Oncorhynchus gorbuscha (pink salmon): 124007724
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Entry
124007724 CDS
T07892
Name
(RefSeq) DENN domain-containing protein 4C-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124007724
Membrane trafficking [BR:
ogo04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
124007724
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
CA109-like
Motif
Other DBs
NCBI-GeneID:
124007724
NCBI-ProteinID:
XP_046174403
LinkDB
All DBs
Position
LG21:complement(26300022..26375037)
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AA seq
1969 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINKSAGETVPEGFT
CMESTYSGQQANLNHGSLKSHELFLCYKRDRDKPPLIDIGVLYEGKERLIQGCEVIQATP
YGRCANVNNSSATSQRIFITFRRAPPVQPQNSLAVTDICVIVSSKGETPPHTFCKVDKNL
NCGMWGSSVFLCYKKSVSASNSINYKAGLIFRYPEDDYESFPLSESVPLFCLPMGAKIEC
WAPNTRYPLPVFSTFVLTNSSGEKMYGAAIQFYEVYPIDLLSEKQKVQLGLLTTVEKKVI
PNRTVNTNKCICLLSRWPFFESFRKFLMFLYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLMLAQPVCTPLPLSGADYSTLLMNLGSENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPFPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRHSNWKNLPKKPCKSLFNSLANLHHQLGIVRRTAQEGLAVEM
TPIEADFTWHKKMTSLEMEIQEALLRFMANILKGYRSYLKPITQAPSEKATSADSLYDLQ
GFLRSRERTHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCIEKLFPSDKGNDKG
TKVEGESSEDTKLMELDESQKSEHTVFVMPPEPPATEEGSDPPAHYSYKSFPRLCMDLFD
RPREVIPALRSSTPGASLSSSPALLAKRTKQEIKLAYKMAKRFYSNPPLWAKCLFSHCYS
LWFICLPVGVRLAQSKSWAMQQAYNVLLKMRTSEVEVLDEVCYRVVMQLCGVYGQPVMAV
RVLVEMKKAGVHPNAITYGYYNKAVLEGPWPSRNRSGLFMWAKVRNVARALSQFKQAVHR
MPSMEGPTVITTGSDLGPSAGGLASSDGDRLSHGSADSSSEANGEDHTLFARSLIIADTA
DNHCSRGVQPDQGYGSKDELHQDLVDLAQSAALVIAVDQCSKSAAQHNGGDIAGSVDSAV
AVAEPPSPVKALPHVPSIVKLSTGASFDTAMKRGDAAPGKLFSLRSQSEDISLPVEGRSA
APGGSGVAGPAVQVQRQKAFSERSCSFSAESRAGMLMEKHGVDHIVSRMGADARILEAAL
SGGGTTPPPSKPLPSAAKALFKDLELESEGRGPMLGKLSEEEGPVTDPTPLEEGLGKEEK
RMKGDRKEAGVEDEMGLKLEEEDEERDSGGRGSISLPTLEIKEVQVGADPLSLLVSEHEE
LASVTSQELPQSLPAMVSRNLADEIEMYMSLRSPLGPKSCSMELHQEGQGGDPSPDAAPV
KQPQERRSSLPVPPVKHPGGSSGDTTPKRSPAAVTRSKTFAVKASRSPATSRGVVASPRS
SPLTALVRSSQSGSLGSVINSISGMKMDTLLSGPKIDVLKSGMKQAGNLASKVWGAVASA
YSYSDDEDELGPGYRERDSFPARLDESMLLGGGGSDSPTHRGPTQGLVSNGLTQSSTSLG
SSSGSSDTGRGPHSTHVTPGRPGRGPDSERSDQGSHHTSSSSIYQNCALEVLMSSCSQCR
SCECLVYDEEIMAGWTADDSNLNTTCPFCRTAFLPLLHVEFHDLRTTTAFYLNPSASGDS
IHSQQATATGSTENKVGAAMDTPTPGLISFPESEDPGEAPASQTATHKSLIPEPAQSDPL
GLLEHQAGKRGTSLTRSNSVGGPLQSLVAQREPGHSVSTTSLPCSLTEMDGLGQKRPNPM
PVSVPYLSPLVLRKELETLLENEGDQVIYTHKFLSQHPIIFWNLVFYFQRLDLPSYLPGL
ILTSEHCNNGVQLHQTSLSQDSKQVYVQLLWDNINLHQEPGEPLYQSWRTLMEKKGTLAP
TDYQETRTLLNSIVRSIQTNDVYGPINLLLREVKRNPEVKRQRGIYREILFLALVALGRE
NIDVEAFDREYRLAFDELSPEQIKALHKIDRPPNTNVQWCLKCFGAPVI
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggacaagggccaccgtgtgaccgactactttgtggtggccgggctgacggac
aagtccacgcccctggagcaggacctgtcggagaccaagtccagcgggcctaaggcgccc
attactgacctggccgtcatcaacaagtcggcgggagagactgttcccgagggcttcacc
tgcatggagagcacctacagtgggcagcaggccaacctcaaccacggcagccttaagagc
cacgagctgttcctctgctacaagagggaccgcgacaagcccccgctcatcgacattggt
gtgttatacgaagggaaggagcgtctcatccagggctgtgaggtcattcaggccacgccg
tacggccggtgtgccaacgtcaacaacagctctgccacctcgcagcgcatcttcatcacc
ttccgccgcgcgccgcccgttcagccccagaactcactggccgtcaccgacatctgcgtc
atcgtcagtagcaagggcgagactccgccgcacaccttctgcaaggtggacaagaacctc
aactgtggcatgtggggctccagtgttttcctgtgctacaagaaatcagtgtccgcgtcc
aactccatcaattacaaagccggcctcatcttccgctacccagaggatgactatgagtcc
ttccccctgtctgagtctgtgcccctgttctgcctccccatgggggctaagatcgagtgc
tgggcccccaacacacgctaccctctgcccgtcttctccacctttgtgttaaccaactcc
tctggggaaaagatgtacggcgcagccatccagttctacgaggtctaccccatagatctc
ctcagtgagaagcagaaggtgcagctgggcctgctcaccaccgtggagaagaaggtgatc
cccaaccggacagtcaacaccaacaagtgcatctgcctgctctcccgctggcccttcttc
gagtctttccgcaagttcctcatgttcctctacaagctgtccgtctcgggtccccacccg
ctgcccatcgaaaagcacatctcgcactttatgcacaacgtgtccttcccttcacctcag
aggcccagaatcttggtccaactctctgcacacgacaccttgatgctcgcacaacctgtg
tgtactcctctccctctcagtggggcagactacagtacgttgctgatgaacctgggctct
gagaactgtgccacgctgctgcactttgtcctgctggagagtaagatcctgcttcactcc
ctgagacccgctgtactcaccggggtagcagaggccgtagtggcgatgatcttcccgttc
cagtggcagtgcccgtacatccccctctgcccgctctccctggcgggggtcctcaatgcc
ccctttcccttcatcgtgggtgtggactcccgctactttgacctttatgaccccccgccg
gacgtggtctgtgtggacctggacaccaacactatttacctgtctgatgaaaagagacac
agtaactggaaaaacctcccaaagaaaccctgcaagagcctgtttaactccctggccaac
ctgcatcaccagctgggcatcgtgcgtcggacagcccaggagggcttggcggtggagatg
acccccatcgaggcggacttcacctggcacaagaagatgacctccctggagatggagatc
caagaggccctgctgcgcttcatggccaacatcctgaagggctaccgctcttacctcaaa
cccatcacccaggccccctccgagaaggccacctccgcagactcactatacgacctacag
gggtttctgaggagcagggagcgcacccaccagaagttctactcccagctgaccaagact
cagatcttcatccgcttcattgaggagtgcacgttcgtcagcgacaaggatacgggcctg
gccttcttcgacgactgcattgagaagctatttccctccgataaaggcaacgacaaaggc
actaaggtggagggtgagtcctcagaggacaccaagcttatggaactagacgaatcacag
aagagcgagcacactgtcttcgtcatgcccccagaaccccccgccaccgaggaagggtcc
gacccccctgcccactacagttataagagttttccacggttgtgtatggacctgtttgac
cgccccagggaggtgataccagcactgaggagtagtacacctggggccagcctgtccagc
agccctgcactactggccaagcggaccaagcaggagatcaagctggcctacaagatggcc
aagcgcttctactccaaccctccgctgtgggccaagtgtctgttcagccactgctacagc
ctgtggttcatctgcctgcccgtgggggtgaggctggctcagtccaagagctgggccatg
caacaggcctacaacgtcctgctcaagatgaggacatctgaggtggaggtgctggatgag
gtgtgttaccgtgtagtgatgcagctgtgtggcgtgtacggtcagcctgtcatggccgtc
cgtgtcctggtggagatgaagaaggcaggggtgcaccctaacgctatcacctacggatac
tacaacaaggctgttctggaaggcccctggcccagtcggaaccgcagtgggctcttcatg
tgggccaaggtgcgcaacgtggcgcgcgctctctctcaattcaaacaggcagtccaccgg
atgccctccatggaaggacccaccgtcatcacgacaggaagtgatttaggcccgtcagcg
ggcggcttggcgagcagcgacggcgaccggctgagccacgggagtgcagacagctccagc
gaggcaaacggagaggatcacaccctgttcgcacgcagcctcatcatagcagacactgca
gacaaccactgcagcagaggagttcagcctgatcaaggctacggctctaaagatgagttg
caccaggacctagtggatttggctcaatcagcagcccttgtaatcgctgtggatcagtgc
agcaagtccgcagcacagcacaacggtggggacatagctggctcggtggacagtgcagtg
gctgtagcagagccccccagccctgtgaaagcactcccacatgtccctagcatcgtcaaa
ctgtccacaggggcgagttttgataccgccatgaagagaggagacgctgcccctgggaag
ctgttctctctgcgcagccagagcgaggacatctccctgccggttgagggtaggtctgca
gctccgggtggctccggggtggcggggcctgcggtccaggtccagcgccagaaggccttc
tcggagcgcagctgcagcttcagtgccgagagccgtgccggcatgctgatggagaaacat
ggtgtggaccacatcgtcagccgcatgggcgccgatgcacggatcttggaagcggctctc
tctgggggcggcaccacccccccaccttcaaagccgcttcccagtgcggccaaagccctc
tttaaggacctggagttggagtctgaggggcggggtccgatgctggggaaactatcagag
gaggaggggccagtaacggacccaaccccactggaggaggggttagggaaagaggagaag
aggatgaaaggtgaccggaaggaggcaggagtggaggatgagatgggtctaaagttggag
gaggaagatgaggaaagagattcaggggggaggggctctatttctctgccaaccttggag
attaaggaggtgcaggtaggggcagaccccctctccctccttgtctcggagcatgaggag
ttagcctccgtaaccagtcaggagctgccgcaatccctgcccgccatggtgtcccgaaac
ctggcagacgagattgagatgtacatgagcctccggagcccgcttggccccaaatcctgt
agcatggagctccaccaggagggccagggaggggacccttccccagatgctgccccagtg
aagcaacctcaagaacggaggtccagcctccccgtgccccctgtcaaacacccagggggg
tcaagcggggacacaacgcctaaacgcagccccgcagcagtcacgcgctccaagaccttc
gccgtgaaggcctccagaagccctgcaacttccaggggtgttgtggccagcccaagatca
tcgccgctgactgcgctggtgaggtcgtcgcagagtggttcgctggggtcggtcatcaac
tccatctcgggcatgaagatggacaccctgctctcgggtcccaagatagacgtgttgaaa
tcaggcatgaagcaggcagggaacctggccagcaaggtgtggggcgctgtggcctcagcc
tactcttactctgacgacgaggatgaactgggccccggctatagggaaagggacagtttc
cctgccaggctggatgagtccatgctgttggggggtggaggaagtgacagtcccacccac
agagggcccacccaaggcctggtgtccaacggcctgacccagagcagcaccagcctgggc
agcagcagtgggagcagtgacacagggagaggaccccactccacacacgtgactccagga
aggccaggcagaggtccagactctgagaggtcagaccaaggctcccaccacaccagctcc
tctagtatctaccagaactgtgcccttgaggtgctgatgtccagctgctcccagtgtcga
tcctgtgagtgtctggtatacgatgaggagatcatggcgggctggacggcagacgattcc
aacctcaacaccacctgtcccttctgccgcaccgccttcctgcccctgctccacgtcgag
ttccacgacctgcgcaccaccacagcgttctacctgaaccccagcgcatcaggagacagt
atccacagccagcaggccacagctacaggctccaccgagaacaaggtaggggctgcaatg
gacaccccgacccctggcctcatcagcttcccagaatctgaggacccaggagaggccccg
gcaagccagactgctacgcacaagagtttgataccggagccggctcaatcggatcccctg
ggcctgctggagcaccaggcagggaaaaggggaacgtctctgacacgcagcaacagtgtg
ggcgggcctctacagagcctggttgcccagagagaaccaggacacagcgtgtccaccacc
agcctgccctgcagcctgacagagatggatggcctgggacagaaacggcccaacccaatg
cccgtgtctgtgccctacctcagccccctggtcctccgcaaagaactagagaccctactg
gagaatgagggagaccaagtcatctacacccacaaattcctgagccagcaccccatcata
ttctggaacctggtgttttatttccaacgcctggacctgcccagctacctgcctggcctc
atcctcacctcggaacactgtaacaatggagtacagctccaccagacatccctgtctcaa
gacagtaaacaggtgtatgttcagctgctgtgggacaacatcaatttgcaccaggaacct
ggggaacccctctaccagagctggaggaccctgatggagaagaagggcaccctggccccc
actgactaccaggagacacggaccctcctcaacagcatcgtccgcagcatccagaccaac
gacgtctatggccccatcaacctgcttctccgggaggtcaagaggaacccagaggtcaaa
cgccaaaggggtatctatcgagagatcctcttcctggcgctggtggcattgggacgggag
aacattgacgtcgaggcttttgaccgtgaataccgcctggcctttgatgagctgagccca
gagcagatcaaggccctgcataagatcgaccggccacccaacaccaacgtccagtggtgc
ctcaagtgcttcggtgctccagtcatctga
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integrated database retrieval system
