Oncorhynchus gorbuscha (pink salmon): 124008557
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Entry
124008557 CDS
T07892
Symbol
adamts1
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 1
KO
K08617
a disintegrin and metalloproteinase with thrombospondin motifs 1 [EC:3.4.24.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
124008557 (adamts1)
Peptidases and inhibitors [BR:
ogo01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
124008557 (adamts1)
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Gene cluster
GFIT
Motif
Pfam:
ADAMTS_spacer1
TSP1_ADAMTS
ADAMTS_CR_2
Reprolysin
TSP_1
Reprolysin_5
TSP1_spondin
Adt-1
Reprolysin_3
Pep_M12B_propep
ADAMTS_CR_3
Reprolysin_2
TSP1_CCN
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
124008557
NCBI-ProteinID:
XP_046175881
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All DBs
Position
LG21:42218556..42226225
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AA seq
946 aa
AA seq
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MMWFVCFSFCLITALCVSAAHGTWEESTVVPVRLDPVRPEREAEQGRTLSVEEREKESEM
RVYRLDVFGKRVVLELEPDQTFLAPGFVFHVVGSPELQAQRDSDSSTAETQCFFSGTVNG
EEDSAAALNLCHGLRGGFYLQGEEYFIYPNNSTDAQPIDGDLHLIRRRGQASFAEESSSK
CGVNEDEDRLPENQETKVDHGTTNSDHPAHHQRSKRFVSTPRFVEIMIVADQSMAEFHGA
GLKPYLLTIMAVASRLYRHPTIHNSISLAVVKLLVVYEEESGPQVSSNAALTLRNFCQWQ
RQHNPPSDRHPEHYDTAVLFTRTDLCGAHSCDTLGMADVGTVCDPERSCSIIEDDGLQAA
FTVAHELGHVFNMPHDDSKQCASVNGDHWGSHMMASTLSNLDQLQPWSPCSALMVTSFMD
NGHGQCLLDKPHKSQPLPATLPGTVYDADRQCRLTFGEESQHCPDLSTTCVALWCTVTTT
NGLLVCQTKNFPWADGTLCGHDSFCLAGHCLSKTEAARHQTPVNGAWGVWGQWGDCSRTC
DGGVQYSFRDCDNPLPKNGGKYCEGKRIQYRSCNTEICPGSNGVSFREEQCLAHNDISSQ
VSFGSGEGVEWVPKYAGVSPKDRCKLVCRAKGTGYFFILKPKVADGTPCSPDSTSVCVQG
QCVKAGCDRIIGSSRRFDKCGVCGGNGSTCKKVSGALERARPGYQNVVTIPAGATHLDVK
QRAPGGGRHDNSYLAVLRQDGTYLLNGDYKLMTLETDIALKGALLRYSGSSASLERLRSF
SPLPEALTIQVLSVGDSPRPRVKYSYFAPRPTLASPSGGTVARRQSINAIRELGDAEWTL
REWGPCSQSCGGGTQQREVLCLDPQGRPSRECPEELRPLASRPCATQLCPSWFLGEWSAC
SKSCGRGFRKRPLRCVGHNGRTLAHESCDPKDRPRPLLDLCNQSTC
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggttcgtttgcttctcgttctgtttgattaccgctctgtgcgtgagcgcggcg
cacggcacatgggaggaaagtacagttgtaccggttagactcgacccggttcggccggag
agggaagccgagcagggccggaccctttcggtagaggagcgagagaaggagtcggagatg
cgggtctaccggttggacgtatttggcaaacgggtggtcttggagctagagccggaccag
accttcctggcacctgggtttgtgttccatgtggtggggagcccggagttgcaggcgcag
cgggactctgacagcagcacagccgagactcagtgcttcttctcgggcacggtgaacggg
gaggaggactccgcagctgcgctcaacctgtgccacggactacggggcggcttctacctc
caaggtgaagagtacttcatctatcccaataattcgactgatgcacagcctattgatggg
gacctccacctcattcgccggagaggtcaggcatcttttgcagaggagagcagctcaaag
tgtggggtcaacgaggacgaggacaggttgccagagaatcaggagacaaaagtagaccat
ggaaccactaactcagaccacccagcccaccaccagcggtccaagcgctttgtgtccacg
ccccgcttcgtggagatcatgatcgtggccgatcagtccatggccgagttccacggtgcc
ggactcaagccctacctgctcaccatcatggcggtggcatcgcgcctctaccgccacccc
accatccacaactccatcagcctagccgtggtcaagctcttggtggtctacgaggaggag
agcggcccccaggtgtcgtctaacgctgccctgactctccgcaacttctgccagtggcag
cggcagcacaacccgcccagcgaccgccacccagagcactacgacacggccgtgctcttc
acccgaacggacctgtgcggcgcccactcctgtgacacgctaggcatggcggatgtgggc
acggtgtgcgacccggagaggagctgctccatcatcgaggacgacgggctgcaggcggca
ttcaccgtggcacacgaacttggccacgtgttcaacatgccccacgatgattccaagcag
tgtgccagcgtcaacggtgaccattggggctcgcacatgatggcatccaccctgtccaac
ctggaccaactccagccctggtcgccttgctccgccctcatggtcacctccttcatggac
aacggacacggccagtgcctattggacaagccccacaagtcccagccgctgcctgccacg
ctacccggaaccgtgtacgacgctgaccgccaatgtcgcctgactttcggggaggagtca
cagcactgtcccgacctgagtaccacatgtgtggcactctggtgcacagtgaccacaacc
aacggactgctggtctgtcagaccaagaacttcccgtgggcggatgggacgctgtgtggc
catgacagcttctgcctggcgggacattgtctgagcaagactgaggccgctcgtcaccag
actccagtgaacggtgcctggggagtatggggacaatggggagactgttcccgtacctgc
gacggaggggtgcagtactccttcagggactgtgataaccctctgcccaaaaacgggggc
aagtactgtgagggcaagaggatccaatatcgctcctgtaacacagaaatctgccctggt
agcaatggtgtgtcattccgcgaggagcagtgtctggcccacaacgatatttcgtcacag
gtctcattcggttcgggagagggcgtggagtgggttcccaaatatgccggtgtctcgccc
aaagaccgctgcaagctggtgtgccgggccaagggcacaggctacttcttcattctgaaa
cccaaggtggctgacggtactccctgcagcccagactccacctcagtgtgtgtgcagggt
cagtgtgtgaaggcgggctgtgaccgaatcatcggctccagccgtcgcttcgacaagtgc
ggcgtgtgcggaggcaacggctcaacctgcaagaaagtgtcgggtgccctggagcgtgcc
aggcctggttaccagaacgtcgtgaccatccccgctggcgccactcacctggacgtgaag
caacgtgcccctggtggtggtcgccatgacaacagctacctggcagtgttgcgccaggac
ggcacctacctcttgaacggcgactacaagctgatgactctcgaaacagacatcgccctc
aagggggcgttgctacgatacagcggtagctccgcctccctggagcgtctacgcagcttc
tcgcccctccccgaggccctgaccatccaggtattgtctgtaggtgactcgccccgtccc
cgtgtcaaatacagctactttgccccgaggcccactttggcgtcacctagtggtggaacg
gtggcacgccgccagtccatcaatgccatccgggagctgggggatgctgagtggaccctg
cgggagtggggcccatgctcgcagagctgtgggggcggtactcaacagagggaggtcctg
tgtctggatccccaggggcggccatcgcgggagtgcccggaggagctgcgcccgttggct
tcacgcccttgtgccacacaactctgtccttcatggttcctgggggagtggtcggcgtgc
tccaagagctgtggccgtgggttccgcaagcgcccgctacgctgcgtgggacacaacggg
cgtacgctcgcccacgagagctgcgaccccaaagacaggcctcgacctctgctggacttg
tgcaaccagagcacctgttaa
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