Oncorhynchus gorbuscha (pink salmon): 124007432
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Entry
124007432 CDS
T07892
Symbol
lrfn4a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 4
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124007432 (lrfn4a)
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124007432 (lrfn4a)
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
SALM family
124007432 (lrfn4a)
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
124007432 (lrfn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
LRR_9
fn3
Ig_2
LRR_EndoS
LRR_14
LRR_LRWD1
LRRCT
Sp38
Motif
Other DBs
NCBI-GeneID:
124007432
NCBI-ProteinID:
XP_046173940
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All DBs
Position
LG20:complement(25119579..25131808)
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AA seq
920 aa
AA seq
DB search
MPKSESQISHPYSAPPHSKSSRRPSPKQHSLKGVHPEINRLSPIELKPKVTSPSLRPPAC
SMTPQTVVWLAVVTCSCVFSALLGPGVSAGETWGMVSICPFHCVCRNLSESLSTLCVNKG
LLFVPPDIDRRTVELRLADNFILEVGRVDFANMSGLVELTLSRNTIHALKPLAFADLQSL
RSLHLDTNRLTMVGPKDLSGLTNLQHLIINNNQLTNVSTEAFDDFLQTLEDLDLSYNNLR
KVPWEAIQNMASLHTLNLDHNLLDHIAEGSFGELYKLARLDMTSNRLQTLPPDPLFSRSQ
TGMVSPTPYNTVISLSFGGNPLHCNCELLWLRRLIRGDDMETCATPVHLAGRYFWSIPEE
EFTCEPPLITRHSNKLWVLEGQRATLRCRAIGDPEPIIHWISPDDRIVANSSRVHSYYNG
TLDVLVTRARDDGAYTCIAINAAGEATALIDLKIIPLPHRGNNTVPLTSPRGDPGSSDIS
SGRRGAGRKGGGGVVTVKNATEGESGDGDASEHLVGVLGATATSAQVRWVLGRATGPYLV
WMYQIQYNCTADDALVYRILPPTSNAFLLKNLVSGADYSLCVLAIFDDGLSTLATTKVLG
CTQFSTKEDFPECRSLQAHFLGGTLTIMVGGVIVVMLLVFTVAMMVRHRVCGDCRDEGHY
PAHHHDNFLPSKGEVDVYAQTNGNGRVMMVALPKGILGQKAKPLPSKNKPQAENKPRTTL
DSDQLSGEREAEEQGLEVGVRGKRFPPFTPESERVTLYYSPANTSQTLPHPRAHKALRHS
GKLKLRRSEERERDLDKMVGSRCSLDSEAPGEEGQLDDWRRGDRPPLGRTRSCSFDVGEI
TTTTCYSYAKRLSVIWTRRSQSVHGMLVQCASTASSASSMGSDQQPPALTHGYLHAFNTS
NSNSNTRVAAKAGNLEESVV
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaatccgaatcacaaatatcacacccatactcagctccaccccactcaaaatcc
tctcggaggccctctccaaagcaacactctctaaaaggggtccacccggaaataaaccgg
ttatctcctattgaactcaagccaaaagtcaccagcccttccctgagaccccctgcctgc
tctatgaccccacagactgtagtctggctggccgtggtgacatgctcctgtgtgttctct
gctctgctgggcccgggcgtgtccgctggagagacctggggcatggtctccatctgtccc
ttccactgtgtgtgccgaaacctctcagagtctctgagcacgctctgtgtcaacaagggc
ctgctgttcgtccctcctgacattgaccggcgcacagtggagctccgtctggctgacaac
ttcatcctggaggtgggcagagtggacttcgccaacatgtcaggcctggtagagctaact
ctgtccaggaacaccatccatgccctgaaacctctggccttcgctgaccttcagagcttg
cgttcacttcacctggacaccaaccggctgaccatggtggggccaaaagacctgtccggc
ctaactaacttgcagcacctcatcatcaacaacaaccagctgaccaacgtctccaccgag
gcatttgatgacttcctgcagacgctggaggatctggacctgtcctacaacaacctgagg
aaggtcccctgggaggccatccagaacatggccagcctgcacaccctcaacctggaccac
aacctcctggaccacatcgccgagggctccttcggagaactgtacaagctggctcgtctc
gacatgacgtccaaccggctgcagactctgccccctgaccccctgttctcccgctcccag
acaggcatggtcagccctaccccctacaacactgtcattagcctgagcttcggtgggaac
cccctgcactgtaactgtgagctgctgtggctgaggcggctgatccgcggggacgacatg
gagacgtgcgccactcccgtccacctggctgggcgctacttctggtccattccagaagag
gagttcacctgtgagcctccgctcatcacgcgccactccaacaagctgtgggtgctggag
ggccagagggccacgctgaggtgccgtgccattggagacccagagccaatcatccactgg
atctctcctgacgaccgcatagtagccaactccagccgtgtgcactcctactacaacggc
accctggacgtgctggtgacccgtgcccgtgacgatggggcatacacctgcattgccatc
aatgctgccggggaggctacggccctgatagacctgaagatcatccccctccctcaccgc
ggcaacaacactgtccccctaaccagccctcgaggggaccctgggtcatcagatatctcc
agtgggagaagaggggcaggccggaagggtggtggaggggtggtgactgtcaagaacgcc
acagagggagagagtggagatggagatgccagtgagcatttggtgggggtcctgggagcg
actgccacctctgcccaggtgcgctgggtcttgggccgggccactgggccatacctggtg
tggatgtaccagatccagtacaactgcactgcagacgacgccctggtgtacaggattctg
cctcctacaagcaacgcgttcctgctaaagaaccttgtgtctggagccgactacagcctt
tgtgtcctggccatctttgacgacgggctgtccaccctggccaccaccaaggtcctgggt
tgcacccaattcagcaccaaggaggacttcccagagtgccgttccctgcaggcgcacttc
ctgggcggcacactgacaatcatggtgggcggggtcatcgtggtgatgctgctggtgttc
accgtggcgatgatggtgaggcaccgcgtctgtggagactgcagagacgagggtcactac
cctgcccatcaccatgacaacttcctgccctccaagggagaagtggacgtttacgctcag
accaatgggaatgggagagtgatgatggtggctctgcccaaaggcattcttggccaaaag
gctaagcccctgccatcgaaaaacaaaccccaagcagagaacaagcccaggacaacgcta
gactctgatcagctcagtggagagagagaggctgaggagcagggcctggaggtgggcgtg
agggggaaaagattcccccctttcacccctgagagtgagagagtgacactgtactactcc
cctgccaacacctctcagaccttaccccatcccagagctcacaaggccctgagacactca
ggcaagctcaagctgcgccgctctgaggagagagagagagacttggacaaaatggtgggc
tccagatgcagcctggactctgaggccccgggggaggaggggcagttggatgactggagg
aggggcgatcgtccgccactcgggaggacacgcagctgctcctttgatgtgggcgagatc
accacaacaacctgctacagctatgccaagcgactgagtgtgatatggaccaggaggagc
cagtcggtgcacggcatgctggtccagtgcgcctcaacggccagttcagcgagcagcatg
ggcagcgaccaacagccccctgctctcacacatggctacctgcacgccttcaacacctcc
aactctaactctaacaccagagtggctgccaaagctggaaacctagaagagagtgttgtg
tag
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