KEGG   Oncorhynchus gorbuscha (pink salmon): 124007719
Entry
124007719         CDS       T07892                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1-like
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124007719
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ogo03041]
    124007719
   04121 Ubiquitin system [BR:ogo04121]
    124007719
Spliceosome [BR:ogo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    124007719
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    124007719
Ubiquitin system [BR:ogo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124007719
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 124007719
NCBI-ProteinID: XP_046174397
LinkDB
Position
LG02:complement(66055072..66063032)
AA seq 783 aa
MGSSKKHKEKGRDKDAEERHREHKKHRHKERDKERNVTREREKRKRSRSKERSGRGSERE
GRSKGERSAGEPRVKKEKVEAGYQESPGIGPQSASGDASLSIEETNKLRAKLGLKPLEMT
DTTKELGTKEQPMVAETINPVYIKQQTEMREKLAAMKEKRLLNKKLGKVKTLAEGDWLDD
TVAWVERSRKMAKEKELAEKRAKLLQEMDEEFGVSNLVDEEFGQTKKASYSSRDLKGLTV
QHRMESFNEGETVILTLQDQGVLEEEDDVLVNVGLVDKEKAEKNVELKKKKPDYKAYEED
ESVDDMATFKPRTVLGKYDEEIDGEKKKSFQLSKGGCAEGERERELQAIRETLRNQAQSL
EMPALAIASEYYTPQEMVGFKKTKQRVRKIRKKALPDELQLDDTRNTDFGSRVRGRGRRQ
LDEGQEVSKEGVIIPGLDVPQQSDDIRMADMDISDDEDFIPTEPAVLEEDEAEQDLQKQL
EKQRKLKQKQLEKQRKLKQKQLLQDSGEKVAEQVPWLARVDGSDDEDNKNNLNIVFNATS
EFCRTLGDIPTYGLSGNREDQEDIMDFEQEAARDGAGGSDSDEDENVGWSIVNVDEEQKQ
PDFSTASTTILDEEPIVSSGLAAALALCKNKGLLDTQMQKISRVRAPTGALPNDNYSIED
KMTIDDKYSRREEYRGFTQDFKEKDAYKPDVKIEYVDESGRKLTPKEAFRQLSHRFHGKG
SGKMKTERRMKKLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANN
ITK
NT seq 2352 nt   +upstreamnt  +downstreamnt
atggggtcgtcgaagaaacataaggagaaagggcgtgataaggatgcagaagagcgtcac
cgcgaacacaaaaaacaccgtcacaaggagagggacaaggaacgaaatgtcacccgagag
agggagaagaggaaacggtccagatcgaaggaaaggagcggacggggttccgagagagaa
ggtcgcagtaaaggcgaaaggagtgctggggagcctcgcgtaaagaaagaaaaagtggag
gccggatatcaagaaagtccaggaattggaccacagtctgcaagtggagatgcctcactt
agcattgaagagacaaacaagctgagggccaagcttggtctgaagcctctggaaatgact
gacacaactaaagagctcggtacgaaggagcagccaatggttgcggagacgatcaaccct
gtgtacatcaaacagcagaccgagatgagggagaaactggcggctatgaaggagaagagg
ctcctcaataagaaactggggaaagtgaagactttagcagagggagactggctggacgac
actgtagcttgggtggagaggagccggaagatggccaaagagaaagaactggcagagaag
agagccaaacttctgcaggagatggatgaggagtttggtgtgagcaatctggtggatgag
gagtttggccagaccaagaaggcctcttacagctctcgggacctaaagggtctcactgtg
cagcataggatggagtcatttaatgaaggggagactgtcatcctcacactgcaagaccaa
ggtgtgcttgaagaggaggatgatgtacttgtaaacgtgggtctagtggacaaagaaaag
gctgagaagaatgtggagttgaagaagaaaaagcctgattacaaagcttacgaagaggac
gagagtgttgatgacatggctacgttcaagccgcgcactgtgctgggtaagtatgatgag
gagattgatggagagaagaagaagagtttccagctgagcaaagggggctgtgctgagggg
gaacgggaacgggagctgcaggccatccgggagactctgaggaaccaggcccagtccctg
gagatgcctgctctcgctattgcctcagagtactacacaccacaggagatggtgggcttt
aagaagaccaagcagcgtgtcaggaagatcaggaagaaggcgttgcctgacgagctccaa
ctagacgacacgcgcaacaccgacttcggctccagggttcggggtcggggtcgcaggcag
ttggatgagggccaggaggtgtcaaaggagggtgtcatcataccgggactagatgtaccc
caacagtcagatgacatcaggatggcagacatggacatcagtgacgatgaggacttcatc
cccactgagccggctgtgctggaggaggacgaggcagagcaagatctgcagaagcagctg
gagaagcagaggaagctcaaacagaagcagctggagaagcagaggaagctcaaacagaag
cagctgctccaagactctggggaaaaggtggcagagcaggtcccatggcttgcaagagtg
gacggcagtgacgacgaagacaacaagaacaacctgaacattgtatttaatgccacctct
gagttctgcagaactctgggtgacatccccacctacggtctgtcaggaaacagagaggac
caggaggatatcatggatttcgaacaggaggcggcgagagatggggccgggggttcagac
tcggatgaggatgagaatgttggctggagcatcgtcaacgtggatgaggaacagaagcag
cctgatttctccacagcatcaaccaccatcctggatgaagaacccattgtcagctctggg
ctggctgccgccttggcgctgtgcaagaataagggtctcttggacactcaaatgcagaag
atatcccgtgtccgtgctcctaccggtgccctgcccaatgataactacagcattgaggac
aagatgactatagatgacaagtacagtcggagggaggaatatagaggcttcacccaggac
ttcaaggagaaggacgcctacaagcctgacgtcaagattgagtatgtggatgaatctggg
cggaagctcactcccaaagaggctttccggcagctctcacatcggttccatgggaagggg
tctggcaagatgaagactgagaggaggatgaaaaagctggaagaggaagcgctgctgaag
aagatgagcagtagtgatacccctctaggaacggtcgctttgcttcaggagaaacagaag
tcacaaaaaacaccttacattgttctgagtgggagtgggaagagcatgaatgcaaacaac
atcaccaaatag

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