Oncorhynchus gorbuscha (pink salmon): 124007055
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Entry
124007055 CDS
T07892
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124007055
Membrane trafficking [BR:
ogo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124007055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
PH_13
DUF3618
C1_2
PHD_2
PHD
Motif
Other DBs
NCBI-GeneID:
124007055
NCBI-ProteinID:
XP_046173280
LinkDB
All DBs
Position
LG20:complement(11221187..11331156)
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AA seq
1791 aa
AA seq
DB search
MDSSPTRNGRQDAQNMELNRGEVPLYGQLEVCALLQIPDLEPEQTEFYVVLEGSRLAHVT
VGKRTEDGKSLCFTVPGHDLQETVSVTAYCHTEGRAKPCGGGAWLDYVCDLPQEVAEYLL
ANSDCLSPQSHLEVLSRVSAAPGEGNKEGDRSAGSGENYLGKTDKEDGYGGGRPRPDPEV
ECRLREMDERITQAMANLDYPLEWSGKASQPREGHQSRDTLLHLSVRLGLLSLSRFLIGQ
PRGQRALTLPNEEGATPLQLAQNGGDHTLFMALTTDLPTSLPYSPPVPVGVCTVWADRTC
VLRVCPGSGTLNLTFLGGPESSVMDNILVLREKLTDHNILRQISALRGDVQMEDSGRADV
HTSDTSDGGLGRGLVEDLTLVVRVLEEQLVLSLDDDEELPTLQTVKSQTAHPRGTQRQFS
HTAVADKSASIINGRSQLSTEVDDLKAKVSVAGVMRDSAVTDSRVWDTVDSEVLLQQATV
TPPPLPPYGLEEQQSPFVSSPLSSPADRALARLNSLSHSYLTNQRGSPPLESPNLSPSLV
ALMIDSEEEGVLVKSPFSPLTFDPRSSGDDTAPDLTCTRTHSASSASDPTPTKDMGDQKI
RHRSYSYSSPKISLLPSRFSRDTSAQPATSDLSPERREFSLSKQPQEKRELKFRKRAQSA
DDEGSVELAESLQHLTLSEFLKEIEEEEWDKYNIPSKVASEKYKVIRTFSFLKSRMSSTR
NKNKGKEKEREKEERDKDRQQNGHRFSTGSCAGPTVCLVCDKPATGKELLHCSSCTLMVH
KGCNDFAPPCLNKLVKNRTASLPQMRDSPSSCLIATSASLPMMSQRDRRETASLPNPLSS
SVPSSTDSRLSESPEVVSDRRWSPGRSEELLQTTESSSSTDSSLGEDCVDTGLHSDLAAD
ALDYEAESWSLTVEHKFCKKQDKRVVKRQDVIYELMQTEMHHLQTLCIMAEVFRRGMREE
VQLDAGAVGRVFPCLDELLLLHHDLFNSMRERRHSSAQPYGNRNYVIERIGDFLLQQFSE
ENAERMKQVYGDFCSHHTEAVTFFKELQQHNKRFQTFIKQQSNNYLVRRREIPECILLVT
QRITKYPVLLERILQYTQEDSEEHRDLSRALVLIKEVIAAVDLRVSEFEQGQRLQDVLNR
MDNRSAAKLKNGHTFRKQDVLVPGRTLKHQGLLLWKTATGRLKDVLALLLTDTLIFLQEK
DQKFIFAAVDQKPPVISLQKLIVREVANEERGMFLISASAAGPEMYEVHTSSKDERNTWM
RHIREAVESCPEDEEENTSESEEERRASEARAQKIHRLQENLSSQDHQICSTLEEKLQIY
ADLSALRGGTQEQHPEPRLLVQPHPEEVPRAAVLLTTALREAENLRTTLSSRTCSPSSLC
SPHRDPLSHPVSSANPPTPMDNPTDGEASPGDPDTRDGEWSASQGLILQSLTQSHTGDTN
NINLKVAQSVQSLTQLLYSLQAAVTIQDSFYEVQKLLLRESDRSGPCPLRPHPPCLQEQE
KYRNQEKRREEVAAAVRLQGQLRQERQRWERECQLRHSQQGELESRLEERERQCHLEAER
LKQEWEELEEQLGEYQQSLERLREGQRSVGKERERLETQQKLLQSWRHSRQRSLPVMVIP
LDGHQDSLPGQSGVHLDNAGSVFVNEAAFTTSKVLNNRHMHHRIQQHQRGGTLRYRDDPR
AHNSLNTILARSSQRHTLHQDTNTPQCWAGGADVTGYLYTTSGGQGTEHTPNDINTHSYV
RETWSSTATVAGQYQGAPHHGDHQLVLSSLVPLETESGDGEEGGEENIVYL
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atggatagtagcccaacaaggaatgggagacaagatgctcagaacatggagttgaacaga
ggagaagtgcctctatatggccaattggaagtgtgtgctcttctgcagattccagatcta
gaaccagaacagacagagttctatgtggttttagaaggttccagactagcccatgttact
gtagggaagagaacagaggatggaaagtctctgtgcttcactgttccaggtcatgacctt
caggagactgtctctgtcacagcttattgccacacagagggcagagccaagccctgtgga
ggcggggcctggctggactacgtctgtgatttgccacaggaagtggccgagtacctgcta
gccaatagcgactgtctgagtccccagagccacctggaggtcctgagtagggtttcagca
gctccaggggaggggaacaaggagggtgacaggagtgctggctcaggagagaactatctg
gggaagaccgacaaggaggatgggtatgggggtgggagacccagacctgatccagaggtg
gagtgtcgtctcagggagatggatgagaggataacccaggccatggccaacctggactac
cctctggagtggagcggcaaggccagccaacctagagaagggcaccagtccagggacact
ctcctccacctctctgtgcgtctgggtttgctcagtctctcccgcttcctgattggccag
cccaggggtcagagggcactgaccctgccaaatgaggaaggggccacacccctccagctg
gctcagaacggaggagaccacaccctcttcatggcgcttaccactgaccttcctacttca
cttccatacagcccccctgtccctgtcggggtgtgcactgtgtgggcagataggacttgt
gttctaagggtatgtcctgggtctggcacccttaaccttaccttcctggggggccctgag
agcagtgttatggacaacatcctggttctcagagagaaactgacggaccacaatatcctc
agacagatctcagcactgagaggtgatgttcagatggaggacagtggcagagcagatgtc
catacaagtgataccagtgacggaggtctaggcagggggctagtagaagaccttacactg
gtggttagagttcttgaagagcagcttgttctctctctggatgatgatgaggaacttcca
acattacaaacagtgaagtcccagacggcccaccccagaggaacccagagacagttctcc
cacactgctgtggcagacaaatcagcctccatcattaatggcaggagtcagctctccaca
gaggtggatgacctcaaggccaaggttagtgttgccggggtaatgagggacagcgctgtg
actgacagcagggtgtgggacacagtggactcagaggtcctcctccaacaggccaccgtc
acccctccacccctacctccctacggactagaggagcaacagtccccctttgtctcttct
cccttgtcctcccctgctgaccgagccctcgcccgactgaacagcctttcccactcatac
ctaaccaatcagagagggagcccacccctggagtcacctaacctcagccccagtctggta
gctctaatgattgacagtgaggaggagggggttctggtgaagtctcccttctctcctcta
acctttgaccctcgtagcagcggggacgacaccgccccagacctcacctgcacacgcaca
cactctgcctcctcagccagtgaccccacccccacaaaggatatgggcgaccagaagatc
agacaccgctcctactcctactcctcccccaagatcagcctgctgccctcccgcttctcc
cgtgacacctcagcccagcctgcgacatctgacctcagcccagaacggagagagttcagc
ctatcgaagcaacctcaagaaaaaagggagttaaagttccgtaagcgtgcccagtctgca
gacgacgagggcagcgttgagctggcagagtccctccaacacctcaccctctcagagttc
ctcaaagaaattgaagaagaggagtgggacaagtacaacatcccttccaaggtggcgtca
gagaaatacaaagtaattcgtaccttcagcttcctcaagagccggatgtcgagcacacgc
aataagaacaaggggaaggagaaggaaagggagaaggaggagagagacaaggacaggcag
cagaatggacatcgcttctccacggggtcctgtgctggacccacggtctgtctggtctgt
gacaaacctgctactggcaaggaacttctgcactgctccagttgtacactcatggtccat
aagggttgtaatgactttgctcccccgtgtctaaacaaacttgtgaagaaccgaacggca
tccctcccgcagatgcgagacagtccctcttcatgtctgatcgccacctcagcctctcta
cctatgatgagccagagggacaggagggaaacagcctccctccccaaccccctctccagt
agtgtcccctcttccactgacagcaggcttagcgagagtccggaagtggtgtctgacagg
agatggagtcctggccgatcagaggagctcctacagaccactgagtcatcctcctccact
gactcctccctcggagaagactgtgtggacaccggtctccacagcgacctggctgctgat
gctctggactacgaggctgagtcttggagtctgacagtggaacacaagttttgtaagaag
caggacaaacgggtggtcaagagacaggacgtcatctatgagttgatgcagacagagatg
caccacctccagactctgtgcatcatggctgaggtcttccggcgagggatgagggaggag
gtccagctggacgcgggcgccgtggggcgtgtcttcccctgtttggacgaactcctcctc
ctccaccacgacctcttcaactccatgagggaacgccgccacagctccgcccagccatac
gggaacaggaactacgtcatagaacgcatcggagactttctgctgcaacagttttctgaa
gagaacgcagagaggatgaaacaggtgtatggagacttttgcagccatcacactgaggca
gtcaccttcttcaaagagctacagcaacacaacaaacgatttcagaccttcatcaagcaa
caaagtaataactatttggtgcggaggagagagatcccagaatgcatcttgttggtgacc
cagaggataactaagtaccctgttctgttggagaggattctacagtacacccaggaggac
agtgaggagcacagggacctctccagagctctggttttgatcaaggaggtgatcgcggct
gtagacctgagggtcagtgagtttgagcagggtcagaggttacaggacgtcctaaaccgg
atggacaaccgtagtgctgccaaactgaagaacggacacacctttaggaagcaggatgtt
ctggtgccaggccggaccctcaaacaccagggcctgttactgtggaagaccgccaccgga
cgactcaaagatgtcctggctctccttctcaccgacacactgatcttcctacaggagaaa
gaccagaagttcatattcgctgctgtggaccagaagcccccagtaatctctctgcagaag
ctgattgtcagggaggtagccaatgaggagagagggatgtttctgatcagtgcatcggcc
gcgggtccagagatgtacgaggtccacacctcctcgaaagacgaacgcaacacctggatg
agacacatccgagaggctgtggagagctgtccagaggatgaggaggagaacaccagtgaa
tcagaggaggagagaagagcatctgaagccagagcccagaagatacatagactacaggag
aacctgtccagtcaggaccatcagatatgttctactctggaggagaagctacagatctat
gctgatctgtctgccctgaggggcggcacccaggaacagcaccctgagccacgcttactg
gtccagccacacccagaggaggtgccccgggctgcagtactgctcactaccgcactacga
gaggctgagaacctgaggaccactctgtcctccaggacctgttctccctccagcctctgc
agccctcacagggaccccctgtcccaccctgtgtcctcagccaaccctcctacccccatg
gacaaccccacagacggtgaagcctcacctggggaccctgataccagggacggagagtgg
tcagcctcccagggcctcatactacagtccctgactcaatcccacactggggacactaat
aatatcaaccttaaggtggctcagagtgtccagagcttgacccagttgctctacagtctg
caggcagcggtaaccatccaagacagtttctacgaggtacagaagctcctcctccgtgaa
agtgaccgctccggcccctgcccgctgaggccacaccccccgtgtctccaggagcaggag
aagtatcgtaaccaggagaagcgccgtgaggaggtggcagcagcggtgcggttacagggt
cagctgcgccaggagaggcagcggtgggagagggagtgccagctgcgccacagccaacag
ggggagctggagagcaggctagaggagagggagagacagtgtcacctggaggctgagagg
ctgaagcaggagtgggaagagctcgaagagcagctgggagagtaccagcagagcctggag
aggctgagggagggccagagaagcgtggggaaggagagggagaggctggagacccagcag
aagctgctgcagagctggagacacagccgacagaggagcctgcctgtcatggtcataccg
ctggatggtcatcaggactcacttcctggtcagtccggcgtccatcttgacaacgccggc
tcagtgtttgtcaacgaggcagcgttcaccacgtcgaaggtgcttaataaccgccacatg
caccaccgcatacagcagcaccagagaggtgggaccctgaggtacagagatgaccctcga
gcccacaacagcctgaacaccatactggcccgctccagccagagacacacgctccaccaa
gacacaaacacaccccagtgctgggcggggggtgccgatgtcactgggtacctctacaca
acctcaggtggacaggggacagagcacacacccaacgatataaacacacacagctatgtg
agggagacgtggtcctcgacggcaactgtggctggacagtatcagggtgcacctcaccat
ggtgaccatcaactggtcctctcctccttggtccccctggagacggaaagtggggatggg
gaggaggggggagaggagaacattgtgtacctctga
DBGET
integrated database retrieval system
