Oncorhynchus gorbuscha (pink salmon): 124008224
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Entry
124008224 CDS
T07892
Name
(RefSeq) CCR4-NOT transcription complex subunit 9 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124008224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124008224
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124008224
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
TPR_IPO11
Motif
Other DBs
NCBI-GeneID:
124008224
NCBI-ProteinID:
XP_046175306
LinkDB
All DBs
Position
LG21:45766853..45777742
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AA seq
302 aa
AA seq
DB search
MFRTPLVAVTTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSCG
TIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYP
FLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTV
ATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSD
NSSPHTRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRGIPLP
TQ
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgaacacctcttgtggctgtaaccacggctctggcccaagtggatagggaaaag
atctaccagtggatcaacgagctgtccagcccagagacccgtgagaatgccctgctcgag
ctcagtaaaaaacgggagtccgtgccagatttggctccaatgctatggcactcctgtggg
actatagctgctctcctgcaggaaatagtcaacatctacccctcaataaaccccccaacc
ctcaccgctcaccagtccaacagagtatgcaatgcattagcacttctgcaatgcgtggcc
tctcatccagagacaagatcggcatttctggcagctcacattcctctattcctgtacccc
ttcttacacactgtcagcaaaacacgaccatttgagtacctccgactcaccagcctagga
gtcatcggtgccttggtcaaaacagatgagcaggaagtgatcaacttcctgttgacgaca
gaaatcattcccctgtgccttcgcataatggagtctggcagtgagctttccaaaacggta
gcaacttttatactacagaaaatcctacttgatgacacagggctggcatacatttgccaa
acgtatgaacgcttctcccatgtggccatgatacttggaaaaatggttcttcagctctcc
aaagagccctctgctcgtcttttgaaacatgttgtccgctgttacctacgtctgtcagac
aactccagcccccacaccagagcccgagaggccctccgtcagtgtctaccagaccagctt
aaagataccacgtttgcccaggtcttgaaagacgacaccaccaccaaacgctggttggca
cagctggtgaagaacttacaggaaggccaagtcacagaccccaggggcatccctctgccc
acacagtag
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