Oncorhynchus gorbuscha (pink salmon): 124007729
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Entry
124007729 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03015
mRNA surveillance pathway
ogo04261
Adrenergic signaling in cardiomyocytes
ogo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124007729
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
124007729
09158 Development and regeneration
04382 Cornified envelope formation
124007729
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124007729
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124007729
03036 Chromosome and associated proteins [BR:
ogo03036
]
124007729
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124007729
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124007729
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124007729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_5
EF-hand_6
EF-hand_1
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
124007729
NCBI-ProteinID:
XP_046174414
LinkDB
All DBs
Position
LG21:complement(53558112..53609339)
Genome browser
AA seq
1074 aa
AA seq
DB search
MLQQAAVPFSPIFGNDQPPRYEDVVQNPPLPKSRDILPPSSLAPDSSLSLSTTPETAGRH
KVQTNGLQHTHTLSHTHTPSPHTHTLSVSTPPSQAHTPSLQTHTPSERTHTPSISPMEAL
FIEEDADLGRGLDRASRHTHSHTPTRSLTHTHSRNGTAFSPHTPPSSAHTHLSPNLSHVH
VTHTLQSAGEDLTCPSTSEHTPPVTHRDHDIDRLLMDLECLSQSMGRERDQVREGERERE
AEPPLPVKTRQRGTGQGNTSPQTQHCLKTQTQINPQAQRPFPVSHLTANAQATRSTPSSP
APPPQAEGSMAGLGDEEDGVLLLRILESIESFAQELVDSGGSPGNTGKTGAQSKEKEVMR
LLQDTLATAAKTDTLTQAKLPGSPPAGQDGPVHVSASTPTPAPRLTDGPVSTAPTPVPAP
IPTTLAESVSTAPTPVPAPIPTTLAESVSTAPTPVPAPIPTTLAESVSTALTPVPAPIPT
TLAESVATDQATPSAPIPTPVPPTTVVPSESADGHQHPPVADLTAVLTTTATPPPSPVPP
PTPTPGEAPVATIAAPPVAVRHPVAPSDVVALRDIGSTLLIQQTPEVIRVQSNKQDKKSG
TPPPAPLSPTPSVPPPTSPSPPPTPVVLTPPPPPPPALNIPRFYYPRGLPGVTKVNHDAA
ITAIETAFTEFEEEKADIYEMGKIAKACGCPLYWKAAMFNGAGGERTGFVSVHSFIATWR
KLLHSCYDDSSKFIYLLAKPGCSYLDQEDFIPLLQDIVDTHPGLTFLKDAPEFHSRYITT
VIQRIFYVVNRSWTGRITMTELRRSNFLQTLALLEEEDDINQITDYFSYEHFYVIYCKFW
ELDTDHDLYIDPKDLARYNDHASSSRIIERLFSGAVTRGSSVQREGRMSYAEFSWFLISE
EDKKNPTSIEYWFRCMDTDGDGVLSMFELEYFYEEQCSRMEGMGIEPLPFTDLLCQMLDL
VKPESQGKITLSDLKRCRMAHIFFDTFFNLEKYLDHEQRDPFALQKDIDNECPEPSDWDK
YASEEYEILVAEETANEQLQEGTFDDDYEEAELPVQGEMVGNKMDKLLISDLSA
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcaagcagctgtccccttctcacccatatttgggaatgatcaaccgccacgg
tatgaggacgttgttcagaaccctcccttacccaagagcagggatatactgccaccctcg
tcactcgctccagactcttctctctctttgtccactacgcctgagacagcagggagacat
aaggttcagaccaacgggctgcagcacacacacactctgtcacacacacacactccctca
ccgcacacacacacgttgtccgtttctacccctccatcccaggcacacacaccttccttg
caaacgcacactccgtcagagcgcacacacactccgtccatctcccccatggaggctctc
ttcattgaagaggacgcagacctggggagggggctggacagggcttccagacacacacac
tcacacaccccgaccagaagcctcacacacactcacagtcggaacgggacagcttttagt
ccacacacaccccccagctccgcgcacacacacctcagccccaatctgtcacacgtacac
gttacacacacactccagtctgctggtgaagacctcacctgcccctcaacttccgaacac
acccctcctgtcactcatagagaccacgacatcgacaggcttctgatggacttggagtgt
ctgtcgcagagcatgggtcgggagagagaccaagtcagagagggagagagagaaagagag
gcggagccccctctccccgttaagaccagacagagggggacaggacaggggaacacctcc
ccacaaacccaacactgtctcaagacacaaacccaaatcaacccccaggctcaaaggcct
tttcctgttagccacctaaccgctaacgcccaggccacgaggtcgacccccagctcgcct
gctcctcctccacaggcagagggcagcatggcggggctgggagatgaggaggatggggtc
ctgctgctgaggatcctggagagcattgagagctttgcccaggagctggtggactctggg
ggtagtcctgggaacactgggaagactggggctcagagcaaagagaaggaggtgatgaga
ctcctacaggacactctggctactgcagccaagactgacactctgacgcaggccaaacta
cctggatctccacccgctgggcaagatggacctgtacatgtgtctgcctccacaccaaca
cctgcacccagacttacagatggacctgtctctacagctcccacacctgtccctgcccct
atccccacaaccctagcagagtctgtctctacagctcccacacctgtccctgcccctatc
cccacaaccctagcagagtctgtctctacagctcccacacctgtccctgcccctatcccc
acaaccctagcagagtctgtctctacagctctcacacctgtccctgcccctatccccaca
accctagcagagtctgtcgccacagaccaagctacaccttctgcccctatccccacacct
gttccaccaactacagtcgtaccttcagaatcagccgatggacatcaacatccacctgta
gctgacctgacagctgtacttaccaccacggccacccctccaccctcccctgtcccgccc
cctacacccacacctggagaggcacctgttgcaaccatcgctgctcctcctgttgccgtg
agacacccggttgcccctagcgatgtggttgccctgagagacatcggctcgacgttgctc
atccagcagacgcctgaggtgatcagagtccagtccaacaagcaagataaaaaatctggc
acccctcctccagcccctctctcccccaccccctccgttcctccccccacctccccctct
cctccccccactccagtcgtcctcacccctcctcctcctcctccccctgccctcaacatt
ccccgcttctactaccctcgagggttaccgggggtaacaaaagtcaaccacgatgcggcc
atcactgccatagaaacagccttcaccgagtttgaggaggagaaggctgatatttacgag
atgggcaagatcgctaaggcatgtggctgtcctctgtactggaaggcagccatgtttaac
ggagcgggaggagagaggaccggcttcgtctctgttcactccttcatcgctacctggaga
aagttgttacatagttgctatgacgattcgtctaagtttatctacctcctagcgaagcct
ggctgttcctacctggaccaggaggacttcatacctttattacaggacatagtggacact
cacccaggactgacgttcttgaaggatgccccagaattccattcccgttacatcaccacc
gtgattcagcggatattctatgtggtcaaccgctcgtggacaggtcgcatcaccatgacg
gaactacgcaggagcaacttcctgcagaccctggccctgttggaagaggaggatgatatc
aaccagataacagattatttctcttatgagcatttctatgtgatctactgtaagttctgg
gagttggacacagaccacgacctttacattgaccctaaggacctggctcgttacaacgac
cacgcatcttcaagcagaatcattgagaggttgttctcaggagccgttacacggggtagc
tcagtgcagagggaagggaggatgagttatgcagagttcagctggttcctcatctcagag
gaagacaagaaaaaccctaccagtatagagtactggttcaggtgtatggacacagatggg
gacggtgtgttgtctatgtttgagttggagtacttctatgaggagcagtgtagtaggatg
gaggggatgggcattgaaccgctacccttcacagacctgctctgtcagatgctagacctt
gtcaaacctgaaagccaaggtaagataaccctgtctgatctgaagaggtgtaggatggct
catatattcttcgacacgttcttcaacctggagaaatacctggaccacgagcagagagac
ccgttcgctttgcagaaggacatagacaatgagtgtccagagccttcagactgggataaa
tacgcttcagaggaatatgagatcctggtggcagaagagacagctaatgaacagctgcag
gaggggacgtttgatgatgactatgaggaggcggagcttcctgttcaaggagagatggtt
gggaataagatggataagcttctcatatcagatctgtcagcatga
DBGET
integrated database retrieval system
