Oncorhynchus gorbuscha (pink salmon): 124008561
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Entry
124008561 CDS
T07892
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 5
KO
K08620
a disintegrin and metalloproteinase with thrombospondin motifs 5 [EC:3.4.24.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
124008561
Peptidases and inhibitors [BR:
ogo01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
124008561
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GFIT
Motif
Pfam:
ADAMTS_spacer1
ADAMTS_CR_2
Reprolysin
Reprolysin_5
Reprolysin_3
TSP_1
TSP1_ADAMTS
ADAMTS_CR_3
TSP1_spondin
Reprolysin_2
Pep_M12B_propep
Reprolysin_4
Peptidase_M10
DUF4953
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
124008561
NCBI-ProteinID:
XP_046175886
LinkDB
All DBs
Position
LG21:42185139..42213588
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AA seq
962 aa
AA seq
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MTRVFCAFAGVMMVFRVILLCIMELHTGCDAVLAAGLTTFRAFAPPAQEGVVRTVDRIYH
GGGKVGYLLYMDGRRFQLDMERDESILSHHFSPKYVMALMGAVEGAAPLHRECVYRGTVD
SNPESLAVFSLCGGGLEGFFALKHARYTITLLIRSKGHDNDVRSLDDKDAKSALHYFTRE
RFSFEAMPVSESCGTKEGRGRMDAPRKHRRKGRGKGKRDRHGVTLDRGEERSRAHGRRWW
TQLSKPASPPSLGSRRKRSVSRARHVELLLVADESMSKKYGKDLHHYLLTLSSIASKLYG
HASIENPIRLSVVKVTMVTEKEKGLDVSKNAAATLKSFCKWQNQQNPLDDDNQHHHDAAI
LFTRQDLCGHHSCDTLGMADVGTICSPERSCAVIEDDGLHAAFTVAHEIGHLLGLSHDDS
KFCEERFGASADKRLMSSILTSIDASKPWSRCTSATITDFFDDGNAECLLDSPRLPLLGS
EELPGQSYDAVRQCRLAFGPEYTVCPGMDVCARLWCAVIRQGQMVCLTKKLPAVEGTPCG
KGRICLQGKCVDKTRKRHYSASNHGSWSSWGPWGACSRTCGGGVQFAQRLCNNPPPRNNG
RYCTGKRAIYKSCSVTPCPSPSKSFRQEQCELRNGPQTDPKGVKTFVEWVPKFAGVLPKD
VCKLTCRAKGTGYYVVFSQRVADGTECRPYSSSVCVKGKCVRTGCDGIIGSKLQFDKCGI
CGGDSTGCIRVIGNFTKKSKGYTDVVKIPAGSTHIKVRQHKPKDQPRYTAYLALRRPGGD
YLLNGKFMISTSETVIPLNGSVLNYSGWSQRDEWLHSMGPGALREALTVQILATDAKRPL
DIRYSFFMSRRVSAPPPPPPPHTSTTTPTTTTTTTTSTRSSSRTISAPFLALALSTAPGV
STAAAASGPQWVTGPWMICSRTCDTGWQSRTVQCKDPQAKLAKGCPLGDRLSAFKQCLVK
KC
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtgtcttttgcgcttttgctggagtcatgatggtgtttcgcgttattttgctg
tgcatcatggagttgcatactggctgcgatgccgtgctcgccgccggtctcaccactttc
agggctttcgctccacctgcacaagagggtgttgtacggaccgtcgatcggatttaccat
ggaggtgggaaggttggttacctactctacatggacgggagaaggtttcagttagatatg
gagagggatgagtcaattttgtcacatcacttcagtccgaaatatgtgatggccctgatg
ggggcggtagaaggcgccgcgcctctgcaccgggagtgtgtttacaggggaaccgtggac
tccaaccccgagtccctggcggttttcagcctctgtggtgggggtctagagggatttttc
gctttgaaacacgcacgctacacaatcacacttctcatccgaagcaagggacacgataac
gacgtgcgttcgctggatgacaaggatgcgaagagcgcgctccactacttcacgcgggag
cgcttcagcttcgaagccatgcctgtgagcgagagctgtgggaccaaggaagggcgcggg
cgcatggatgcaccgaggaaacaccggcgtaagggtcgagggaaggggaaacgcgaccgg
catggtgtcaccctggacaggggcgaggagcgcagcagagcgcacggcagaagatggtgg
acgcagttgtccaaacctgcctctccaccctcactgggaagtcggcgcaagaggtcggtt
tcgcgcgccaggcacgtggagctcctgctggtcgcagatgagtccatgtccaagaagtac
ggcaaggacctgcaccactacctgctcacgctgtcctccatcgcttccaagttgtacggt
catgccagcatcgagaaccccatccgtctgtccgttgtgaaggtgaccatggtcacggag
aaggagaaggggctggatgtgtccaagaacgcagccgccacgctcaagagcttctgcaag
tggcagaaccagcagaacccactggacgacgacaaccagcaccaccacgacgccgccatc
ctcttcaccaggcaggacctgtgtgggcaccactcgtgtgacacactgggcatggccgac
gttggcaccatctgttcaccagagaggagctgtgctgtcatagaggacgacggactccat
gccgccttcaccgtggcacacgagataggtcacttgctgggcctgtctcacgacgactcc
aagttctgcgaagagcgtttcggcgccagcgcggacaagcgtctcatgtcgtccatcctg
acctccatcgacgcctccaaaccctggagccgctgcacctcagctaccatcacggacttc
tttgacgatggcaacgccgagtgtctcctggactccccccgcctgcccctgctcggctca
gaggagcttcccggccagagctacgacgctgtgcgccaatgccgcctggcgtttggaccc
gagtacacggtctgcccgggcatggacgtgtgcgcccgcctgtggtgcgcagtgatacgc
caggggcagatggtgtgcctgaccaagaagctgcccgccgtggagggcacgccgtgtggc
aagggtcgcatctgcctccagggaaagtgtgtggacaagacccgcaagagacactactcg
gcatctaaccatggtagttggagttcatggggtccgtggggggcatgttcgaggacgtgt
ggtggaggggtgcagtttgcccagcgtctgtgtaacaacccgccgccccgaaacaatggg
cgctactgcaccggcaagagggccatctacaagtcctgcagcgtcaccccgtgcccctcg
cccagtaagagtttccgccaggagcagtgtgagttgcggaacggcccccagacagaccct
aagggggtgaagacctttgtggagtgggtacccaagttcgcaggggtgctacctaaagat
gtgtgcaagctgacctgccgggccaagggcacaggctactatgtggtgttctcgcagagg
gtggcggacgggacagaatgtcgaccgtacagcagctcagtgtgtgtgaagggcaagtgt
gtgcgtaccggctgtgacggcatcatcggctccaagctgcagtttgacaagtgtggcatc
tgtggaggggacagcaccggctgcatccgggtgatagggaacttcaccaagaagagtaag
ggctacacagacgtcgtgaagatcccagcgggctccacccacatcaaggtccgccagcac
aagcccaaggaccagccccgctacacagcctacctggccctgcgtcgtcccggtggcgac
tacctcctcaacggcaagttcatgatctctacctcagagacggtcatccccctcaacggc
tcggtgctcaactacagtggctggagccagcgggacgagtggctacacagcatgggccct
ggggccctcagagaggcccttacagttcagattctggccacggacgccaagaggcccctg
gatatccgctacagcttcttcatgtcccgtcgtgtttcggctccaccgccaccacctccc
ccgcacacctccacaactacacccaccactactactacaacaaccacctctactagatca
agcagtagaaccatatcggccccgtttttggccctggctctctctacagccccaggggtg
tcgaccgcggcggcggcctctgggccccagtgggtgactggcccctggatgatctgctcc
aggacttgtgacacaggctggcagagccgcacggtgcagtgcaaggacccgcaggccaag
ctggccaagggctgccctctgggcgaccgcctctccgccttcaaacaatgcctggtgaaa
aagtgttga
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