Oncorhynchus gorbuscha (pink salmon): 124008222
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Entry
124008222 CDS
T07892
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124008222
Cell adhesion molecules [BR:
ogo04515
]
Cadherins
Protocadherins
124008222
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
124008222
NCBI-ProteinID:
XP_046175305
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Position
LG02:complement(68263310..68268850)
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AA seq
1002 aa
AA seq
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MDLRGAKRRLGGIWQVTCLALVACVLDLVWAQIRYSIPEELEHGAFVGNIAEDLGLDVER
LSARRFRIVSGAKKQYLEVNLENGILFVNEIIDREELCEQSLSCSFHLQVVIENPLELYR
VEVEILDVNDNSPSFPWSEFNLDISESAVPGSRFPLESAQDLDVGSNSLRSYLLSVNEHF
VLDIQTRSDGSKFAELVLESPLDREQQNTHQVVLTAVDGGSPERSGTAQINITVLDANDN
APVFDQSFYRVRLVENAPKGTVVIKLNASDLDEGPNADITYSFSGHAPIKVRELFSVDSR
TGEIRVKGVVDYEKARMHEIYVQAKDKGPSAVAVHCKVLVNILDVNDNLPEVILTSVSTP
VQEDAPPGTVIAVISVMDKDSGENGNVDCEIPHHVPFQLHSSFKNYYTLVTCDFLDRETV
PEYNITLTARDMGAPPLFTRKTILVQVSDMNDNTPRFKQPSYTVYLTENNAPGASICSVT
ALDPDSDQNAYLSYSILEGDIHGMSVSTYVSINSDNGNIYALRSFDHEQLRNFQILVQAQ
DAGFPPLRANVTVNVFILDQNDNAPVIVAPLPQNGTAATEVVPRSVDAGYLVAKITAMDA
DTGQNSRLFYQVLQANDPSLFSVALYTGEIRTIRRFVEKDPIRQMLVILVKDNGQPPLSA
TVSIILSVVDNVPESLPDFGDLTLSPQYRSNLTLYLIVSLGVISFTFLVAIIVLAAIKGY
RDRHSIRRYNFSLSACCGFRSEESTTDVFKKSNLNVQITTGTKGSTNCVEANGNGPLSQP
YCYKMCLTPESSKSDFMFLKSCSPMNATPQKNNAKGADYPKSGWSAQDSRSLIVNNGATI
PNELKQANMDWTLTKNRRNSAHKSFSTMERTFPRRPRPDPDGFSCPVAPQYYTWGSHMRA
EYKMSSQIEGIGGVGSVGRVPNRSWTPSYTQPPSAQPPPDYQHNVYIPGTPSGYCTLKPA
PRGELDVYNSFSTFGKNKRFTSSYDPSFAQRGDNLINKDFFK
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggacctccgaggcgcgaagaggcggcttggggggatatggcaggtgacatgcctagct
ctcgtcgcatgtgtcctggatttagtttgggctcagattcgttattcaatccctgaggaa
ctggaacatggcgcatttgttggaaacatagccgaggacttgggtttagacgtcgagaga
ctctctgcgcgcaggttcaggatagtttcaggcgcaaaaaagcaatacttggaggtgaat
ttagaaaatggtattttatttgtaaacgaaataattgatcgagaggaactatgtgaacag
agtctgtcttgctctttccatttgcaagtggtaatcgaaaacccattggaactgtacagg
gttgaggtggagattttagatgtgaacgataactcacccagttttccgtggagtgagttt
aatttggatatatccgagtcggcggtacccgggtcccgcttcccactagagagcgcgcag
gacttggacgttggaagcaactcgctccgctcttatctgctgagtgtgaatgaacatttt
gtcctggacatccagacgcgtagtgatggcagtaagtttgcggagttggtcctggagagc
cccttggacagagagcagcagaatacgcaccaggtggtgctgacggccgtggatggaggc
tcgccggagagatccgggacagcgcaaatcaatataacagttctggatgcaaatgacaac
gcgcccgtgttcgaccagtctttctacagagtaaggctcgtggaaaacgcaccgaagggc
accgttgtgataaaactaaacgcatcggatttggatgagggtcctaatgcggatatcaca
tactctttcagcgggcatgctcccataaaagtgcgcgagctgttcagtgtggattcgcgc
actggagagatcagagtgaaaggtgtcgtagattatgaaaaggccaggatgcatgagata
tatgtgcaagccaaggacaagggcccatcggcagtggccgtgcactgtaaagttctagtc
aatatcttagatgtgaatgacaacctcccggaggtgatcttgacatcagtgtccacacct
gtccaagaggacgcaccaccggggactgtgatagctgtcatcagcgtcatggacaaagac
tcgggtgaaaatggaaatgttgactgtgaaattccacatcatgtccccttccagctccac
tcatcttttaagaactattatactttggttacttgtgattttttggacagagagacggtg
ccagagtacaacatcactctcacagcaagggatatgggcgcacctcccttgttcacaagg
aaaactattttggttcaagtgtcagacatgaacgacaacacaccccgattcaagcagcca
tcatacaccgtctatttgacagagaataacgcaccaggagcctcaatttgctcggttact
gccctggatccagattcagaccaaaatgcctatctctcttactctattctggaaggtgat
atacatgggatgtccgtgtccacctacgtctccataaactcagacaacgggaatatttac
gcattgcgttcttttgaccatgagcagctaagaaactttcagattttagtccaagcacaa
gatgccgggtttccacccctgagagccaatgttaccgtaaatgtctttattttagaccaa
aatgacaatgcaccagtcatagtagcacctctaccccaaaacggcaccgcagcgactgaa
gtggtgcccaggtcagttgatgctggctatcttgtggcaaaaatcactgcgatggacgca
gacacaggtcaaaactcgcgtctgttctaccaggtgctccaggcaaacgacccgagcctg
tttagcgtcgctctgtacacgggcgaaatcaggacgattcgccgatttgtggaaaaagac
cccataaggcaaatgctggtcattctggtcaaggacaacggtcagccacccctttcggcc
acagtttccatcatcctgtcagttgttgacaacgtgccagaatcgctgcctgatttcggc
gacctcacactgagcccccagtaccgctcgaacctcacgctgtacttaatagtgtctctg
ggcgttatctcgttcacgtttctggtggctattatcgtcctggcagcgataaagggatac
agggacagacattccattcggaggtataacttctctctgagtgcatgctgcgggttccga
tcagaggaatctaccactgatgtgttcaagaagtccaacttgaacgtgcagataaccaca
ggcaccaaaggatccacgaactgcgttgaggcaaatggcaacggccccctttctcagcca
tactgctacaagatgtgtctgaccccggaatcatccaagagcgatttcatgttcctaaag
tcatgcagtccgatgaatgcgactccacagaagaataatgccaagggcgcagactacccc
aaatcgggttggagcgcacaggactcccgcagcctgatagtgaacaacggagcaactatt
ccgaacgagctcaagcaagcgaacatggactggacattgacgaaaaatcgacgaaattca
gcacacaaaagctttagcaccatggagaggaccttcccacgtagacccaggccggaccct
gatggcttctcctgcccggtggcaccgcagtactatacctggggtagtcatatgcgtgca
gaatacaagatgtcctcccagatcgaagggattggaggggttggaagtgtaggaagggtt
ccaaaccgttcgtggactccgagctacacccagcctccatctgcacagccaccacctgac
taccagcacaacgtctacatccctggcacaccgtctgggtactgcactctgaagcctgca
cccaggggggaactggatgtctacaactcattctctacgtttggaaagaataagaggttc
acctctagctatgacccgagctttgcccagagaggggacaacctgataaacaaggacttt
tttaaatga
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