Oncorhynchus gorbuscha (pink salmon): 124008122
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Entry
124008122 CDS
T07892
Name
(RefSeq) paraspeckle component 1-like isoform X1
KO
K24993
paraspeckle component 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124008122
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124008122
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
124008122
NCBI-ProteinID:
XP_046175076
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Position
LG21:complement(56811809..56842064)
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AA seq
545 aa
AA seq
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MAHRNLKQVNIQNNAPSPKPQQQQQYHHQQQHTKRNMDSPGLERRPNVADGKTPPPKPPT
AASPAAEGEGGAGESQEMTLDIKSFRRPGEKTFTQRCRLFIGNLPTDLTEDDFKKLFSKY
GEANEVFINRDRGFGFIRLETRTLAEIAKAELDGIVLGNRPIRIRFATHGSALTVRNLSP
VVSNELLEEAFSEFGPVERAIVVVDDRGRPTGKGFVEFANKPCARKALDRCADGALLLTT
SPRPAIVEPTEQLDEEDGLPEKLLVKSVHYHKEREHPPRFAQPGTFEFEYSSRWKALDEM
EKQQRDQVERNIREAKEKLEQEMEAAKHEHQLMMMRQDLMRRQEELRRLEELRNQELQKR
KNIEMRHEERRRQEEEMMQRHREQEEMRRQPDGFKPNYADTREQEMRMGELGPRGAINMG
DGFNPASVAGASVNQGPPQMIGIGMSGRAGAMLPEGTPNMGAPNMMPDNGAMQRNDRFPQ
GAPNQIGSSPMSGRPGVESPQQQQAVGAGLMGAGPGPAVGGPAGFGRGIPVVGNYEGPNN
KRRRY
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctcaccgaaatctaaaacaggtcaacattcaaaacaacgcaccgtcgccgaaacct
cagcagcagcagcagtaccaccaccagcagcagcacacaaagcgcaacatggattctcca
ggcttggagcgaaggccgaatgttgcggatgggaaaaccccaccaccaaagccgccgacg
gctgccagccctgctgcagagggggagggtggagccggagagtcgcaggagatgacgctg
gatataaagagtttcaggagacccggggagaaaaccttcacgcagcgttgtaggttgttc
atcggtaacctcccgacagacctcacggaggatgatttcaaaaagctgttttccaagtat
ggcgaggctaacgaggtgtttatcaaccgagaccgaggattcggcttcattcgactggaa
accaggacgctggcagagattgcaaaggcagagttggacggcatagtgctggggaaccga
cctatccggatccgcttcgccacgcacggctctgccctcacggtgcggaacctttccccc
gtggtctccaacgagctccttgaggaggccttctccgagttcgggcccgtggaaagggct
atcgttgtggtggatgaccgaggaaggcccactgggaagggcttcgtggagtttgctaac
aaaccttgtgctcgtaaagccctggatcgctgtgctgacggggcgctgctgctcaccacg
tctcctcggcctgccatagtggaacccaccgagcagctggatgaagaggatggactccca
gagaagttgctggtgaaatctgtacactaccacaaggagagggaacaccccccacggttt
gcccagccggggacatttgagtttgagtactcgtcccgctggaaagccctggacgagatg
gaaaagcagcagagagaccaggttgagcgcaacatccgagaggcaaaggagaagctggag
caagagatggaggccgccaagcacgagcatcagctcatgatgatgagacaagacctgatg
aggcgtcaagaggagctgagacgcctggaggagcttcgcaaccaggagctgcagaaacgc
aagaatatagagatgagacatgaggagaggcgtaggcaggaagaggagatgatgcagcgc
catcgagagcaggaagagatgagacgccaaccggacggcttcaagccaaactatgcggac
accagagaacaggaaatgagaatgggtgaactgggccctcgtggagccattaatatggga
gatgggtttaaccccgcctctgttgccggggccagtgtaaaccagggaccccctcaaatg
attggaataggcatgagcggaagggccggagccatgctccccgagggaactccaaacatg
ggcgcaccaaacatgatgccagacaatggagccatgcagcgcaacgataggttcccccag
ggggctcctaatcagattggttcgtccccaatgagtggccgtccaggtgtcgagtcccct
cagcagcaacaggcagtgggggcagggcttatgggggcagggcctggacctgcagtgggg
gggccagcaggcttcgggaggggaatccctgttgtgggaaactatgaagggcctaacaac
aaacgtcgcagatactga
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