Oncorhynchus gorbuscha (pink salmon): 124007412
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Entry
124007412 CDS
T07892
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04137
Mitophagy - animal
ogo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124007412
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124007412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124007412
03009 Ribosome biogenesis [BR:
ogo03009
]
124007412
04131 Membrane trafficking [BR:
ogo04131
]
124007412
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogo04147
]
124007412
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
124007412
Ribosome biogenesis [BR:
ogo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
124007412
Membrane trafficking [BR:
ogo04131
]
SNARE
SNARE associated proteins
Others
124007412
Autophagy
Aggrephagy
Other aggrephagy associated proteins
124007412
Exosome [BR:
ogo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124007412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_5
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
AAA_28
Vps4_C
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_7
AAA_18
ATPase
DUF815
ABC_tran
AAA_24
AAA_lid_PRS2_C
NB-ARC
TsaE
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
124007412
NCBI-ProteinID:
XP_046173901
LinkDB
All DBs
Position
LG20:complement(12193962..12262231)
Genome browser
AA seq
805 aa
AA seq
DB search
MASGGESKNDLSTAILKQKTRPNRLVVDESLNEDNSVVSLSQAKMDELQLFRGDTVLMKG
KKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDD
TVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPNPYCIVAPDTV
IHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGI
LLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGDSESNLRKAFEEAEKNAPAII
FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG
RFDREVDIGIPDATGRLEILQIHTKNMKLSDDVDLEQVANQTHGHVGADLAALCSEAALQ
AIRKKMDLIDLEDETIDAEVMSSLAVTMDDFRWALSQSNPSALRETVVEVPNISWEDIGG
LEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFIS
IKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVI
NQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRINILNANL
RKSPIAKDVDLDFLAKMTNGFSGADLTEICQRACKMAIRESIENEIRRERERQTNPLAME
VEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPTSSVPGA
GPSQGSAGGSGGTVFNEDNDDDLYG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggaggagaatcgaaaaatgatctatccacagcgattttaaagcagaagacc
aggcccaaccggttggttgtggatgaatctctcaatgaggacaacagtgtggtttctctg
tctcaggcaaagatggatgagttgcagctgttcaggggagacacagtgctgatgaaagga
aagaagagacgggagacggtatgcatcgtgctctctgatgacacctgctccgacgagaag
gtccgcatgaacagagtggtccgcaacaacctgagagtccgcctgggagatgtcatcagt
attcagccctgcccagatgtgaagtacgggaaacggatccatgttctgcccatcgatgac
actgtagaagggatcacagggaacctgtttgaggtctacctcaagccctacttcctggag
gcctacaggcccatcaggaaaggggacattttcctggtgaggggaggcatgcgtgcggtg
gagttcaaggtagtggagactgatcccaacccctactgcatcgtggccccagacactgtc
atccactgtgagggcgagcccatcaaacgagaggatgaggaggagtctctgaatgaggtt
ggctatgatgacattgggggtgtgaggaagcagctggcccagattaaggagatggtggag
ctgcccctgagacacccagcactgttcaaggccatcggcgtcaagcctccaaggggtatc
ctgctgtatggaccccctggaacaggaaagacactgattgcacgtgccgtggccaacgag
accggagccttctttttccttatcaatgggcctgagatcatgagtaaactggctggagat
tctgagagtaacctgaggaaggcctttgaggaggctgaaaagaatgcccctgccatcatc
ttcattgacgagctggacgccattgcaccaaaaagagaaaagacacacggtgaggtggag
aggcgcattgtgtcccagctcctcacactcatggatggcctaaagcagcgtgctcacgtc
atcgtcatggcagccaccaacaggcccaacagcattgaccccgccctgaggagatttggg
cgttttgacagggaggtggacatcggcatccctgatgccacaggcagactggagatcctc
cagatacacaccaagaacatgaaactgtccgacgacgtggacctcgagcaggttgccaat
cagactcatggccatgtgggtgctgacctggccgctctgtgctctgaagccgccctgcag
gccatcaggaagaagatggatctcatcgacctggaggacgaaaccattgacgcagaggtc
atgagctccctggctgtcaccatggatgacttcagatgggctctaagccagagcaaccct
tcagccctgagagagacggtggttgaggtgcccaacatcagctgggaggacatcggaggt
ctggaggacgtcaagagggaactccaggagcttgtacagtacccagtggagcacccagac
aagttcttgaagttcggcatgaccccgtccaagggcgtgctgttctacgggcccccaggt
tgtggtaagaccctgctggccaaagctatcgccaacgagtgccaggccaacttcatctcc
atcaaaggtcctgagctgctcaccatgtggttcggagagtccgaggccaacgtccgcgag
atcttcgacaaggctcgccaggccgccccctgcgtgcttttctttgacgagctggactcc
atcgccaaggcacgtgggggtaacgtgggtgatggtggcggagcggccgaccgtgtcatc
aaccagatcctgacagaaatggacggcatgtccagcaagaagaacgtcttcatcatcggt
gccaccaacaggcctgatatcatcgacccggccatcctgaggcccggaagactggaccag
ctcatctacatccccctgccagatgaaaagtcccgcatcaacatcctaaacgccaacctc
aggaagtcaccaatcgccaaggatgtggacttggatttcctggccaagatgaccaatggt
ttctctggcgctgacctgacagagatctgccagagggcctgtaagatggccatcagggag
tccattgagaatgagatcaggagggagagagagcgtcagaccaaccccttagccatggag
gttgaggaggatgaccctgtcccagagatccgtaaagaccactttgaggaggccatgcgt
ttcgcccgccgctcagtcagcgacaacgacatccgcaaatacgagatgttcgcacagaca
ttacagcagagcagaggcttcggcagcttccggttccccactagctctgtgccaggcgct
gggcccagccagggctccgctggtggtagcggtggtacagtcttcaatgaggacaacgac
gacgacctctatggttaa
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integrated database retrieval system
