KEGG   Oncorhynchus gorbuscha (pink salmon): 124007953
Entry
124007953         CDS       T07892                                 
Name
(RefSeq) collagen alpha-1(XXV) chain isoform X1
  KO
K24356  collagen type XXV alpha
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:ogo00536]
    124007953
Glycosaminoglycan binding proteins [BR:ogo00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   124007953
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 124007953
NCBI-ProteinID: XP_046174810
LinkDB
Position
LG21:complement(34873820..35217612)
AA seq 361 aa
MEREATSLKQQYCCTTVMNVISSLFSVASLAFCILLSVQTSAIADRVLDLETGHGEQIFH
RVPSFSVDQFNSLIQERVDELLSQRSYENLSKVRIARQVSHTPDCNCPPGPPGKRGRRGR
NGEPGPPGPPGLQGDKGDQGDQGPRMVFPKINHGFLSADQQLIKRRLIKGDQGSAGPPGP
PGPPGPPGPRGPPGDTGKDGPRGVPGLPGDTGTPGELGLMGPEGPPGQKGSLGPPGIPGD
DGLKGEMGERGEKGDMGEDGQKGEVGEKGDAGSSAAGIKGEPGESGRGGSKGEPGLPGLP
GLPGIKGEPGFLGPQGEPGLPGLPGTKGERGELGPPGKGERGRAWTGRSKGGARRGREPR
P
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggagagagaagcgacatctttgaagcagcaatattgctgcacaactgttatgaacgtt
atctcgtcgttattctctgtagcgtcccttgccttttgcatattattaagtgtacaaaca
tcagcgatcgcggacagggtcctggatttggaaactggacatggcgagcaaatctttcac
agggtccccagtttttctgtggatcagtttaattcattgattcaagagagagtggatgag
ctcctgtcacagcgctcctatgaaaatttatcgaaggtacggattgcccgacaagttagc
catactcctgattgcaactgtcccccaggcccgccaggaaagcggggaagaagaggccgg
aatggcgaacctggacctcctggtcctcctggtcttcagggtgacaagggggatcaaggc
gaccaaggaccgcggatggtcttccctaagatcaatcatggctttctttctgctgaccag
cagctcataaagcggcggcttattaagggagatcagggttcggcaggtccaccagggcct
cctggacccccaggtccccctggcccccgagggccaccaggggacacaggcaaggatggg
ccccggggagtgccaggtctgccgggagatactgggaccccaggagagctgggactaatg
ggacctgaggggccaccaggacaaaagggttccctcgggcctccaggcatcccaggtgat
gatgggctgaagggtgaaatgggagagcgaggtgaaaagggtgacatgggagaagatggg
caaaaaggtgaagttggggagaagggtgatgcaggctcctctgctgcaggcattaagggt
gaaccaggagagtcaggacgtgggggatcaaagggagagccaggacttccagggctgcct
ggacttcccgggattaagggtgagcctggattcttaggacctcagggagaaccagggctc
ccaggactaccgggaaccaagggcgagcgaggggaacttggcccaccaggcaagggagag
cgggggcgagcctggacaggccggtcaaaagggggggccaggagaggcagggaacccagg
ccctag

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