Oncorhynchus gorbuscha (pink salmon): 124007401
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Entry
124007401 CDS
T07892
Name
(RefSeq) tripartite motif-containing protein 3-like isoform X1
KO
K11997
tripartite motif-containing protein 2/3
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124007401
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124007401
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
DUF5128
Filamin
SGL
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
Invasin_D3
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
Mala_s_1-like
zf-RING_6
Baculo_PEP_C
Beta-prop_IFT122_1st
YtkA
CC149
Prok-RING_4
Apolipoprotein
FTR1_4HB
LRIM1_dimer
Motif
Other DBs
NCBI-GeneID:
124007401
NCBI-ProteinID:
XP_046173873
LinkDB
All DBs
Position
LG20:complement(38683467..38809740)
Genome browser
AA seq
766 aa
AA seq
DB search
MSVPMAQRETGGTSPVVRQIDKQFLVCSICLDHYHNPKVLPCLHTFCENCLQNYIPPESL
TLSCPVCRQTSILPEKGVSALQNNFFITNLMEVLQRDPECSRLEACSVLESVNAAAGKPF
CCPNHEGKVMEFYCESCETAMCLECTKGEHREHVTVPLRDVLEQHKTQLKTQLDAIRNRL
PQLTAAIELVGEISKQLTDRKNEAVTEISSTFEELERALQFRKTALINDLENIYSAKQKV
LQAQLSSLLQGKDHIQSSCSFTEQALSRGSATEVLMVQKQMSERVSAMARHDFPEWPHQN
AHLDCQVETEGLRRSLQNLGVLITTAAVGHTSVATGEGLRHAATGQHVSVTVTTKDKDGE
LVRTGNAALRATVTPVADGSRVVTEPEVTDNKNGTYEVGYTLRSEGEFSFALSLYGQPLR
GSPFRLQAVKPSDALPSPDDVKRRLKSPGGSAGHVRQKAVRRPSSMFSIKKKENPMEDEL
IHRVGTRGREKGEFTNLQGISASSNGRVVVADSNNQCIQVFSNDGQFKMRFGVRGRSPGQ
LQRPTGVTVDMNGDIIVADYDNRWVSIFSSDGKFKNKIGAGRLLGPKGVAVDRNGHIIAV
DNKACCVFIFQSNGKLVTKFGARGTSERQFAEKSGAHLNRSGPVFSPHFVAVNNKNEIIV
TDFHNHSVKVYSADGEFLFKFGSHGEGNGQFNAPTGVAVDTNGNVIVADWGNSRIQVFDS
AGSFLSYINTSADPLYGPQGLTLTSDGHVAVADSGNHCFKIYRYLQ
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcccatggcgcagcgggagacaggcggcaccagcccggtggtccggcagata
gacaaacagttcctggtctgcagcatctgtctggaccactaccacaaccctaaagtcctg
ccctgcctgcacaccttctgtgagaattgtttacagaactacatccctccagaatctctg
acgttgtcgtgtcctgtgtgtcgacagacgtccatcctaccagagaaaggagtatccgct
ctacagaacaacttcttcatcactaacctcatggaggtcctccagagggatccagagtgt
tcgaggcttgaagcctgtagtgtcctggagtcagttaatgctgctgcaggaaaacccttc
tgctgccccaaccacgagggcaaggtgatggagttctactgcgagtcgtgtgagaccgcc
atgtgtctggaatgtacaaagggagagcacagagagcatgtgaccgtccctctgagggac
gtcctggagcagcacaaaacccaactgaagacacagctcgacgccatacgcaatagactg
ccccagctaacagcagctatagagctggtaggggagatctccaagcagctgacagacagg
aagaacgaggcggtgacagagatcagcagtaccttcgaggagctggagagggcgctacag
ttcaggaagacagccctcatcaatgacctggagaacatatacagcgcaaagcagaaggtg
ctccaggcccagctctcctctctcctccaggggaaggaccacatccagagcagttgtagt
tttactgaacaggccctgagccgcggcagtgccacagaggtcctgatggtgcaaaaacag
atgagtgagcgggtttctgccatggcccgtcatgacttccctgaatggcctcaccagaac
gcacatctggactgtcaggtggagacagagggcctgcgtcgctccctccagaacctgggc
gttctcattactacggcagctgtaggccacacctccgtcgccacgggagaaggactacgc
cacgcagcaaccggacaacatgtcagcgtcaccgtgacgaccaaagacaaggacggcgag
ctggtgcggacagggaacgcagcgctgagggccactgtcacgccggttgccgacggaagc
cgcgtggtcacggaaccggaggtgacagacaacaaaaacgggacctacgaggtgggatac
acgctacggtccgagggggagttctccttcgctctgtccctctacggccagccgctacgg
ggcagtcccttccggctgcaggcggtcaagccctcggatgcgttgccgtctccggatgac
gtgaagaggaggctgaagagtcctggcgggtcagcgggtcatgtcagacagaaggctgtg
aggagaccctccagcatgttcagcatcaaaaagaaggagaaccccatggaggatgaactc
atccacagagtcggtactcgagggagagagaagggcgagttcaccaacctgcaggggatc
tcagcctccagcaacggcagagtggtggtagcagacagtaacaaccagtgtatacaggtg
ttctccaatgacgggcaattcaaaatgaggtttggggtcagaggtcgatcgccggggcaa
ctgcagagacccactggcgttaccgtggatatgaacggtgacatcatcgtggccgactac
gacaaccgatgggtcagcatcttctcctccgatgggaagttcaagaataagatcggggcg
gggcgtctgttgggccctaagggcgtggcagtggacaggaacggacacatcatcgccgtg
gacaacaaggcgtgctgcgtcttcatcttccagtctaacgggaagctggtcaccaagttc
ggcgccagggggacgtccgagagacagtttgcagaaaaaagtggtgcccatttaaataga
tctggcccggtgttcagtccacactttgttgcggtgaacaacaagaatgaaataattgtc
acagatttccacaatcattctgtgaaggtgtacagtgcggacggtgagttcctgtttaag
tttggttcccatggcgaggggaacggccagttcaatgcccccaccggagttgccgtggat
accaatgggaacgtcatcgtggccgactggggcaacagccgcatacaggtatttgacagc
gctggttccttcctgtcctatatcaacacatcagctgaccctctctacggcccccagggt
ctgaccctcacctctgatgggcacgtggccgtagccgattctggaaaccactgcttcaag
atctaccgctacctacaatga
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