Oncorhynchus gorbuscha (pink salmon): 124007045
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Entry
124007045 CDS
T07892
Symbol
smarcad1b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1b isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124007045 (smarcad1b)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124007045 (smarcad1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
HHH_3
PRM2
CUE
T2SSK
Phage_N4_Gp2
Meth_synt_1
Motif
Other DBs
NCBI-GeneID:
124007045
NCBI-ProteinID:
XP_046173264
LinkDB
All DBs
Position
LG20:complement(22795072..22807990)
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AA seq
945 aa
AA seq
DB search
MNQRRFINNNTDSVNEDLTGQQTHDTVVPETPELKRPPGPGSVRGMESVVLDSDSDEEIS
GSSMMLSGKSLEKEPVMGSVIILSDEEGEEMKTTPRRNGSQLPQNIPGSQDPDRKRRLEV
CDSSQQSGASNSSKKPALEEDSVTDDSEDEGPEPSWKSQEDMVRKLQTKFPRLVKEELRE
VLLEHDWHFEDTLEALRMFSDEGERSSQGDTQASSSASSAPQASAHQAGPAAKPPGCPTS
LPHKPPSGTADKTISRPTKGADRRRRVIPESGTSSEDEASDDFDDCAEGVELNSDGSDQE
VGTGSLVKGQILRFFQEASLDELSLISGCSVKKAQRIVELRPFNEWENLLDALDRGNGLS
TDLVQGCRVVLRERDVVRSLMTKCEKIANKMMQDVTQVVERDKGSQKQPEILNGKYQLKP
YQLIGQNWLTLLHQNNLSGILADEMGLGKTIQAISFLASLYQEGNKGPHLLTVPASTLDN
WVRELNLWCPRLKVLVYYGSVEDRKYLRYDILNRQVDYNIIISTYALTTSNDNDRSLFRK
LKLEYAVFDEGHMLKNMSSLRYRHLMAINAKYRLLLTGTPVQNNLLELMSLLNFIMPDMF
SSSTAQLANMFAMKSSEEQSSFEMERISHAKLIMKPFILRRVKSEVLKQLPAKEEKVEFC
AMSDQQQQLYNALMQKLKGSTNGEKRELTNVMMQLRKMANHPLLHREHYTTTKLAAMSQL
MLKEPTHCEADPALIKEDMEVMTDFELHRLCLQYPSVQDYQLNTDMLLDSGKLSLLTQLL
ASLKNKGDRVVLFSQFTMMLDILEVFLKHLKHHYIRLDGSTPMSDRIVLIDQYNTELDIF
VFLMSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTRTVKVIKLISKDSI
EDGMLRIGQKKLKLEQDMTASQSQDGDEDSIPEDMASLLKASLGL
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaagaagatttatcaacaataacacagactcggtgaatgaagatctcacgggg
caacaaacacatgatactgttgtcccggagaccccagagctcaagcgtcccccagggccc
ggctcagtgagaggcatggaaagtgtggtactagactctgattcagatgaggagatatca
gggtcttccatgatgttgtcggggaagagtctggaaaaggaaccagttatgggttctgtt
atcatactgtcagatgaggagggagaggagatgaaaactactccacggagaaatggcagc
cagctcccccaaaacataccaggaagtcaagacccagaccggaagaggagactagaggtg
tgtgacagctcccagcagagtggggcatcaaactccagcaagaaaccagcccttgaggag
gattcagtgacagatgattctgaggatgagggtccagagcccagctggaagagccaggag
gacatggtgaggaaactgcagactaagtttccccgtctggtcaaggaggagcttagagaa
gtgcttctcgagcatgattggcactttgaggacaccctagaagcactgcgcatgttttca
gatgagggggagaggtccagtcaaggggatacccaggcatcatcatcagctagttcagcc
ccccaagcctcagcacatcaggcaggcccagcagccaaaccccctggttgtcccacatca
ctacctcacaagcctcccagtgggaccgcagataagaccatcagtaggccgaccaaagga
gcagacagaaggaggagggtgataccggagtcaggcaccagctctgaagacgaggccagt
gatgactttgatgactgtgctgagggcgtggagctgaactcggatggctccgatcaggag
gttggaacagggtctcttgtgaagggccagattctccggttcttccaggaggcatcgctg
gatgagctgtctctcatctctggctgctctgtgaagaaggcccagaggattgtcgagctg
cgcccatttaacgagtgggagaatctgttggatgctcttgacagagggaacggcctctcc
actgacctggtgcagggctgccgtgtggtcctgagggaacgggacgttgtgcgcagcctc
atgaccaagtgtgagaaaatcgccaacaagatgatgcaggacgtgacccaagtggtggag
agggacaagggctcccagaaacagcctgagatcctcaacgggaaataccagttgaagcct
tatcagctcattggtcaaaattggttgaccctgctccatcagaacaacctgagtggaatc
cttgctgatgagatgggtttggggaagaccatccaggccatctcgttcctagccagcctg
taccaggagggcaataagggcccacatctcctcactgtacctgcctccacactggataat
tgggtgcgggagctgaatctgtggtgtcccaggctcaaagtcctggtgtattatgggtct
gtggaggatcgcaagtaccttcgatatgatattctcaacagacaggtcgactacaacatc
atcatttctacgtacgctctgaccaccagcaacgacaacgaccgcagcctgttccgaaag
ctcaaactggagtacgccgtgttcgatgagggccacatgctgaagaacatgagctcgctg
cgctaccgccacctcatggccatcaatgctaagtaccgtctgctgctgactgggactcca
gtgcagaacaacctcctggagctcatgtccctgctcaacttcatcatgcccgatatgttc
tccagcagcactgcacagctcgccaacatgtttgccatgaaatcatcagaggagcagagc
agctttgagatggagaggatctctcatgccaaactgatcatgaaacccttcatcctcaga
cgtgtcaagagtgaggtgctgaagcagctcccagccaaagaggagaaggtggaattctgt
gccatgagtgaccagcagcagcagctctacaatgccttaatgcagaagctcaagggatcc
accaatggagagaagcgagaactgaccaatgtgatgatgcagttgaggaagatggcaaat
cacccactgctgcaccgggagcattataccactaccaaactggctgctatgagtcaactc
atgctcaaggagccgacccactgtgaagcagacccagcactgatcaaggaggacatggag
gtcatgacagactttgagctgcatcgactttgtcttcagtacccgtccgtacaagactat
cagctgaacacagacatgctcctggactcagggaaactcagcctgctcacacagcttctg
gcctctctcaaaaacaagggggatagagtggtgctcttcagccagttcaccatgatgctg
gacattctagaggtgttcctgaagcacttgaagcatcactacattcgactggatggatca
acgcccatgtctgacagaatcgtgctgattgaccagtacaacacagagttggacatcttt
gtgttcttgatgtctactaaggctggtggcctgggcatcaacctgacctcagccaatgtg
gtcatcttgcacgacattgactgcaacccctacaatgataagcaggccgaggaccgctgt
caccgtgtcggacagacaaggactgtgaaggtgattaagctgatcagtaaggactctata
gaggatggcatgctccgcatcggtcagaagaaactcaagctggagcaggatatgactgct
tcccagtcccaggacggagacgaggactcgataccagaagacatggcctcccttctgaag
gcgtcactggggctgtga
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integrated database retrieval system
