Oncorhynchus gorbuscha (pink salmon): 124007002
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Entry
124007002 CDS
T07892
Symbol
zgc:100918
Name
(RefSeq) ras-related protein rab7-like
KO
K07897
Ras-related protein Rab-7A
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04137
Mitophagy - animal
ogo04140
Autophagy - animal
ogo04144
Endocytosis
ogo04145
Phagosome
ogo04148
Efferocytosis
ogo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124007002 (zgc:100918)
04145 Phagosome
124007002 (zgc:100918)
04140 Autophagy - animal
124007002 (zgc:100918)
04137 Mitophagy - animal
124007002 (zgc:100918)
04148 Efferocytosis
124007002 (zgc:100918)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124007002 (zgc:100918)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124007002 (zgc:100918)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124007002 (zgc:100918)
04031 GTP-binding proteins [BR:
ogo04031
]
124007002 (zgc:100918)
Membrane trafficking [BR:
ogo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
124007002 (zgc:100918)
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124007002 (zgc:100918)
Exosomal proteins of other body fluids (saliva and urine)
124007002 (zgc:100918)
Exosomal proteins of colorectal cancer cells
124007002 (zgc:100918)
Exosomal proteins of bladder cancer cells
124007002 (zgc:100918)
GTP-binding proteins [BR:
ogo04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
124007002 (zgc:100918)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
cobW
PduV-EutP
ATP_bind_1
nSTAND3
Septin
AAA_16
NTPase_1
AAA_22
AAA_7
DUF5992
AAA_24
G-alpha
AAA_5
SRPRB
ATPase_2
NACHT
NB-ARC
AAA_14
ABC_tran
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
124007002
NCBI-ProteinID:
XP_046173188
LinkDB
All DBs
Position
LG20:complement(6386856..6396913)
Genome browser
AA seq
205 aa
AA seq
DB search
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPF
VVLGNKIDLENRQVTTKRAQAWCASKSSIPYFETSAKEAINVDQAFQTIARNALKQESEV
ETYDFPDQIKLRDDRPADPSDGCSC
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccgtaagaaggtgctgctgaaggtgatcatcctcggagactctggggtaggg
aagacttctctgatgaaccagtatgtaaataagaagttcagtaaccagtacaaggccact
ataggagcggacttcctcaccaaggaggtgatggtggacgacaggctggtcaccatgcag
atctgggacacggcggggcaggagcgtttccagtctctgggcgtggcgttctaccgcggc
gctgactgctgtgtgctggtctacgatgtcacggcgcccaacaccttcaagacactggac
agctggagggatgagttcctgattcaggccagccccagagacccagacaacttccccttt
gtggtgctaggcaacaagattgacctcgagaacagacaggtgacgacaaaacgtgcccag
gcctggtgtgccagtaagagcagcatcccctactttgagaccagcgccaaggaggccatc
aacgtagaccaagcattccagaccattgcccgcaatgcccttaaacaggagtctgaggtg
gagacgtatgacttcccagaccagatcaaactgagagacgaccggcccgccgaccccagc
gacggctgctcctgctga
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