Oncorhynchus gorbuscha (pink salmon): 124007663
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Entry
124007663 CDS
T07892
Symbol
rbm39a
Name
(RefSeq) RNA-binding protein 39a isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124007663 (rbm39a)
Spliceosome [BR:
ogo03041
]
Common components
Common spliceosomal components
General mRNP proteins
124007663 (rbm39a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_occluded
DUF8400
RRM_7
PRP38_assoc
RBD_DEAH11
RRM_10
Motif
Other DBs
NCBI-GeneID:
124007663
NCBI-ProteinID:
XP_046174293
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All DBs
Position
LG21:complement(36851082..36919970)
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AA seq
534 aa
AA seq
DB search
MADDFDIEAMLEAPYRKDEIKHSSPNGHKEHSKKKKKSRSRSRDRKRSKSRDRKKSHDHK
RSRSHERKRSRSRERRRSRERSGRYRDHKTTFSGPKFNGGSRGKIGPPTVIKLSRRRSRS
RSPFKKEKSPVRQVFLGEMTQKSSIRQPIDNLTPEERDARTVFCMQLAARIRPRDLEEFF
SAVGKVRDVRMISDRNSRRSKGIAYIEFVEANSVPLAIGLSGQRLLGVPIIVQASQVMAE
KNRAAAMANNLQKGNAGPMRLYVGSLHFNITEEMLRGIFEPFGKIESIQLMMDSETGRSK
GYGFITFSDTECAKKALDQLNGFELAGRPMKVGHVTERTDASNASSFLDNDELERTGIDL
GTTGRLQLMARLAEGTGLQIPPAAQQALQMGGAIAIGAMAAVSAAMNPAMNMNMNTAMNL
PSQPLATHCFQLSNMFNPRSEDNPGWDVDIQHDVIEECNKHGGVVHIYVDKNSTEGNVYV
KCPSVPAAMAAVNALHGRYFAGKMITAAYVPLPTYHNLFPDSVKATQLLIPLAH
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgactttgacatagaagcaatgcttgaggctccatatcgaaaggatgagatc
aagcacagtagtccaaatgggcacaaggaacacagcaagaagaaaaaaaagagcaggagt
cgaagcagagacaggaagagaagcaaaagccgggatcgcaagaagagccatgaccacaag
cggagccgcagccacgagcgaaagcggagccgcagcagggagaggcgccggagcagagag
cgcagcggccgctacagggaccacaagaccaccttctctgggccgaaatttaatggtggt
tccagagggaagattggccccccaactgtcatcaagctaagccgaagacgttctagaagc
cgaagccctttcaagaaagagaagagtcctgtgaggcaagtgttccttggggagatgacg
caaaagagctcaatcaggcagccaatagacaacctgactccagaggaaagggacgctcgc
acagtgttctgcatgcagctggcagccagaatccgaccacgtgacctggaggagttcttc
tctgcagtgggaaaggtgagagatgtgcgcatgatctctgacagaaattcgaggaggtcg
aaggggattgcttacatcgagtttgtggaggccaactcggtgccactggctataggattg
tctggccagcgacttctgggggtgccaataattgttcaggcctcacaggtaatggctgaa
aaaaacagggctgctgccatggccaacaacctgcagaagggcaacgctggcccaatgaga
ctctacgtcggatccttacactttaacatcacagaggagatgctacgaggaatatttgag
ccctttggaaagattgagagtattcagctcatgatggatagtgagacggggagatccaaa
ggatatggcttcatcactttctcagacacagagtgtgccaagaaggctttggatcagttg
aacggctttgagctggctggccggccgatgaaggtgggccatgtgactgagcgcacagac
gcctccaacgccagctccttcctggacaacgacgagctggagaggacaggcatcgacctg
ggcaccactgggcgcctgcagctcatggccagactggctgaaggcacgggactgcagatt
cccccagcagcacagcaagccctgcagatgggtggggccattgctattggtgccatggct
gctgtatcagctgccatgaatcctgccatgaatatgaacatgaatacagctatgaaccta
ccctcacagccacttgctacacactgtttccagctgtctaacatgttcaaccctcggtct
gaagataacccaggctgggatgttgacattcagcatgatgtcattgaggaatgcaacaaa
catggaggagttgtgcacatatatgttgacaagaattccactgaaggcaacgtgtatgtg
aaatgtccatccgttcctgctgccatggctgcagtaaacgcattacatggtcgatatttt
gcaggtaaaatgatcacagcggcatacgtccctctcccaacatatcacaaccttttccct
gactctgtgaaggctacccagctcctgatccctcttgctcactga
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