Oncorhynchus gorbuscha (pink salmon): 124007729
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Entry
124007729 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03015
mRNA surveillance pathway
ogo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124007729
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
124007729
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124007729
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124007729
03036 Chromosome and associated proteins [BR:
ogo03036
]
124007729
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
124007729
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
124007729
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
124007729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_1
EF-hand_8
DUF4187
Motif
Other DBs
NCBI-GeneID:
124007729
NCBI-ProteinID:
XP_046174414
LinkDB
All DBs
Position
LG21:complement(53558112..53609339)
Genome browser
AA seq
1074 aa
AA seq
DB search
MLQQAAVPFSPIFGNDQPPRYEDVVQNPPLPKSRDILPPSSLAPDSSLSLSTTPETAGRH
KVQTNGLQHTHTLSHTHTPSPHTHTLSVSTPPSQAHTPSLQTHTPSERTHTPSISPMEAL
FIEEDADLGRGLDRASRHTHSHTPTRSLTHTHSRNGTAFSPHTPPSSAHTHLSPNLSHVH
VTHTLQSAGEDLTCPSTSEHTPPVTHRDHDIDRLLMDLECLSQSMGRERDQVREGERERE
AEPPLPVKTRQRGTGQGNTSPQTQHCLKTQTQINPQAQRPFPVSHLTANAQATRSTPSSP
APPPQAEGSMAGLGDEEDGVLLLRILESIESFAQELVDSGGSPGNTGKTGAQSKEKEVMR
LLQDTLATAAKTDTLTQAKLPGSPPAGQDGPVHVSASTPTPAPRLTDGPVSTAPTPVPAP
IPTTLAESVSTAPTPVPAPIPTTLAESVSTAPTPVPAPIPTTLAESVSTALTPVPAPIPT
TLAESVATDQATPSAPIPTPVPPTTVVPSESADGHQHPPVADLTAVLTTTATPPPSPVPP
PTPTPGEAPVATIAAPPVAVRHPVAPSDVVALRDIGSTLLIQQTPEVIRVQSNKQDKKSG
TPPPAPLSPTPSVPPPTSPSPPPTPVVLTPPPPPPPALNIPRFYYPRGLPGVTKVNHDAA
ITAIETAFTEFEEEKADIYEMGKIAKACGCPLYWKAAMFNGAGGERTGFVSVHSFIATWR
KLLHSCYDDSSKFIYLLAKPGCSYLDQEDFIPLLQDIVDTHPGLTFLKDAPEFHSRYITT
VIQRIFYVVNRSWTGRITMTELRRSNFLQTLALLEEEDDINQITDYFSYEHFYVIYCKFW
ELDTDHDLYIDPKDLARYNDHASSSRIIERLFSGAVTRGSSVQREGRMSYAEFSWFLISE
EDKKNPTSIEYWFRCMDTDGDGVLSMFELEYFYEEQCSRMEGMGIEPLPFTDLLCQMLDL
VKPESQGKITLSDLKRCRMAHIFFDTFFNLEKYLDHEQRDPFALQKDIDNECPEPSDWDK
YASEEYEILVAEETANEQLQEGTFDDDYEEAELPVQGEMVGNKMDKLLISDLSA
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcaagcagctgtccccttctcacccatatttgggaatgatcaaccgccacgg
tatgaggacgttgttcagaaccctcccttacccaagagcagggatatactgccaccctcg
tcactcgctccagactcttctctctctttgtccactacgcctgagacagcagggagacat
aaggttcagaccaacgggctgcagcacacacacactctgtcacacacacacactccctca
ccgcacacacacacgttgtccgtttctacccctccatcccaggcacacacaccttccttg
caaacgcacactccgtcagagcgcacacacactccgtccatctcccccatggaggctctc
ttcattgaagaggacgcagacctggggagggggctggacagggcttccagacacacacac
tcacacaccccgaccagaagcctcacacacactcacagtcggaacgggacagcttttagt
ccacacacaccccccagctccgcgcacacacacctcagccccaatctgtcacacgtacac
gttacacacacactccagtctgctggtgaagacctcacctgcccctcaacttccgaacac
acccctcctgtcactcatagagaccacgacatcgacaggcttctgatggacttggagtgt
ctgtcgcagagcatgggtcgggagagagaccaagtcagagagggagagagagaaagagag
gcggagccccctctccccgttaagaccagacagagggggacaggacaggggaacacctcc
ccacaaacccaacactgtctcaagacacaaacccaaatcaacccccaggctcaaaggcct
tttcctgttagccacctaaccgctaacgcccaggccacgaggtcgacccccagctcgcct
gctcctcctccacaggcagagggcagcatggcggggctgggagatgaggaggatggggtc
ctgctgctgaggatcctggagagcattgagagctttgcccaggagctggtggactctggg
ggtagtcctgggaacactgggaagactggggctcagagcaaagagaaggaggtgatgaga
ctcctacaggacactctggctactgcagccaagactgacactctgacgcaggccaaacta
cctggatctccacccgctgggcaagatggacctgtacatgtgtctgcctccacaccaaca
cctgcacccagacttacagatggacctgtctctacagctcccacacctgtccctgcccct
atccccacaaccctagcagagtctgtctctacagctcccacacctgtccctgcccctatc
cccacaaccctagcagagtctgtctctacagctcccacacctgtccctgcccctatcccc
acaaccctagcagagtctgtctctacagctctcacacctgtccctgcccctatccccaca
accctagcagagtctgtcgccacagaccaagctacaccttctgcccctatccccacacct
gttccaccaactacagtcgtaccttcagaatcagccgatggacatcaacatccacctgta
gctgacctgacagctgtacttaccaccacggccacccctccaccctcccctgtcccgccc
cctacacccacacctggagaggcacctgttgcaaccatcgctgctcctcctgttgccgtg
agacacccggttgcccctagcgatgtggttgccctgagagacatcggctcgacgttgctc
atccagcagacgcctgaggtgatcagagtccagtccaacaagcaagataaaaaatctggc
acccctcctccagcccctctctcccccaccccctccgttcctccccccacctccccctct
cctccccccactccagtcgtcctcacccctcctcctcctcctccccctgccctcaacatt
ccccgcttctactaccctcgagggttaccgggggtaacaaaagtcaaccacgatgcggcc
atcactgccatagaaacagccttcaccgagtttgaggaggagaaggctgatatttacgag
atgggcaagatcgctaaggcatgtggctgtcctctgtactggaaggcagccatgtttaac
ggagcgggaggagagaggaccggcttcgtctctgttcactccttcatcgctacctggaga
aagttgttacatagttgctatgacgattcgtctaagtttatctacctcctagcgaagcct
ggctgttcctacctggaccaggaggacttcatacctttattacaggacatagtggacact
cacccaggactgacgttcttgaaggatgccccagaattccattcccgttacatcaccacc
gtgattcagcggatattctatgtggtcaaccgctcgtggacaggtcgcatcaccatgacg
gaactacgcaggagcaacttcctgcagaccctggccctgttggaagaggaggatgatatc
aaccagataacagattatttctcttatgagcatttctatgtgatctactgtaagttctgg
gagttggacacagaccacgacctttacattgaccctaaggacctggctcgttacaacgac
cacgcatcttcaagcagaatcattgagaggttgttctcaggagccgttacacggggtagc
tcagtgcagagggaagggaggatgagttatgcagagttcagctggttcctcatctcagag
gaagacaagaaaaaccctaccagtatagagtactggttcaggtgtatggacacagatggg
gacggtgtgttgtctatgtttgagttggagtacttctatgaggagcagtgtagtaggatg
gaggggatgggcattgaaccgctacccttcacagacctgctctgtcagatgctagacctt
gtcaaacctgaaagccaaggtaagataaccctgtctgatctgaagaggtgtaggatggct
catatattcttcgacacgttcttcaacctggagaaatacctggaccacgagcagagagac
ccgttcgctttgcagaaggacatagacaatgagtgtccagagccttcagactgggataaa
tacgcttcagaggaatatgagatcctggtggcagaagagacagctaatgaacagctgcag
gaggggacgtttgatgatgactatgaggaggcggagcttcctgttcaaggagagatggtt
gggaataagatggataagcttctcatatcagatctgtcagcatga
DBGET
integrated database retrieval system
