Oncorhynchus gorbuscha (pink salmon): 124008338
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Entry
124008338 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: roundabout homolog 1-like
KO
K06753
roundabout, axon guidance receptor 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124008338
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
ROBO family
124008338
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
124008338
NCBI-ProteinID:
XP_046175466
LinkDB
All DBs
Position
LG02:complement(69152760..69375951)
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AA seq
1662 aa
AA seq
DB search
MRTMWVMWSVVTALLLAMLLSIAHSELQEGALVPDTDTRDRANEDSTPTPSSEHEDDNSL
GYTGSRLRQDDSPPRIVEHPSDLIVSKGEPATLNCKAEGRPAPTVEWYKDGERVETDRDN
PRSHRMLLPSGSLFFLRIVHGRRSKPDDGSYVCVARNYLGQAVSHNASLEVAILRDDFRQ
NPADVIVAAGEPAVLECQPPRGHPEPTISWRKDGTNINDRDERITIRGGKLMITNARKSD
AGKYICVGTNMVGERESETAELTVLERPGFVKRPSSVMVLADESVEFHCEARGDPVPTVR
WRKEDADLPKGRYEILEDHTLSVRGVAPSDEGSYTCVVENMVGKAEASATLTVHVFTVPP
AFAMRPRNQVVAVGRMVTFQCEATGNPQPAIFWQREGSNSLLFSYQPPQPFSRLSVSQTG
SLTIADAQRSDAGYYSCQALNIAGSVITKALLEVTDMVSDRPPPVIRQGPANQTAPVDST
VVLGCIATGTPTPTVHWKKDGVVVSSDDSRITQIDTGALQIRYTKLGDTGVYTCLASSPS
GEASWRAYVEVQEFGVVVQPGRPTDPNLIPSAPSKPDVTDVSRTSVTLSWKPNPNAGATP
TSYVIEAFSHASGSSWVTLADHVKTETFVLKNLKPGAVYLFLVRAANAYGLSDPSPITDA
VRTQDTPPTSQGVDHRQIQRELGDVVVNLHNPTILSSSSVRVQWTVEQESPYIQGYKVMY
RASADLGQPGGQWGVFEVRTPGEDGAVVPQLKKGVTYEFKVRPFFDEFQGADSEVKVART
LEEAPSGAPRGVTVTKSDANGTAILVAWQPPSEEEQNGMVQEYKIWCLGNESRYHVNRTV
DGSTFSVLIPSLAPGIRYSVEVAASNGAGPGVKSDVTFFQLDSTGQMMDSPEDQDTLSQI
SDVVKQPAFIACIGATCWVVLMVFSVWLYRHRKKRSGLSSSYAGIRKVPSFTFTPTVAYQ
RGGESVCSAGRPGLLNMGESVNQPWLADSWPNACANHKDCNINCCNSGNGTSDSNMTTYS
RPADCIANYGSQLEKQQGVLLGPEQAVYSDVDLSNKLNELKTFNNPSLCYVGPGGGPPTP
YEPTPYATTQLIQSSILNKAAAAGAGAPDIRCWNQPPSHLQKTQMQYNIMEQNNRLNKDH
YRGDGPLQGTVPYNQAHEHSTGGSHHSSDRGSSSTSGSQSHKKGTRTPKLPKTNTVNWGE
PLPPPPANPPPSRSCDEYTLPMEKSFNPDAPCPMLTSRMYLHPDEMEEEEQEAAEGMDRC
PTPPVRGAASSPAGMSYSHQSTATLTPSPQGEQHNGLHNGTDHHRQHAASPPPPPHPLSP
PHTYGYISSPLPLDTDGQEEEEEDEEEEGDEMDAEMAQGHYHQHQNNPQPHQKQPHHQHH
PPPRRLHLRGLEQTPASSTGDLESSVTGSMINGWGSASEEDNGSSGRSSAVSSSDGSFFT
DADFAQAVANTGDYTAGLRMARFPEDTGPAGRRSQRPSSPLSTDSNMSSAVMQKRPPKRH
KQHQAQAGHQGHQQRNDFTDDSCMPLKSPSHMSRCGYEVRGATLPRIGSGEGRGRRGSAG
GQRTREGSVERREAQDKNRTPQGGKGSNKGRQHPGSEDILPYSRPSFPSVQGQSQGQSSS
SSMSSRGSGGRRRDGARRNPTDTLPSIAGFQTQEEELELLES
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccatgtgggtcatgtggtcagttgttacggctctccttctcgccatgctgctc
agtatcgcccattcagagctgcaggaaggagccctcgttccagatacagacacacgggat
agggccaatgaagattccacccccaccccctcgtctgaacatgaagatgacaactctcta
ggctatacaggctctcgtcttcgtcaggatgactcccctccccggatagtggagcacccc
tctgacctcattgtgtccaagggggagccagccaccctcaactgcaaggcggaggggcgt
cctgcccccacggtggagtggtacaaggacggggagcgtgtggagacggaccgggacaac
ccccgttcccaccgcatgctgctgcccagcggctccctcttcttcctacgtatcgtccac
ggccgacgcagcaagccagacgacggcagctacgtgtgtgtggcccgtaactacctgggc
caggccgtcagccacaacgcctcgctggaggtagccattctccgtgatgacttcagacag
aacccagcggatgtgattgtggcagcgggtgagcctgccgtgctggagtgccaaccgccc
cgtgggcatcctgagcccaccatctcatggaggaaagatggcaccaacatcaacgaccgg
gatgagcgcatcacgatccgcggtgggaagctgatgatcaccaacgccaggaagagtgac
gcagggaaatatatatgtgtggggaccaacatggtgggagagagggagagcgagactgcc
gaactgactgtactagagcgcccagggtttgtgaagaggcccagtagtgttatggtgctg
gcagatgagagtgtggagttccactgtgaggcgcggggagatccggtccccactgtccgc
tggaggaaagaggatgcagacctgcccaaggggaggtatgagatcctggaggaccacact
ctgagtgtgcgtggtgtggcaccatcagacgagggctcctacacgtgtgttgtagagaac
atggtgggaaaggcagaggcgtccgctacgctgaccgtccacgtcttcactgtgccccca
gcgtttgccatgcgccccagaaatcaggtggtggcagttgggagaatggtcaccttccag
tgtgaggccactggcaacccccagcctgccatcttctggcagagggagggcagcaatagc
ctgcttttctcctaccagccacctcagcccttcagccgactttccgtgtcccagacaggc
agtctgacaatcgcagacgcccagcgctcagacgccggctactacagctgtcaggccctc
aacatcgctggctccgtcatcaccaaggccctgctggaggtcactgacatggtgtcagac
cgcccccctcccgtgatccgacagggcccagccaatcagacggcacctgtggacagcaca
gtggtcctgggttgcatagcaacaggaacccccactccaacagtccattggaagaaagac
ggggtggtagtgtcctccgatgactcccgcatcactcagatagacacaggagccctgcag
atccgctacactaagcttggagatacaggcgtatacacctgtttggcgtccagccccagt
ggagaggcatcttggagggcctacgttgaggtgcaagagtttggagtggttgtccagccg
ggtcgacccacagaccctaacctgatccccagtgccccgtccaagcctgacgtgactgac
gtcagccgcacctctgtcacactgtcttggaaacccaaccctaacgctggggccacgccc
acctcctatgtcattgaggcattcagtcacgcgtcggggagtagctgggtgactctggct
gatcatgtgaagacggagacctttgtcctgaagaacctcaaaccaggtgccgtctacctg
ttcctggttagagcagccaacgcctacggcctcagtgaccccagccccatcactgatgcc
gtcagaacacaagacactcctcccaccagccaaggggtggaccaccgtcagatccagagg
gaactgggggacgtggtggtcaatctgcacaaccccaccatcctctcctcctcctccgtc
agggtgcagtggacggtggagcaggagtctccgtacatacagggctataaggtgatgtac
agggcgtctgctgatctgggccagccaggtgggcagtggggcgtgttcgaggtgcggact
cctggagaggacggtgctgtggtgcctcagctgaagaaaggggtcacctacgagttcaaa
gtgcgtcccttctttgatgaatttcagggagcggacagcgaggttaaggtggccaggacg
ctggaggaagcccccagcggagccccccggggcgttaccgtgacgaagagcgatgccaac
gggactgccatcctggtcgcctggcaaccaccttccgaagaggaacagaacggaatggta
caggagtacaagatctggtgcctgggcaacgagagccgttaccacgtaaaccggacagta
gatggctccaccttctccgtgctgatccccagccttgcgccagggatacgctacagcgtg
gaggtcgccgctagcaatggcgccggccctggggtcaagagcgatgtcaccttctttcaa
cttgactctacgggtcagatgatggacagccctgaggaccaggacacgctgtctcagatc
tcagacgtggtcaagcagccggcgttcattgcgtgcatcggtgccacctgctgggtggtc
ctcatggtcttcagtgtgtggctgtatcgtcaccgtaaaaagaggagcggcctcagcagc
agctacgccggcatacgcaaagttccatcattcactttcactcctacagtggcctatcag
agaggaggggagtctgtctgcagtgctgggagacctgggctgctgaacatgggggagagt
gtaaaccagccgtggctggcagactcctggcccaacgcatgtgccaaccacaaagactgc
aacatcaactgctgcaacagtggcaacggcaccagcgacagcaacatgaccacctacagc
cgcccagccgactgcatcgccaactatggcagccagctggagaagcagcagggggttctg
ctggggcctgagcaggctgtgtacagcgacgtggacctctccaacaaacttaacgagctc
aagactttcaacaaccccagcctgtgctacgtgggccccgggggagggccgcccaccccc
tacgagcccaccccctatgccaccacccagctcatccagtccagcatcctgaacaaggct
gcagcagccggggccggggcccctgacatccgctgttggaaccagcccccctcccacctg
cagaaaacacagatgcagtacaacatcatggagcagaacaacagacttaataaagaccac
tatagaggagatgggcctctgcaaggcaccgtcccctataaccaggcccatgaacacagc
acaggaggctcccaccacagttctgacaggggcagcagcagtacctctgggagccaaagt
cataagaagggaactcgcactcccaaacttcccaaaactaacacagtgaactggggtgaa
cctctgccccctccccctgccaaccccccaccaagccggagctgtgatgagtataccctg
cccatggaaaaaagctttaacccagatgccccgtgcccaatgcttacctcacggatgtac
ctgcatccggatgagatggaggaggaagagcaggaggcggcggaggggatggataggtgt
cccaccccccctgttaggggggcagcctcttcccctgcgggtatgtcctacagccaccag
tctacagccactctcaccccctccccccagggagagcagcacaacggcctacacaacgga
acagaccaccacagacaacacgcagccagcccacctcctcccccgcaccccctctccccc
ccacacacctacggctacatctccagccccctgccactggatactgacggccaggaggaa
gaggaggaggatgaagaagaggaaggggatgagatggatgcggagatggcccagggtcac
tatcaccagcaccaaaataacccccagccccaccagaaacagccccaccaccagcaccat
cctcccccacgcaggctgcacctccgagggttggagcagacgccggcctccagcactggg
gacctggagagctctgtgacgggctccatgatcaacggctggggctcggcctccgaggag
gacaatggctcgtcaggacgctccagtgctgtcagctcctcagacggatccttcttcaca
gacgcagacttcgcccaggctgtggccaacactggagactacacagcaggtctacgcatg
gccaggttcccagaggacacagggccagcagggcgaaggagccagcgtcccagcagcccc
ctgtccacagacagcaacatgagctctgcagtgatgcagaagagaccgcccaagaggcac
aagcagcaccaggcccaggctggccaccaaggccaccagcagaggaacgacttcaccgac
gactcgtgtatgcccttgaagtctcctagtcacatgtcgcggtgtggctatgaggtgagg
ggggccacactccctaggattggctctggggagggacggggccggagagggagtgcaggg
ggccagaggaccagagagggctctgtggagagacgtgaggcgcaggacaagaacaggact
ccacagggaggcaaagggagcaacaaaggtcgtcaacacccaggttctgaagacatcctc
ccatacagcaggccctcgttcccctcggtgcagggccagagccagggtcagagctcctcc
agctccatgtcctcccggggctcagggggacggaggagagatggggcccgcaggaacccc
acagacacactgcccagcatcgcaggcttccagacccaggaagaggaactagagctgctg
gagagctga
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integrated database retrieval system
