTPHQIRVPVTMGTKGIT
QAVVSLPLRTQSAGSPIQVQASRGQTTLSVSGLTTAVTVLKPQTASPGSPAHNPTSPAVR
QGVTSQNIIKQVAITGQLGIKSQGRPGLPITTTNLRIQGKDVLRLPPSSITTDSKGQTVL
RITPDMMATLTKSPLTTVKLTPDMLGTATTKSISATLHVAPPHSSSSPASSSGEVRTSKA
SAGTTTLLKAAGDTIRLMPTLAVTMAEQKTRTFSTVSSSDSKSGTTIRIMPGLGVIPHKQ
GQPITMTTTTGSKPVSTGAATVTIATSGLAGAKGVTVGSSASGSLSLGTATATVRQVPVT
ATVVSTQPGKLPARFTVPLSVLSQPLKSKSVMTTPMLKGNLSTNISSLGRNIILTTMPAG
TKLIAGNKPVSFVTAQQLQQLQQQGQATQVRIQTVPAQQLQQRSAAGSPKSMSTVVVTTA
PSPKRAPDPPPPAQ
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggatgcacttgatcacatgctgaccgaccccctagattcgggggagggcagtgatggg
cgcatcactgaagagtgcatgttgggaaactgtcaagtgagtcttccagaagacctgctt
gaggatcctgaaatattcttctctgtgctgagtgaaagcacctggtctgaagtactgaca
gatgaccagaggcagcatctccgtcaactgttaccacactttcaagaagacaacacttgt
gagcaggacagcaccatcagcaaactcttcaacaaacagaacttctgcttcggaaacccc
ttgcaccttgcacagaaactgttccaagatggccacttcaatccagaagtggttaagtac
agacaactgtgtgccaagtcccagaagaaacgccagctgaactcgttgcagcagtactac
cacaaactccttaaacagatcctggtctctagaaaggaactgctagagttggctgtccgc
agtggccctgacattgcggtgaacagaaagtatcccacccagacacatggtgaggtgcag
gaacagagggtcagaggaagagtgtgccggatactgagggaagttaaaactgagtgtgga
gacagcaatgcctcatctgacgatgatgatacagcctcttggctgccaacacctcaatct
ccttcctctccaacgcccacagtctctgtcagggttttgcccagtctctccacccaggac
atgaagaccaccgataagcaagaactgggagagaaggacatgagagccatgctacggaga
catagagagaagaggagacgacaaccggatcatccagacttgatgacttctgacatccgc
ctgggtgacatgatgtctagagtgaacataggtcgtaaaggctccatgatgacactgttt
gacctggctctgcccaagaggaagatgagggaggagaggagaaagaagaagatgaggaca
attaaagtggagtctgaggatccctgtgaggctctgatgccttcagaagccccagctcca
tcagttaacatcacagctactctgcctgagaccccagtcactccactgcccagtgtcaag
gaagaaccgatggaggaggtgcagaacagccctgtcatggtggaggagatcgcagtgagc
ttcttcaacctgctggagaacatcctaaaactagacggcctcgccagcaccaccatgttg
gaggagaaggtccaacagtggcagacatctccagctagttccctgaacccctggttctcc
tcggcctcctgctggtcagagatggtgctgccggccctgcacttcctggctggggagact
aaagtcggtatgttggttcttcccagtggcttcactccctatgtggcgttcagagaaaac
tcacagcgatggaaatggattggtcccagtcaggatggagagaaggatttgagtgctctg
tgtcagctgtgggtcgactccaaggacttggttgtggtcaagacagaatgtgaagaacta
acagagatgacttctcccacccctagagtcagttggactgacttcgtggtgcggcccagc
acaggagacgagaggcatgttttccaagtgcaggagcagcagcggtatgaccagccacac
aaagccttcaccttcagaatgcatggctttgagtctgtggtggggcctgttaagggggtc
tttgacaaggagatgtctctcaacaaagccagagaacacactctgctgcgctccgaccgc
ccagcttatgtcacaatcctctccttggtgcgggacgcagcagcccggctgcccaacgga
gaggggaccagagctgagatctgtgagctgctcaaggactctcaattcctggcaccagat
gtcaccagtgctcaggtgaacacggttgtgagtggggctctggacaggctgcactatgag
aaggacccctgtgtgaagtatgacatcggccgcaagctgtggatctacctgcaccgtgac
cgcggtcaggaggagtttgagaggattcaccaggctcaagctgctgctgccaaggccaga
aaggctctgcagcagaaacctaaacctgcgtctaagcctaagtctggaagtaaggagggg
ggtggtaagacccctggaggcctggaagcaagtgatgtggggggtcccatgtccccaact
ccaaccacccccactaccagcacgcctggaacccccaaatcacccctcgcccctgtagcc
acaacccccaccaaagctgggatcccagattcagtcaagaccagtcctggtgttctattg
gtgtctcctccccccatgccccagctggggaccctgttgtccagcagccagtctggcccc
caggtctctcagccagctacctcccaacacacagccagggtagtgggccaccagtcaggc
actctcccacaggtacgagtggtttcttcccagacagcaggaggacagcatgccacgctg
gtgcaccaaacccctcatcaaatcagagtgccagtcaccatgggaaccaagggcatcaca
caggctgtggtgtcattaccactgaggacccagtctgctggtagccccatccaggtgcag
gcatccagagggcagacaaccctgtcagtgtcaggcctgaccactgctgttactgtactc
aaacctcagactgcatcccctggcagcccagcacacaaccctacctcccccgctgtccga
cagggagtcaccagccagaacatcatcaaacaggtggctatcacaggccagttgggcata
aagtctcaaggtagaccgggtcttccaataacgactaccaatcttcgcatccagggcaag
gatgtgctccgcctgcccccctcctccatcaccacagactctaaaggacagacggtgctg
cggatcactcctgacatgatggccaccctaactaagtcccctctcaccaccgtcaaactc
acccccgacatgttaggcactgccactaccaagagcatatctgctactctccatgtagcc
ccaccccactccagctccagcccagcctcctcctcgggtgaagtccggaccagcaaggcc
tctgctggcaccaccaccctgttgaaggctgcaggggacactatccgcctgatgcccacc
ctagcagtcactatggccgagcagaagaccagaaccttctccaccgtctcctcgtctgac
tcgaagagtggcaccaccatacggatcatgcctggcctcggggtcatcccacataaacag
ggccaacccatcaccatgacaaccaccactggcagcaaaccagtctccactggagccgcc
actgtcaccatagccaccagcggactggccggagctaaaggggtgacggtgggatcttct
gcctcaggctccctgtctctgggaacagccactgctactgtccgccaggtccccgtcaca
gccacagtggtgtccacacaaccagggaagttaccagctcggttcacagtgcctctgtct
gtcctcagccaaccactgaaaagtaagagtgtgatgaccacgcccatgctgaaaggaaac
ctcagtaccaatatcagcagtctcggcaggaacatcatcctcaccaccatgcctgccggt
accaagctgatagctgggaacaagccagtcagctttgtcacagctcaacagttacagcag
ctgcagcagcagggacaggccacacaggtgcggatccagacggtgccagcccagcagctc
cagcagcgctctgcagcaggctcccccaagtcaatgtccactgtcgtagtcaccaccgca
ccctcacccaaacgggccccggacccgccaccaccagcacagtga
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