Oncorhynchus gorbuscha (pink salmon): 124008121
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Entry
124008121 CDS
T07892
Name
(RefSeq) protein SON-like isoform X1
KO
K23718
protein SON
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124008121
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
124008121
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G-patch
DND1_DSRM
dsrm
G-patch_2
Motif
Other DBs
NCBI-GeneID:
124008121
NCBI-ProteinID:
XP_046175074
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Position
LG21:complement(56693090..56704778)
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AA seq
1171 aa
AA seq
DB search
MAANIEQIFRDFVVNKIKEIEDESQDIILTDDGHPNGKTAEGADGINNTQDKDGVANKEE
GAVPQKKHKKHKKHKKHKSKKKKRKEEKESGSESAADSDGDKAKTGEEDDGRSKRHKRHS
GKKKKKKQKKDGDKSNSSSGSESESKPQPGNKESKPQDLPDIIPKLEEKCPEKSSRCSRS
RSGKRRSRSRDRRGRSRSRSGRRRGGHTRSRSRHRRSGSHSRRSGSARRGRRTRSRSLVI
LKKDRRSRSRSRRRSKSKTRSQSSHREMSSGSPSPSRNNKSKSRSASRDSQSGEKDPSAA
LAEDESAVKDENVMVPIDPPALASESSIEGVVNVAAASGGGWKPIPFLGDSSKEEPAVSS
QPSGCLTSPQKCPIPPEVPSGEQHEASTDHQSTSASDLNLNSQPTGEPGESDGPVTSETL
DGSVDSLPPKTDAGGGDKVTPQGEELPASPQPKPQPTSGEAEMTEKEGESSKSRSPSKRK
KSRSKSPGQKKRSDAKSSKKRRSRSKSPGRKRKSRSSSPSRKRKSRTPSRRKKSRSKSGT
RKKKSRSKSRTRNKRSKSRSPKRKRSKSRSPARRSKRSRSRSGSRRRGRGAFGSHQLSQR
DRWKREPSHSPVLILRKKRSPARNNRDTSKSPPRLTELDKDQLLEIAKANAAAMCAKAGI
PIPESLRPKAVLQLPLPSPNNPMSFSMPMNMNMPMNMSMNMPMSMTMNAAMASMTAATMT
AALASMGSMASMHQMAPLPSITNKPPPGPPQPNMATIEDVKRKVAKQANSISIKEFTDKC
KKIVEKGGELALAEPRISDDEDDGKPFGRAALREVKGISFSLNNASVRPSPALVVRSEAA
FAKEFPVSSGSQHRKKEGDGGGAYGEWVTVDKKAEKAKVAATKALATAAKETSPGDAPLS
AVSVAMEETAVVKESDSVFPEPPLQPVDITQAVGERMKAQKRLAENPYDVSAICMLSRAQ
EQVDAWAQSNTIPGLFTGSTGATVLSSEELSNSGPQAWIKKDQFLRAAPVSGGVGEFLMR
KMGWRTGEGLGRHREGTVEPIIIDFKTDRKGLVAEGEKTQKSGGMVVMKDLLGKHPVSAL
MEMCNKKKWIPPEFVMVTHSGPDHRKNFLFKVVVNGQDFQPASASPNKKHAKAMAATVAL
QAMGEVAGDTGLYTGPVFTTATTGPLFSSNV
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacatcgagcaaatttttcgcgatttcgtagtaaataagataaaagaaatt
gaagatgagagtcaagatatcattctgacagatgacggccatcccaatggtaaaactgca
gaaggagcagatgggatcaacaacacacaagataaagatggcgtagccaataaggaagag
ggtgctgtcccacaaaagaaacacaagaagcacaagaaacacaagaagcacaaaagcaaa
aagaagaaacgtaaggaagagaaagagagcggctcagaatcagcagcagactctgatgga
gacaaggcaaagactggggaagaggatgacgggagatccaagcggcataaacgacattct
gggaagaagaagaaaaaaaagcagaagaaagatggtgacaagtccaacagctcatctggg
tcggagtccgagtcgaagcctcagcctgggaacaaggagagcaaacctcaggatctgcct
gatatcatccctaaactagaggagaagtgtccggaaaagtcctccagatgctcacggtct
cgttcaggcaagcgcaggtccagatccagggacaggagagggagatccagatcgaggtcc
ggtagaagacgtggcggacacacacgttccagatcacggcaccggaggtccgggtcacat
tctcgaaggtctgggtctgccaggagaggcaggagaacccggtcaaggtccctcgtgatc
ttgaagaaagacagacggtctagatcgagatccagaaggcgatcgaaatctaagacgaga
tcccagtcgagtcaccgagagatgagttcaggatctccctctccttccagaaacaacaaa
tccaaatccaggtctgcctcaagagacagccaatcaggagagaaggatccctctgctgcc
ctggctgaagatgagtctgctgtgaaagacgaaaacgtaatggttcctatcgatccgcca
gccctagcttccgaaagcagcattgagggtgttgtcaatgtggccgccgcctctggagga
gggtggaagccaatacccttcttaggcgacagcagtaaggaagagccagccgtttcctcc
cagccctcaggatgtctgacatctccacagaagtgccctattcctcccgaggtgccttca
ggtgagcagcatgaggcctccactgaccaccagtcaacgtcagcatctgatctgaacctc
aacagccagccaactggtgagccaggggaatcggatggacctgttacttcagaaaccttg
gatggctctgtagattccttaccccccaaaacagatgctggtggaggagacaaggtgaca
cctcagggtgaagagctgcctgcctcacctcaacctaaaccacagccaacatctggagag
gcagagatgacagagaaggaaggagaatcttcaaagtccaggtctccttcaaagaggaaa
aagtcaaggtcaaagtctcctggtcagaagaaacgctctgatgcaaagtcctccaagaag
aggaggtccagatccaagtctccagggaggaaaaggaaatcgaggtcctcgtcgccaagc
cgcaagaggaaatccaggacgccgtctcggaggaagaagtctcgctcaaagtccgggacg
agaaagaaaaaatcacggtccaagtccaggacgcggaacaagcgctcgaagtctaggtca
ccgaaaaggaaacgatccaagtcacggtctcctgctcggaggtcaaagaggtcaaggtca
cgctccggttcgcggcggaggggtaggggagcattcggtagccaccagctgagccagagg
gaccgctggaagcgtgagccaagccactccccagtccttatcctccgcaagaagaggtct
ccggcacgcaacaaccgcgacaccagcaaaagcccgccacgacttacagagctggataaa
gaccagttactggagattgctaaggctaatgcagccgccatgtgtgccaaggcagggata
cccatcccagagagcctgcgacccaaagctgtcctccagctgcctttacccagccccaac
aaccccatgtccttctccatgcccatgaatatgaacatgcccatgaacatgtctatgaac
atgcctatgagcatgaccatgaatgcagctatggctagcatgacagctgccacaatgact
gctgccctggccagtatgggatctatggcctccatgcaccagatggccccgctccccagc
atcaccaacaagcccccgccaggtcccccccagcccaacatggccaccatcgaggatgtg
aagaggaaggtggccaagcaggcaaacagcatcagcatcaaggagttcactgacaagtgt
aagaagattgtggagaagggaggggagctggccctcgctgaaccccgtatatctgatgac
gaggacgacggcaaaccgtttggacgagctgccctgagggaggtcaagggcatctccttc
agcctcaataacgcatccgtgcgtccatctccggcgttggtggttcggagcgaggcggcg
ttcgccaaggagttccccgtgtcgtcgggctcccagcacaggaagaaggagggcgacggg
ggaggggcttacggagagtgggtgaccgtcgacaagaaggcagaaaaggccaaggtggcg
gcgaccaaggcattggcaacggctgccaaggaaacttcgcctggggatgcgcctttgtct
gcggtgtccgtggcaatggaggagacggcggtcgtcaaggagagtgatagtgtgttcccg
gagccgccgctacagcctgtagacatcacccaggcagtcggtgagaggatgaaggcccag
aagcgtctggctgagaacccatacgacgtcagtgccatctgcatgctcagccgtgctcag
gaacaggtggatgcatgggcccagtccaacaccatccctggtctgtttacaggttctact
ggagcaacggtgctcagctcagaggagctgtccaacagcggaccacaggcctggattaaa
aaggaccagttcttgcgagcagccccggtgtcgggaggagtaggggagtttctcatgagg
aagatgggatggcggacgggggaggggctagggcgacaccgcgagggcactgtcgagcca
atcataatcgacttcaagaccgaccgcaaaggtctggtggctgagggagagaagactcag
aagtcgggcggtatggttgtgatgaaggatctactgggtaagcacccagtgtctgctctg
atggagatgtgcaacaagaagaagtggattcctccagagtttgttatggtgacccacagt
ggcccagaccaccgcaagaacttccttttcaaggtggtggtaaatggtcaagacttccag
cctgcgtcagccagtcccaataagaagcatgccaaagccatggctgctacggtggctctg
caggccatgggagaggtggcaggggacacagggctttatacagggcctgtgttcaccact
gctaccactggcccactgttctcctccaacgtctaa
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