KEGG   Oncorhynchus gorbuscha (pink salmon): 124007002
Entry
124007002         CDS       T07892                                 
Symbol
zgc:100918
Name
(RefSeq) ras-related protein rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04137  Mitophagy - animal
ogo04140  Autophagy - animal
ogo04144  Endocytosis
ogo04145  Phagosome
ogo04148  Efferocytosis
ogo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124007002 (zgc:100918)
   04145 Phagosome
    124007002 (zgc:100918)
   04140 Autophagy - animal
    124007002 (zgc:100918)
   04137 Mitophagy - animal
    124007002 (zgc:100918)
   04148 Efferocytosis
    124007002 (zgc:100918)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124007002 (zgc:100918)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogo04131]
    124007002 (zgc:100918)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ogo04147]
    124007002 (zgc:100918)
   04031 GTP-binding proteins [BR:ogo04031]
    124007002 (zgc:100918)
Membrane trafficking [BR:ogo04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    124007002 (zgc:100918)
Exosome [BR:ogo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124007002 (zgc:100918)
  Exosomal proteins of other body fluids (saliva and urine)
   124007002 (zgc:100918)
  Exosomal proteins of colorectal cancer cells
   124007002 (zgc:100918)
  Exosomal proteins of bladder cancer cells
   124007002 (zgc:100918)
GTP-binding proteins [BR:ogo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    124007002 (zgc:100918)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase cobW PduV-EutP ATP_bind_1 nSTAND3 Septin AAA_16 NTPase_1 AAA_22 AAA_7 DUF5992 AAA_24 G-alpha AAA_5 SRPRB ATPase_2 NACHT NB-ARC AAA_14 ABC_tran ATP-synt_ab
Other DBs
NCBI-GeneID: 124007002
NCBI-ProteinID: XP_046173188
LinkDB
Position
LG20:complement(6386856..6396913)
AA seq 205 aa
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPF
VVLGNKIDLENRQVTTKRAQAWCASKSSIPYFETSAKEAINVDQAFQTIARNALKQESEV
ETYDFPDQIKLRDDRPADPSDGCSC
NT seq 618 nt   +upstreamnt  +downstreamnt
atggcctcccgtaagaaggtgctgctgaaggtgatcatcctcggagactctggggtaggg
aagacttctctgatgaaccagtatgtaaataagaagttcagtaaccagtacaaggccact
ataggagcggacttcctcaccaaggaggtgatggtggacgacaggctggtcaccatgcag
atctgggacacggcggggcaggagcgtttccagtctctgggcgtggcgttctaccgcggc
gctgactgctgtgtgctggtctacgatgtcacggcgcccaacaccttcaagacactggac
agctggagggatgagttcctgattcaggccagccccagagacccagacaacttccccttt
gtggtgctaggcaacaagattgacctcgagaacagacaggtgacgacaaaacgtgcccag
gcctggtgtgccagtaagagcagcatcccctactttgagaccagcgccaaggaggccatc
aacgtagaccaagcattccagaccattgcccgcaatgcccttaaacaggagtctgaggtg
gagacgtatgacttcccagaccagatcaaactgagagacgaccggcccgccgaccccagc
gacggctgctcctgctga

DBGET integrated database retrieval system