Oncorhynchus gorbuscha (pink salmon): 124007480
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Entry
124007480 CDS
T07892
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124007480 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124007480 (exosc8)
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124007480 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
124007480
NCBI-ProteinID:
XP_046174042
LinkDB
All DBs
Position
LG20:37461834..37474925
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AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHRSFLKENCRPDGRELGEFRTTTLNIGSISTADGSALVKIGNTTVMC
GIKGELTSPAVDAPNKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSAVIQ
KEDLCIVKGKLCWVLYCDIMCLDYDGNLLDACLIALLAALQNARLPEVTVNKETEVPEVT
LENRRGLNIHKHPVGASFIVFDDSIMIVDPTAEEESLSTATITVVTDEEERLCALHKPGG
TSLSGEKLQDCISRATTRHREVRKLIDKVTQSDKTPK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggattcaaaactgctgagcccttggaataccaccggagttttctgaaagag
aactgccgtcctgatggaagggagctgggtgaattcagaaccacaacattgaatataggt
tctatatccacagcagacggctcagccctggtgaagattggaaacaccacggtcatgtgt
ggcatcaaaggggaactgacaagcccagcagtagatgcgcctaataaaggctacattgta
cccaatgtagacctgcctcctctgtgttcgtctcggttccgtcctggacctccaggagaa
caggctcaggccgccagccagttcatcgctgatgtcatagagagctctgccgtcatccag
aaagaggacttgtgcattgtgaaaggaaagctgtgttgggtcctgtactgtgacatcatg
tgtctggactatgacggcaacttgttggacgcctgtctcatcgccctgctggcagctctt
cagaacgcgcgtctcccagaggtgacggtcaacaaagagacagaggttcctgaggtgacc
ctggagaacaggagaggtctgaacatccacaaacaccctgtaggggcctctttcattgtg
ttcgatgactctataatgattgtcgaccccaccgctgaggaagagagcctgtctacagct
acaatcacagtggtaacagacgaggaagagcgactctgtgccctccacaagccaggcggt
acgtcattatcaggtgagaagcttcaggattgtatcagccgagccacgacgagacacagg
gaggtccgcaaactcatcgacaaagtcacacagagcgacaagacaccgaaataa
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