Oncorhynchus gorbuscha (pink salmon): 124007735
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Entry
124007735 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT and WD repeat domain-containing protein 2-like
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124007735
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
124007735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_NWD2_C
EIF3I
WD40_WDHD1_1st
Beta-prop_EML_2
AAA_16
Beta-prop_WDR90_POC16_2nd
NPHP3_N
Beta-prop_TEP1_2nd
Beta-prop_RSE1_2nd
NACHT
AAA_22
B-prop_COPA_B_2nd
AAA_28
AAA
NPHP3
TniB
AAA_25
ARL2_Bind_BART
Motif
Other DBs
NCBI-GeneID:
124007735
NCBI-ProteinID:
XP_046174422
LinkDB
All DBs
Position
LG21:34046061..34144844
Genome browser
AA seq
1733 aa
AA seq
DB search
MWRSGVGSRQPCPRESALRRAAISGNVLALPQHHVPTGRSVRVFICANPDDTEAERNALK
EHVYPKLRDFCRENYGIEFQVVDLYWGVDPEEWDSPDLQRLRMKLLEECLQTSAGPCFVG
LVGEKYGSIRVPGEVEAPEFERILDAAVEVGLDTHILEEWYCRDENAVPPAYYLKPKAQM
LKNYQNSMESSSAAKMKNDKAWRNVSEEIKRIFRRSVLQLQEKGTMKPPQANKFLCSALE
DELDFALGKQTPAFLKKCVCYIRKISNFDRHAKLPEMAKYMDIVVAEDRVMRNQEAYKRL
LNVRDEFIPTVVASSNLRVYSSVTHCDMKLGYSQEVESHYVEGLCKQFYEDMVDIIQATV
QQNFDTETDPLYDEILQHLSLCKNFSSFYDYKSETLDLVQEYLLPSKESRMNPLVVYGGP
CTGKTLLLAEVAKQAYTWLQTEMGPETDPVVIVRFVGSSEFATNLRTLLQSICEQIAINY
RCLIHFLPNKIQEMRELLVNLLGEPSFHRPLVIILDALEQLSEADEARELWWLPAHLPRT
VRIVVSTLPNKHGILQKLRCLIHDEGRYVELVQRDRKACSQILKQQLLGLKRKVTSGQQI
YVNEALAKCTLPMFVNLIYQEVVHWRSHKDVDDKSLCSTVHESIEQLFYSVENKLGQRFV
FRSLGYITMANVGLTEVELEDILSLDNSVLGDIMVSSNLKNPLRISYDLVARLKEELEGY
LLERQVHNVTLMMWANRHLQLIAQKLYLSNEEDVHQMHSLLAEYFLGAWSGGRKKIFHCD
NNHFASLNISQHKNPHSQQPSHKEASTEKYSYDRQTPEQPWVFQCNLLEPDIFFVNHRKM
TELLYHLTRSGRMDDLMYGVIMNFSWLYTMIKIGQFEKALTDIDVAYNYSQEKELKFLAT
TLRSIKIKVMKNPASLSAELQQRLLPVVTSLPKLQHLLLECDKDGPKYCSIVPLHSSMDV
TYSPERLPLCSSYMQIVEILPTLAPNIVLVALEDGSVSTWDVESRQLLRQIDTAHSVVLG
IRLTSDEKYLVVATTKNTLLIYDNHKSCLLSEVDIKNSKHCGITGGVAFINGFTLSSHHA
LAWLEASKDVNVIDLLYGWPLYLFHCWYEVTCVQCSPDGMYAFCGQYLNTTSIFHLGTGE
KLATVTSQFSGGFVKSILVLDTIHQMVMIDNEGSLSVWNTKEITNPRLMEDYDCRGDENE
VVGIELSEDQRSILICKDKSIEVLDTKLWKMAEKFKAKHAERFVAAVLSKNGQSIVASME
NTSSIFVWRRDSGQCMASLIEISGAIVKLIKSIHHNLLLSVASSGVLSVWDIDIITAMSN
IDKTGKKIQSLQLSGREDFVFTMDGSEAIHKWNFSTGFIETVFKHEGLVENCVLTSSGEL
MVTSDDKCSQYIWHTATGENIFRINGQKISQLLMTHNDQFVVSLCEQNCSRVWRLATGHK
VCNILVTLQNALITTANTFLVGITKNKLLAVSLWSGSISKKFVCDDGISIINFKLIPDCP
DFVVFITSTETVFIWSVADESVCRRVQLPTNFLKNLEEFQISPNGKLGIISKGDENINVL
DLHSGKLRLVHAAGIIWRQKLSRDGRYLVYVCFRNSNEDDEVGVVSNLIVMRLADGKSIG
TCSLYKTPTFLCLCQRALNIIIGFEDGSIGTYTVVDRVDAALKIKIATSNSRQIVNNASQ
KIRPKCGNHAFKTIADCLWRESTEVFSRDSPINVSDSGEAETTIPTKKNELLQ
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgctcgggagtggggagcaggcagccctgtccgcgggaatcggcgctccgcagg
gcagccatcagtggcaatgtcctcgcactgccgcagcaccatgtccccactggcaggagt
gtccgggttttcatctgcgccaaccccgacgacacagaagcagagaggaatgcactgaaa
gagcatgtatatcccaaactacgagacttctgcagagagaactatgggattgagttccag
gtggtagacctgtactggggggtggacccagaggagtgggacagtccggacctgcagcgt
ctgaggatgaagctactagaggagtgcctccagacctctgcaggtccatgttttgttggg
ctggtgggggagaagtatggcagtatccgcgttccaggggaagtggaagctccagagttt
gagaggatcctggacgcggcggtggaggtggggctagacacacacatcctggaggagtgg
tactgccgagacgagaatgccgtgccaccagcctactacctcaaacccaaagcccagatg
ttgaagaactaccagaactcaatggagtcgagtagtgcagccaagatgaagaacgacaag
gcgtggaggaacgtgtctgaggagatcaagaggatcttccgtaggtctgtcctgcagctc
caggagaagggcaccatgaagccccctcaagccaataaattcctctgctctgccttggag
gatgaactggacttcgccttgggtaaacaaacgccagccttcctcaagaagtgtgtctgc
tacatccgcaagatctccaacttcgaccgacatgccaagctcccggagatggccaagtac
atggacatcgtcgtcgctgaggaccgcgtcatgcgtaaccaggaagcctacaaacgtctc
ttaaatgtgcgggatgagtttatcccaacagtagtggcctcgtcaaacctccgtgtctac
tcctctgtgacgcactgcgatatgaagctaggctactcccaagaggtggagagccactac
gttgaaggcttgtgtaaacagttctacgaggatatggtggacatcatccaggccacggtc
cagcagaactttgacacagagacggaccccctgtacgatgagatcctccagcacctgtcc
ctgtgtaagaacttctcttcgttctacgattataagagcgagacactggacctggtgcag
gagtatctgctaccgtctaaggagagtaggatgaatcctctggttgtttacggtgggcca
tgcacggggaagacactgctgctagcagaggtggccaaacaggcctacacgtggctccag
acagagatgggtcctgagacagacccggttgtcattgttcgctttgtgggctcctccgag
ttcgccacaaacctgcgcaccctcctccagagcatctgcgagcagatagccatcaactac
cgttgcctgatccacttcttgcccaacaagatccaggagatgagggagctgctagtcaac
ctgctgggggagccctctttccatcggcccctggtcatcatcttggatgccctggagcag
ctctcggaagccgacgaggcccgtgagctgtggtggctccccgcccacctgcctcgcact
gtccgcatcgtggtctccactttacccaacaaacacggaatcctccagaagctccgctgt
ttgattcatgatgaagggcgctacgtagagctggtgcagcgggaccgtaaggcctgtagt
cagatactgaagcagcagctgctggggttgaagagaaaggtgacttcgggacagcagatc
tacgtcaatgaagcgctggccaagtgtacgcttcccatgtttgtcaacctcatttaccag
gaggtggtgcattggcgctcgcacaaggatgtggatgacaagtcactgtgctccaccgtg
cacgagagcatcgagcagctcttctactctgtggagaacaagctggggcagcggtttgta
ttcaggtcactgggatacatcaccatggccaatgtggggttaacggaggtagagctggaa
gatattctgtcattggataacagtgtgttgggagatatcatggtgagttcaaatctaaaa
aacccactgaggatctcttatgacctggttgcgagactgaaagaggaactggagggttac
ctgctggaaaggcaggtgcataatgttaccctgatgatgtgggccaacagacacctgcaa
ctcatcgcccagaagttgtatcttagcaacgaggaggatgtacaccagatgcacagcctc
ctagccgaatacttcctgggggcatggtcgggaggcaggaaaaagatcttccactgtgac
aacaaccactttgcctcgcttaacatctcccaacacaagaatccacactcccagcagccg
tcccacaaagaagcatccaccgagaagtactcctatgacaggcagacccccgagcagccc
tgggtgttccagtgcaaccttctggagcctgatatcttctttgtcaaccacaggaagatg
acggagctcctctaccatctaactcggagcggccgcatggacgacctcatgtacggggtt
atcatgaactttagctggctctacaccatgatcaagatagggcagtttgagaaggcactg
accgacatagatgtagcttacaactactcccaggagaaagaactcaagtttttggccacc
acgctgcgcagcatcaagatcaaagtgatgaagaacccggcatccctgtccgcagagctg
cagcagaggctcctccctgtggtcacctctttacccaagctccaacacctcctcctggaa
tgcgacaaggacggccccaaatactgctccattgtgcccctccactcctccatggatgtc
acctacagccctgaaaggctgccgctgtgctccagctacatgcagatcgtggagatcctg
cccaccctagcccccaacatcgtacttgtggccctggaggatgggtctgtgagcacatgg
gatgtggagagcaggcagctcctccggcagatagacacggcccattcggttgtcctggga
atcaggctaaccagcgacgagaagtacctggttgtggcaaccaccaagaacacgctactc
atatatgacaaccataagtcttgcttgctgtccgaagtggacattaagaactccaagcac
tgtggtatcacaggaggggtggccttcattaatgggttcaccctgtccagccatcatgcc
ttggcctggctagaggccagtaaagatgtcaatgtcatcgatctgctttacggctggccc
ctctacctgttccactgctggtatgaggtcacctgcgtccaatgctccccggatggaatg
tacgccttctgtggtcagtacctcaacaccacgtccatcttccacctggggactggggaa
aagctagctacggtcacgtcgcagttctccgggggatttgtcaagtccatcttggtcctg
gacaccattcaccagatggtgatgatcgataatgaggggagcctgtcggtgtggaacacc
aaagagatcaccaaccccagactgatggaagattatgactgccggggggatgagaacgag
gtcgtaggcattgagctgtcagaagaccagcgctccatcctcatctgcaaagacaagagc
attgaggtcctggacaccaagttgtggaagatggcagagaagttcaaggccaagcacgct
gagcgattcgtggctgcagtcctctcaaaaaatggccaaagtattgtggcctccatggag
aacacgtcatccatatttgtgtggaggagagacagtgggcagtgcatggccagcctgatt
gagatctctggggccattgtcaaactcatcaagtccatccaccacaacctgctcctgtct
gtggccagcagtggagtgctatcagtctgggacattgacatcattacagccatgtccaac
attgacaaaacaggcaagaagattcagagcttacagctttctggcagggaggactttgtg
ttcaccatggacggctctgaagccatccacaagtggaacttcagcacaggcttcatagag
actgtcttcaagcatgagggcttggtggaaaactgtgtcctgacatcctctggggaactc
atggtgacgtcggatgacaagtgcagccagtacatctggcacacggccactggcgaaaac
atctttcgcatcaacggacagaagatatctcagctcctgatgacccacaatgaccagttt
gtggtttccctctgcgaacagaactgctcccgagtctggaggctggccactggacacaag
gtgtgcaacatcctggtgaccctacagaatgcactgatcaccaccgcaaacaccttccta
gtggggatcacaaaaaacaagctgctcgctgttagcctctggtcaggcagtatttccaag
aagtttgtctgtgacgatggcattagcattatcaacttcaaactcattcctgactgccca
gactttgttgtcttcatcacatctacagagactgtgtttatatggagtgtggcagatgag
tctgtctgcagacgggtccagctgcctactaacttcctaaaaaatctggaggagttccaa
atttcaccaaatgggaaactgggaatcatctccaaaggtgacgagaacattaacgtgttg
gatcttcatagcggcaagctgagacttgtccacgccgccggtatcatctggcggcagaag
ctgtcgagggacgggcgctacctggtctatgtctgcttccggaacagtaatgaggatgac
gaggtgggcgtggtgtccaacctgatcgtgatgcgtctggcagatggaaagagcatcggg
acatgctccctctacaagacgcccaccttcctctgcctgtgccagcgagcgctcaacatc
atcattggcttcgaggatggcagtattggcacctatacggtggtggacagggtggatgcc
gcgctcaagatcaagattgccacatccaacagtcggcagatcgtcaacaatgcctcacaa
aagataaggcccaagtgtggcaaccacgccttcaagaccattgcagactgcttgtggagg
gagtccaccgaggtcttctccagggatagccccatcaatgtgtctgactctggagaggct
gagaccaccatccccaccaaaaagaacgaactattgcagtga
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integrated database retrieval system
