Oncorhynchus gorbuscha (pink salmon): 124008216
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Entry
124008216 CDS
T07892
Name
(RefSeq) aryl hydrocarbon receptor-like isoform X1
KO
K09093
aryl hydrocarbon receptor
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124008216
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124008216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_11
HLH
bHLH_HIF1A
PAS_9
PAS_4
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
124008216
NCBI-ProteinID:
XP_046175286
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All DBs
Position
LG21:45449367..45534064
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AA seq
1022 aa
AA seq
DB search
MYAGRKRRKPVQRDIEVKDQKEKQKAPSEGTKSNPSKRHRDRLNSELDRLASLLPFPEEV
TSSLDKLSILRLSVSYLRTKNFFSVALKTQACKGLKANGGNHDSSETTGLVDGWMSEGEL
LLQALNGFILVITADGVIFYSSHTIQDYLGFHQTDVMHQSVFDLIHTEDQQEFRRNLHWA
LNPPAVPQQVESPPDGKPVPSSSLVTYNPDQLPPENSSFLERNFVCRFRCLLDNSSGFLA
LTLQGRLKFLHGQNCRLDDGCNVPPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFT
PMACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTK
DNRWRWVQANARLVYKNGKPDYIIATQRPLVEEEGGEHLRKRSMHLPFTFATGEALLYQS
SYPIHGLTDSLQAKGKTKSKKGKLDKNPSKDNGGMDPSSLLGALMRQDESVYVCQPAVEP
KMSFHSSLFSEGGEGKGQSSGYYSGGPLGGGGGVGESWSSVPNGVTTISTGLNGEPPSSF
DPLLATLDSLSLEGDETCSNSELFSALENLGLNAEDLELLLLDERMIRVEMDPDYIPSLN
DLLTNNEILAYIHDSLENKTEEGQGGDSRVSIPQTSTTTHPPGPILNSGLILNPHTQAAR
TMHISTFHPQAPAPQPMLPPHRLPKQPPIVQLSQQMQQHLNLVKPVLAKYPWPPTQTDVP
TPSQPDTLQHTNSLTLVHNGHWLPQQQHMLAGLDDHCHSLHPLVNSKTSQLGPHGAGQLK
QHQNNIHLQSQWQQHNQHLQVQLQSPCHFKQQKARSSSSATLNGVDPDPDWHSSSYDDQL
GLTANGANGACTVSYPNRHADTLTHATEGEVTQTDYGMGDLTTVGMVMNGVTVGGIGHYQ
GQGGVTANPSDHLVHHKQHSPQVPSTYFPQYSTTQNSLDYILGLSQPQLTMPTLDAYGIL
NSPASQDATLCKMENGCILNDTNVAYTGSCLLPNVNSQTTSDSLQPDALHTLPDPQTTGF
YL
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctggacggaaaagaagaaaaccggtgcaaagagacatcgaagtgaaagaccaa
aaagagaaacagaaagctccatctgaagggaccaagtctaacccatcaaaacgccaccgg
gaccgtctgaactctgagttggaccgtctggccagtctactgcccttcccagaggaggtc
acctccagcttggataaactctctatcttacggctcagcgtgagctatctgaggaccaag
aacttcttctcagttgccctgaagacccaggcttgcaagggtttgaaggccaacggtggt
aaccatgacagcagcgagacaacgggattggtggacggctggatgtccgagggtgaactc
ctattgcaggcccttaatggtttcatcctggtcatcactgcagacggagtcatattctac
tcctctcacaccattcaggattacctgggattccaccaaacggacgtgatgcaccagagt
gtgtttgatctgatccacactgaggaccagcaggagtttaggaggaacctgcactgggct
ctcaaccccccggccgtgccccagcaggtggagtcacccccagatggaaagccggtcccc
agctcgtccctggtgacctataaccccgaccagctgcctccagagaactcctccttcctg
gaaaggaacttcgtctgtcgcttccgctgtctcctcgacaactcttctggcttcctggcc
ctgaccctccaaggccgtctgaagttcctgcatggccagaactgccggctggatgacggc
tgtaacgtgcccccccagctggccctgtttgccatcgctacccccctccaacctccatcc
atcctggagattaggaccaagaacatgatcttcaggaccaaacacaagctggacttcacc
cccatggcctgcgacgccaaggggaagatcgtgctgggctacaccgaggctgagctccgg
gttcgaggctctggataccagtttatccatgcagctgatatgctctactgtgctgagaac
cacgtccgcatgattaagacaggggagagcgggctgacggtgttcagactgctcactaag
gataaccgctggaggtgggtccaagccaacgccagactggtctacaagaacggcaagcct
gactacatcatcgccacccagaggcccctggtggaggaggagggaggagagcacctgagg
aagcgttccatgcacctccccttcaccttcgccacgggcgaggcccttctctaccagagt
agctaccccatccacggcctcaccgactcactccaggctaaaggcaagaccaaatccaag
aagggcaagctggacaagaacccgtcgaaggataacggtggaatggaccccagctccctg
ctcggggcgctgatgaggcaggatgagtcagtgtacgtgtgccaaccagccgtcgagccc
aagatgtccttccacagtagtctgtttagtgagggaggtgaggggaaagggcagagcagt
ggatactatagcggtggccctctgggtgggggtgggggtgtgggagagagctggagctct
gtgcccaacggggttaccaccatctccactggcctcaacggggagcctccgtccagtttc
gacccgctgctcgccaccctggactcactgtctctggagggggacgagacatgctctaac
agtgagctgttctctgctctggagaacctgggtctgaacgcagaggatctggagctactg
ctgctggatgagaggatgatcagagtggagatggatccggactacatcccctcgctcaac
gacctgctcaccaacaacgagatcctcgcctacatccacgactcgctggagaacaagaca
gaggagggccagggtggggatagtcgcgtgtccataccacaaacctcaaccacaacccat
ccccctggccctatccttaattctggccttatccttaaccctcatacccaagccgcccgc
actatgcatatctctaccttccacccccaagctcctgcccctcaacccatgttaccccct
cacagactaccaaaacagccacccatagtgcagctctcccagcagatgcagcagcacctc
aacttagtaaagcccgttctggcaaaatacccctggcccccgacacaaacagacgtcccc
acgccaagccagccagacaccctgcagcacacgaactcactaaccttggtccataatggt
cactggcttccccagcagcagcatatgcttgcggggctggatgaccactgccacagcctt
caccccctggttaacagtaagacatcccagctggggcctcacggggccgggcagctcaaa
caacaccagaacaacatccatcttcagagccagtggcagcagcacaaccagcacttacag
gtccagcttcaatctccgtgtcatttcaaacagcagaaggctaggagcagcagcagtgcc
actctcaacggggtggaccctgatcccgattggcatagttccagctacgacgaccagttg
ggactgaccgctaatggagctaatggagcctgcaccgtctcctaccccaacaggcatgcg
gacaccctcacacacgctacagaaggagaggtcactcaaacggattacggtatgggtgat
ttgactaccgtgggcatggtcatgaacggggttacggtagggggcataggtcactaccag
ggacaaggtggggtgaccgctaacccctcagaccatctggtgcatcacaaacaacattct
ccacaggtcccatccacctacttccctcagtactccaccacacagaactctttagattac
atcctggggctgtcacagcctcaactcaccatgcctactctggacgcctacggcattttg
aatagccccgcttcccaggatgccactctctgcaagatggagaacggctgcatcctcaac
gacaccaacgtggcttacacagggagctgtctactgcccaatgtgaacagccagacaacc
agcgacagtcttcagcccgacgccctacataccctgccagacccacagactactggcttc
tacctctga
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