Oncorhynchus gorbuscha (pink salmon): 124007943
Help
Entry
124007943 CDS
T07892
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1-like isoform X1
KO
K15516
fragile X mental retardation protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124007943
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124007943
Factors involved in mRNA localization
Other mRNA localization factors
124007943
mRNA cycle factors
Stress granule specific factors
124007943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
DUF150_C
Tudor_2
Motif
Other DBs
NCBI-GeneID:
124007943
NCBI-ProteinID:
XP_046174789
LinkDB
All DBs
Position
LG21:complement(20461500..20491896)
Genome browser
AA seq
682 aa
AA seq
DB search
MDGLAVEVRGSNGAFYKGFIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPADYHKDIG
EGEEVEVYSRANEQEPCGWWLARVRMMKGEVSQGLFYVIEYAACDATYNEIVTHERIRPV
NPNSPSSRNSFHKVPIAVPEDLRDICANDNIHKDFRKAIGANCIFYSAASHELTVLSTNE
TSVKRAALLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAYQEEVKVREDLMGLAIG
SHGANIQQARKVPGVTAIELEEESCTFRIYGETPEAVKLARVFLEFKEDYFQVPRNLVGK
VIGKNGKVIQEIVDKSGVVRVRIEGDNDKKLPREEVGRQGAGREDTAPKQEGMVPFVFVG
TKENISNAQALLEYHVAYLQEVEQLRLERLQIDEQLRQIGVGYRAPPSRVGGTGPGDREK
GYLTDESSNSTNLHTSRIYGGRGRGRRPSNSQYSGYGTNSEQSNASEPEDLNERDQRPRG
VGGDERGSRRGGRGRGSNTGRGRGGPASRPSNSISSVLKDPDSNPFSLLEGESEQGDTDA
SEGVGEVDLRRRSRRRRNDQEPSVMDAAATESDSQAGPNENGLDEQGRPQRRNRSRRRRN
RGNHPEGGSASCDRLPVEVTVADYISRAESQSRQTLPQETLAAPELKENGSSAKRDEHMA
PSKRSPSNGMATPSETLVNGVS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggacgggctggcggtggaggttcgcggttcgaacggggccttctacaaggggttcatc
aaagatgtccatgaagactcactcacaatagtatttgaaaacaactggcaaccagagaga
cagctgcccttcagtgacgtgcggctgccgcctccagccgactaccacaaggacatcggc
gagggagaggaggttgaggtgtactccagggccaacgagcaggagccatgtggctggtgg
ctggcccgggtgagaatgatgaagggagaggtgagtcagggactgttctacgtcatcgag
tacgcagcctgcgacgccacatacaacgagatcgtcacgcacgaacgcatccggcccgtc
aaccccaacagcccctcctcccgaaactccttccacaaggtccccatcgctgtcccagaa
gacctccgggacatctgtgcaaacgacaacatccacaaagacttcaggaaagccatcgga
gccaactgtatattctacagtgcagcctcacacgagctcaccgtgctgtcaacgaacgag
acgtcagtaaagcgtgctgctctcctgagcgacatgcacttccgcagcatccgtaccaag
ctcatgctcatgtcccgcaacgaagaagccactaaacaccttgagaccagtaagcagctg
gcgtcagcataccaggaggaggtgaaggtaagggaagacctgatgggtctggccattggc
tcccacggtgccaacatccagcaggccaggaaggtgcccggcgtcaccgccatcgaactg
gaggaggagagctgcaccttcaggatctacggagagactccagaagcagtgaaactggcc
agggttttcctggagttcaaagaagactacttccaggtgcccaggaacctcgtaggcaaa
gtgatcggcaagaacggaaaagtcattcaggagatcgtagacaagtctggtgtggttcgg
gtccggatcgagggggataacgacaaaaagcttccccgggaggaggtaggcaggcagggg
gctggcagagaagacactgcccctaaacaagagggcatggtccccttcgtctttgtggga
accaaggagaacatcagcaatgcccaggccctgctggagtaccatgtggcctacctacag
gaagtggagcagctgcgtctggagcggctgcagattgacgagcagctccgtcagatcggg
gtgggttatcgtgctccccctagtcgggtcgggggcactggccccggggacagggagaag
ggctacctgacggacgagagcagcaactccaccaacctccacacctcccgcatctacgga
ggccgcggccgagggcgcaggccctccaacagccagtactctggatatggtaccaactct
gagcagtccaatgcctctgagcctgaggacctcaatgagcgtgaccagcgtccacgtggc
gtgggtggagatgagcgaggctcccgccggggtggcaggggccgtggatccaacaccgga
cggggccgcggaggacccgcctcacgaccttccaactcaatcagctccgtgctgaaggac
ccggacagcaacccgttctccctgctggagggtgagagtgagcagggtgacacagatgcc
agtgagggggtgggagaggtagacctcaggagacgctctcgccgtcgccgcaatgaccag
gagcccagtgtgatggacgccgctgccacagagtcagacagccaggccggacccaacgag
aatggactggatgagcagggcagaccccagcgccgcaacaggagccgccgtcgccgtaac
cgtggcaatcacccagagggaggatccgccagctgtgacagactgccagttgaagtgacc
gtggcagactacatctcccgcgccgagtcccagagccgacagacccttccccaggaaaca
cttgctgctccagagctcaaggaaaacgggagcagtgccaagagggacgagcacatggcc
ccctccaagcgttcccctagcaacggcatggccacacccagcgagacccttgtcaacggc
gtctcgtag
DBGET
integrated database retrieval system
