Oncorhynchus gorbuscha (pink salmon): 124007088
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Entry
124007088 CDS
T07892
Symbol
stard13a
Name
(RefSeq) LOW QUALITY PROTEIN: stAR-related lipid transfer protein 13
KO
K20632
deleted in liver cancer protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124007088 (stard13a)
Membrane trafficking [BR:
ogo04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
124007088 (stard13a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
START
SAM_2
Motif
Other DBs
NCBI-GeneID:
124007088
NCBI-ProteinID:
XP_046173334
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Position
LG20:36337133..36415298
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AA seq
1124 aa
AA seq
DB search
MERERTTDHDSGGESGSERACLEFMTPDGQDIYLRLGHSPQRRSALRLTRIIVRHQLLTR
LTQEIEAKEACDWLRAAGFPQYAQLYEDSQFPIDILSVKRDHDFLDRDLVEPLCRRLNTL
NKCCSMKLDVSHPRKKTDDSDDDDPLAISKRWTFEWNSRRWSRLQDMHFLLGSPNESSPE
GCQGEGRLRSTVSSESVLTDLSEPEITDISSLHSQDSLGAMLPDSVSMVSLAGPYQPPRD
LSHYNSLPIKSSRHGQGGRSPAKAFLRRMEMMRTWGPSSKRKSGSGRAPLVISGPVLHGE
EPQALQMLHCVPINQSEDSPHPPHQSDDNSSPIALGNGSKGQSVTMRPCVKESVSKPKRG
SMYLEDMELLSGAPHVRRIEAQQSPFSRNHFRSYEDLLVHIPKNHKPGTFPKALSIESLA
TATNHQYQTPSPSPLHPSKGSPWTGTALSKKPPCPGAPRGSRVSVYDNVPGSHLYASTGD
LLDVDRDDHLFPHLDDIISHVSGLQQIVDHWSRSMLTEGGVGEEGEAGEGKREERTTPSE
GEGEGRTMPSEGERDGVSLIDIESTGTRERRDSGVGASLTRPRXVLRWPSFRLSENLRQS
GSALQISSQSAGQLSLLQKFSLLRLTAIMENYSMSNKHGWTWSVPKFMKRLKVPDYKERS
VFGVPLIVHTQRCGYPLPLCLQQALRHLRTHCLDQVGLFRKSGVKSRIQALRQECETSPD
SVCYEDQSAYDVADMVKQFFRDLPEPLLTSKLGETFLHIYQYVPKEQRLQAVRAAILLMS
DENREVLQTLLCFLCDVTSCVEENQMTPMNLAVCLGPSLFHLNILKNDNLSPRSIQKKYA
TGRPDQKDLSENLAATQGLAHMITECQHLFEIPQDMVSRSHNSYMEAELLAPPLDELRKT
HDEEDEEEEEEEEEGSYHTHMEGLVQGLLKEARDNSKGWVSRATTDHTELACKKVGDGNP
LRRWRVCVEVCAKPSEVLERLLRERPLWQTDILQEKVLVTLGRQTDIYQYSLQSMAPHPN
TDYVVLRSWRSSISKGCCVLVCVSVDYEDSPAMVSVRGVILESQYLLEPHGTGKSRLTHI
CRVDLKGRSPEWYNKVFGHLCVSEAQRIRSSFLPPDLPGTETKI
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggagagggagaggacaactgatcatgacagtggcggagaaagtggtagtgaaagggcg
tgtctggagttcatgacccctgatggacaggacatctacctgaggcttggccactccccc
caacgacgctccgccctccgtctcacacgcatcatcgttcgccatcagctcctcacccgg
ctcactcaagagatcgaggccaaggaggcttgtgattggctgagggctgcagggttccca
cagtatgcccagctctacgaagactcccagtttcctatagatatcttgtcagtgaagagg
gaccatgacttcttggacagggacctggtggaacctctgtgtcgacgtcttaacactctg
aacaagtgttgctccatgaaactagacgtcagccaccccaggaagaaaactgatgattca
gatgacgatgacccgctagccatcagtaagagatggacctttgaatggaacagccgccgc
tggtcccgcctccaggacatgcacttcctgctgggctcgcccaatgagagcagtcctgag
gggtgccagggggaagggcgactgaggagcacagtgagcagtgagagcgtcctgacggac
ctgagtgaaccagagatcacggatatatcctctctgcacagtcaagactctctgggagcc
atgcttcctgactctgtctctatggtctcacttgcaggaccctaccagcccccaagagac
ctgtcccactacaactctctaccaatcaaaagcagccgtcacggccagggtgggcggagt
ccggcaaaggccttcctgcgtcgcatggagatgatgcgtacctgggggccgtcctccaag
aggaagtcaggaagtgggcgggcgccgctcgtcatcagtgggccggtcctacatggggag
gagccccaggcattacagatgctccactgtgttcccatcaatcaatcagaggacagtcct
catcctccccaccaatcagatgacaactcgtcccctatcgccctcggtaatggcagcaag
ggccaatcggtgacgatgcgtccctgtgtgaaggagtctgtctccaagccgaaaagagga
agtatgtacctggaagatatggagctgctctctggcgccccccatgttcggaggattgaa
gcacaacagagcccgttcagcaggaaccacttccgttcatacgaggacctgctggtccac
atccccaagaaccacaaaccaggcaccttccccaaagccttgtctatagagagtctagcc
acagccaccaaccaccagtaccagaccccttctccctccccactccaccccagcaaaggc
tccccctggacgggtacggctctgtccaagaagcctccctgtcctggagctccgcggggc
agcagggtgagtgtgtatgacaacgtccccgggtctcacctgtacgcgtccacaggtgac
ctgctggatgtggaccgagacgatcacctgttcccccatctggatgacatcatcagtcac
gtcagcggcctgcagcagattgtagaccactggagtcgcagcatgctgacggagggtggg
gtgggggaggagggggaggcaggggagggaaagagggaggagaggaccacgcccagtgag
ggggagggagaggggaggaccatgcccagtgagggagagagagacggggtctccctgatt
gacatagagtcaacagggaccagagagaggagagactctggagtaggagcttcccttacc
agaccacggtgagttctgcggtggccgagcttccgcctctctgaaaatctgcgccaatca
ggctccgcgctgcagatcagtagccaatcagcaggccagctcagcctgctccagaagttc
tctctgctccgactcacagccatcatggagaattactccatgtctaacaaacatggctgg
acctggtctgtccctaagtttatgaagcgtttgaaggtccctgactacaaggagagaagt
gtgtttggtgttcctctcatcgtccacacacagcgctgtggttaccctctacctctttgt
ctacagcaggccctgagacatctcaggacgcactgtcttgaccaggtgggtctgttccgt
aaatctggcgtgaagtctcgtatccaggcgttgagacaggagtgtgagaccagtcctgac
agtgtgtgttacgaggaccagtcagcgtacgacgtagcagacatggttaaacagttcttc
agagaccttcctgaacctctactgaccagcaagctgggagagaccttcctacacatctac
caatatgtccctaaggagcagaggttgcaggccgtgagggcggccatcttgctgatgtca
gacgagaacagggaagtgctccagacgctgctctgcttcctgtgtgatgtcacgtcctgt
gtagaggagaaccagatgacccctatgaacctggctgtgtgtctgggcccctccctgttc
cacctcaacatactgaagaatgacaacctgtcccccaggtcgatccagaagaagtatgct
acgggccgtccggaccagaaggacctgagtgagaaccttgccgccacacagggcctggct
cacatgatcactgagtgccagcacctgtttgagatcccacaggacatggtaagccggtcc
cataactcctacatggaggctgagttactagcgccccctctggacgagctgcgtaagaca
catgacgaggaggacgaggaagaggaggaggaggaggaggaaggatcctaccacacacac
atggaggggctggtccagggactactaaaagaggccagagacaacagcaaaggatgggta
tcccgggctaccactgaccacactgaattggcctgcaaaaaggtgggtgatggtaaccca
ctgcggaggtggcgtgtgtgtgtggaagtgtgtgcgaagcccagtgaggtgttggagagg
ctgctgcgggagcgccccctgtggcagacggacatactgcaggagaaggttctggttacc
ctgggcagacagacagacatctaccagtacagcttgcagagcatggccccacaccccaac
actgactacgtagtactgaggtcgtggcgtagcagcatttctaagggttgctgtgtgttg
gtgtgtgtatcagtggactatgaggacagtccagctatggtatcagtcagaggagtgatt
ctggaatcacagtaccttctagaaccccacggaaccgggaagtcccgactcacacacatc
tgcagagtcgatctgaagggcaggtctccagagtggtacaacaaggtgtttggtcacctg
tgtgtctctgaggcccagaggatccgttcctccttcctccctccagacctcccaggcaca
gagaccaagatctga
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