Oncorhynchus gorbuscha (pink salmon): 124008491
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Entry
124008491 CDS
T07892
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124008491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogo04121
]
124008491
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124008491
Ubiquitin system [BR:
ogo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124008491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
zf_RING_Vps8_fungal
PHD_NSD
zf_RING_Vps8
zf-ANAPC11
zf-RING_Vps41
zf-UDP
Motif
Other DBs
NCBI-GeneID:
124008491
NCBI-ProteinID:
XP_046175752
LinkDB
All DBs
Position
LG21:26542902..26559432
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AA seq
779 aa
AA seq
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MNNDFNDLLIRLNKETKYCCTCTEYQHGRRRMLLASAVVVWEWLNEHGRWRPYSPAVSHH
IEAVIRNDPRGGSVVLGQVDSRLSPYIIDLHSMHQFRQDTVLWRDPRLSTVTPGTLRPVR
RSFYDPTSAPGQGWLWEWENDTGSWTAYDTEVGIAIQAARDRQQPWLDLAPLGFCYLIDF
QSMTQINGQTQRCRRIQRRSDLAYPLVSGPLPKTHHAWGPSPAGLPGVGVSGVGMGNGNG
SAYPSGALPASAITSLGQPCACQQCMLVLSVKAGAMATAHTLGRRPPQNKPPSPKLGGGY
SAMGGSYSLTLPRPPSSMARSLSPHRTSAGGASGGVGVGGGFAHSLSLLGSATAALSLTS
TRPPPPPLPPLPPPPPPPPSSIASSVILPPSSSFSMASSGPPSMPAPAPLLISTATSSCT
PSPSARVLGPVSSAAAACAAPLPPRASLAGLSRPALQRIAMAQSRALIASGVPTVPVKNL
NGSSPVHPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSDIKPVPGLGHCCRKTTK
KQARKGKTPEEVVKRYLQKVRNPPEEDCTICMEALAGPSGYKGPGVGGIQRAESVGRLAQ
CGHQYHLQCLVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHSLPGHPDCK
TIRIIYNIPPGIQGPEHPNPGKPFTARGFPRHCYLPDSEKGRKVLKLLLVAWDRRLIFSV
GTSSTTGESDTVIWNEVHHKTEFGSNLTGHGYPDPGHLDNVLEELKAQGITEEECLPRD
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgattttaatgatttattgattcgcttgaacaaagaaacgaaatattgttgc
acctgtacagaatatcaacatggaaggcgtaggatgttactagcgtcggccgtggtggta
tgggaatggctgaacgagcacgggcgctggcggccttacagcccggccgtctctcaccac
atcgaggcagtcatccgcaacgacccacggggtggtagtgttgtcttaggccaggtggac
tctcgcctctcgccctacatcatcgacttgcattccatgcaccagttccgacaagataca
gttctgtggcgtgaccctcgtctctctaccgttaccccaggtaccctccgaccggtgcgt
cgcagcttctacgaccccacttcggcgccgggccagggctggttgtgggagtgggagaac
gacacaggctcgtggacagcctacgacacagaggtgggcatcgccatccaggcagcacgc
gaccgtcagcagccctggctggacttggcgccactgggcttctgctacctcatcgacttt
cagagcatgacccagatcaatgggcagacgcagcgctgccgccgcatccaacgccgctcg
gacttggcctaccctctggtgtcggggccccttcccaagacacaccacgcctggggaccc
agccctgcaggactgccgggggtgggggtttccggagtgggcatggggaacgggaacggt
agcgcctacccaagcggcgccctgccggcctctgccatcacatcgctgggccagccctgc
gcctgtcagcaatgcatgctggtcttgagcgtcaaggcaggcgccatggcgacggctcac
accctgggcaggaggccacctcagaacaagccgcccagccccaaactaggtggtggttac
tcggccatgggggggtcttactcgttgactctcccccgccccccctcctccatggccagg
tccttgtccccacacaggacgtccgcaggcggggctagcggtggtgtaggggttggcggc
ggcttcgcccactcgctctccctcctgggttcagccaccgccgcactctccctcacctct
acccggccccctcccccgccgctacccccccttccgcctcctccaccgcctccgccctcc
tccatcgcgtccagtgtcattcttcctccctcctcttccttctccatggcgtcctccggc
cctccgtcaatgcccgcgccggctcctcttctcatctccacggcaacctcctcctgcacc
ccctcaccctccgcccgtgtcctggggcccgtgtcttcagcagcagcggcctgtgcagcc
cccctgccacctcgtgccagccttgccgggctcagccgacccgccctgcagcgcatcgcc
atggcccagtccagagccctcatcgcctccggtgtcccaacggttcctgtgaagaacctc
aatggatctagccctgtccaccctgcattggcaggtattacagggatcctgatgagcgcc
gcaggacttcctgtctgtctgacccgccctcccaaactggtgctccaccccccgcccgtt
agcaagagtgacataaagcccgtccccggcctcggccactgctgccgcaagaccaccaag
aagcaggcccgcaaaggcaagacccctgaggaagtagtgaagaggtaccttcagaaggtc
cgcaaccccccagaggaggactgcactatctgcatggaggccctggctgggccctcggga
tacaagggccccggagttgggggaatccagcgggcagagtcggttggtcgcctggctcag
tgtgggcaccagtaccacctgcagtgcttggtggccatgtacaacaacggcaacaaggac
ggcagcctacagtgccctacctgcaagaccatctacggcgtgaagacggggaaccagcca
cccggcaagatggagtaccacgtcatcccccactcgctgcccggccaccctgactgcaag
accatccgcatcatctacaacatcccccccggcatccaggggcctgagcacccgaacccg
ggcaagccattcactgcccggggattcccccgacactgctacctccctgatagcgagaag
ggacgcaaggtactgaagctgctgctggtggcgtgggaccgccggctcatcttctcggtg
ggcacgtccagcaccacgggcgagtcggacacggtcatctggaacgaagtgcaccacaag
actgagtttggctccaacctaacaggccatggctaccccgacccaggccacctggacaac
gttctggaggagcttaaggcccaggggatcacggaggaggagtgcctacccagagactga
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