KEGG   Oncorhynchus gorbuscha (pink salmon): 124007105
Entry
124007105         CDS       T07892                                 
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124007105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ogo03041]
    124007105
Spliceosome [BR:ogo03041]
 Complex B
  Other components
   Prp19-related factors
    124007105
 Complex C
    124007105
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 zf_CCCH_4 Torus zf-CCCH_2 RRM_occluded Nup35_RRM_2 zf-CCCH zf-CCCH_4 zf-CCCH_10 RRM_YTH1 RRM_3 zf-CCCH_PARP12 zf-C2H2_16
Other DBs
NCBI-GeneID: 124007105
NCBI-ProteinID: XP_046173369
LinkDB
Position
LG20:31888918..31896670
AA seq 430 aa
MATSLGANTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEACQTCSKIKNVCQTCLLDLEYGLPIQVRDTGLSIKDDVPKSDVNKEYYTQN
MEREIGNSDGTRPVGLLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDTPEDKSITTLYVGGLG
DSITDSELRNHFYQFGEIRTTTIVQRQQCAFIQFATRQAAELAAEKSFNKLIINGRRLNV
KWGRSQGEGGRRDGRGGKDGRGEGLTEMGLKLEPVPGLPGALPPPPVDEDTPTNYFNLGP
NSAPPVMNISLPPPPGVAMPPPPGFGPPMFHSMDPMGMPPPMGMRPPGHVHYPSQDPQRM
GAHASRHGGS
NT seq 1293 nt   +upstreamnt  +downstreamnt
atggcgacgtctttaggagctaacacttacaatagacaaaattgggaagacgcggatttc
cccattctctgccagacatgtcttggagagaatccttatattcgaatgaccaaggagaag
tatggcaaggagtgcaagatatgtgccagaccattcactgtgttccgatggtgtcctggg
acccgcatgcgcttcaagaagacagaggcgtgccagacgtgcagcaagataaagaatgtc
tgtcagacctgcctgctggatctagagtatggcttgccaatacaggtccgagacactggt
ctgtcaatcaaggacgatgtgccaaagtcagatgtgaacaaggaatactacacacagaac
atggaaagagagatagggaactctgatggtacccggcccgtgggtctcctgggtaaggcc
cccagctctagtgacatgctgctgaagctagcccgcaccacaccttactacaagaggaac
agaccacatatctgctccttctgggtgaagggagagtgtaagagaggagaggagtgtcct
tacaggcatgagaagccaactgatccagatgatcccctggcagaccagaacattaaggac
cgttactatggtatcaacgaccctgtggctgacaagctgctgaagagagcctccaccatg
ccgagactggacactccagaggacaagtccatcactacactgtacgtgggggggctcgga
gactccatcacagactctgaactcaggaaccatttctaccagtttggggagatccggacc
accaccatcgttcagaggcagcagtgtgccttcatccagtttgccacccgtcaggctgca
gagttagctgccgagaaatcctttaacaagctcattatcaacggtcgcagactcaacgtc
aaatggggcaggtcccagggagaggggggaaggagggatgggagaggggggaaggacgga
aggggagaagggctgactgagatggggctgaagctggagccggtacctggactgcctgga
gcgctacctccaccgcctgtggatgaagacacccctaccaactacttcaacctgggcccc
aactcagctcctcctgtcatgaacatcagtctacccccaccccccggtgtggctatgccc
ccccctccaggctttgggccacccatgtttcactccatggaccctatggggatgccccct
cccatgggcatgaggccccctggccatgtccactacccctcccaggatccacagcgcatg
ggtgcacatgccagccgtcacggaggctcctaa

DBGET integrated database retrieval system