Oncorhynchus gorbuscha (pink salmon): 124007044
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Entry
124007044 CDS
T07892
Name
(RefSeq) zinc finger BED domain-containing protein 4-like isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124007044
04121 Ubiquitin system [BR:
ogo04121
]
124007044
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
124007044
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
124007044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF7477
Motif
Other DBs
NCBI-GeneID:
124007044
NCBI-ProteinID:
XP_046173267
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All DBs
Position
LG02:64208703..64213132
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AA seq
949 aa
AA seq
DB search
MTINHSVEVYIDVLALNWMLKKAVYCSHCEQSFSYHHSNIRLQYHLRGENTVISDNSNMD
FRGYPLSSSLAPNLRRRGERGATGLVLDRRKSTVWNYYIQLNEMYVECNICKRQLSFHNS
TTTMREHLVRKHNIRDNAPPVLDNTAVAGAPIPATSLQPMAQPGFPCNISTTSATANTCM
FQTDLHIVVKEEQQDADLSPEQGMAKRARITCAPPLDVGGGANAIPVTSQNLEPSNSNAG
LLYSENNNFGDTNRSGITTKELNGKRTGVLTDLILEMVYRDLQPLSVVEESGFRLLLSYL
EPQYPVPSPSQLGSLLWHHYDVLKRHLQQYLQSGLAPRCITLCTEYWQSVAGCAVGAGGR
LFFTVSAHFVDKDWRLARCVLQTCPMPDIREKICERGFIQFGDTLKAVLSEFHLPQSSVF
CVVHDTPRISEARGTENMGVPKEKVNRTAGPHQSPQDLPEGWVALHCAGEALKLCIQDGL
WMEPVRQALAEARRIISHFQHDAPAAAALIHKAEAANKAGACLVLDDPGRWATAIDMCES
LLELKWVVSSVLEEQKAAPNLADHQWRLLQELVPVLKTVRIAASFLSEDINLSISALMPC
LHGVSRVLEQHIAETSCPVARGVMETVRSGMERQWRLGEEEALLDSPAVLSSFLDPRFKE
LRFLSPHARSRLHDKVKELLSAQAQIEVEEMSRECDKGGEDEDGEEGREKEVRNRGLDHS
QSTIAPLDSPVSCESNEEGDIIVLQQQLKGLSQTAPSQVSGEGLGEGSRCSAGNGPRRVA
GLSSLLKGDLQPPAYRQVSHVPKSMYDILLGEDPTERMPEIHQQLENYIAEPLCKRSLSP
LHWWRSKEHRFPAVARLARTFLAIPATAVPADRAFAPRETTVAQRRAILGPQHLDHILFL
HQNSDYVEKLMGGSTGHEERGSDRNGAKQTLYQSLVSYESKAWVGGEKL
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgactatcaaccactcagttgaagtttacatagacgttttggctttaaattggatgcta
aaaaaagcagtctactgttctcattgtgagcaaagcttttcctaccatcacagcaatata
cgcttgcaataccatttgcggggggaaaacacagtgatttccgacaactctaacatggat
ttccgagggtaccccctgtccagcagtctggccccaaatttgaggagaaggggcgaacgg
ggagcaacaggactggttctggataggcgcaagtcaaccgtttggaattactacatccag
cttaatgagatgtatgttgagtgtaatatatgcaagaggcagttgtcttttcacaacagc
actacgactatgagggagcaccttgtccgcaaacataatatacgcgacaacgcgccacct
gtacttgataacacagcagtggccggggccccgattccagctacatcactccagccaatg
gcccagcccggattcccctgcaacatctctactacatctgccacagccaacacatgcatg
ttccagacagatttgcacatagttgtaaaagaggagcagcaggatgctgacttatctcct
gaacaagggatggccaaacgtgcccgaatcacatgtgctcctcccctagatgtaggaggc
ggtgccaatgcaatccctgtcaccagccaaaatttggaaccatcaaactcaaatgctgga
ttactatatagtgagaacaacaactttggtgataccaaccgtagtggtatcaccaccaaa
gaattgaatggcaagcgtactggtgttctgactgacctaatattggaaatggtgtacagg
gacttgcagccactgtctgtggtggaggagagtggatttcgtctcctattgagctactta
gaaccacagtacccagtgccgtctccctctcagcttggcagccttctttggcatcactat
gatgttctgaaacggcacctgcagcagtatcttcagtctggcctggctccacgttgcata
acactttgcactgagtactggcagtccgtagcaggttgtgcggtgggagcaggcggtcgc
ctcttcttcactgtaagtgcacattttgttgacaaagactggcgcttggcccgttgtgtg
ctgcagacctgtcccatgcccgatatcagggagaagatttgtgaaagagggttcattcaa
tttggggacacgctgaaggcagttctctctgaatttcatcttccccagagctctgttttc
tgtgttgtacatgacactcccaggatctcagaggccagagggactgagaatatgggagtt
ccgaaagaaaaagttaatcgtactgctggaccacaccaatcacctcaagatctcccagaa
ggctgggtagcgttacactgtgcaggggaagcccttaaactctgcatccaggacggacta
tggatggaacctgtcagacaggctcttgcggaggcccgcaggattatctcacatttccag
catgacgcacctgctgccgccgctctgatacacaaggcagaagcagcgaataaggcaggc
gcttgtctagtgctggatgacccagggcgctgggcaactgcaatcgacatgtgtgagagt
ctgctcgagctgaagtgggtggtgagctccgttctcgaggagcagaaagctgctccaaat
ttagcggaccaccagtggcgcctcctccaagaactggtgccagtacttaagactgtgcgc
atcgctgcctccttcttgagcgaggacatcaatttgtccatctccgcccttatgccgtgc
ctgcatggtgtatctcgtgtcctagagcaacatatcgcagagaccagctgccctgtggct
cggggagtaatggagacggtgcggtcagggatggagcgacagtggagactgggtgaagag
gaagccttactagacagccctgccgtcctctcctctttcctggacccaaggtttaaggag
ctgcgcttcctcagcccacatgcacgtagtaggctgcacgacaaggtcaaggaactatta
tctgctcaagcacaaatagaggtggaggaaatgagcagagagtgtgacaaaggaggcgag
gatgaggatggcgaagagggaagggaaaaggaagtgaggaatcggggattggatcactca
cagtcaaccattgctcctctggattcacctgtgtcctgtgaatcaaatgaagagggggac
attattgtgctgcagcaacagttaaaggggctgtcccagactgccccgtcacaggtcagt
ggagagggactgggtgaaggctcacgctgcagtgctggaaatggtcccagaagagtagca
ggactgtctagcctgttaaaaggagacctgcagccccctgcttataggcaagtgagtcat
gtacccaaaagcatgtacgacatactgctaggagaggatcccactgagcgaatgccggag
atccaccaacagctggagaactacattgcagagccgctgtgcaaacgcagcctgtcacct
ctccactggtggcgctctaaggagcatcgcttccctgccgtggccagacttgcccgcaca
tttctggctatccctgctactgctgtgcctgcagacagggcctttgctcctagagagact
actgttgctcaacgcagggccattctggggccccagcatttagatcatattctattcctt
caccagaacagtgactatgtggagaaactgatgggagggtctacagggcatgaagagagg
ggcagtgacaggaatggagccaagcagactctgtatcagtctttagtgtcctatgagagc
aaggcttgggtgggaggggagaagttgtga
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