Oncorhynchus gorbuscha (pink salmon): 124008658
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Entry
124008658 CDS
T07892
Symbol
lrp10
Name
(RefSeq) low-density lipoprotein receptor-related protein 10
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124008658 (lrp10)
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
124008658 (lrp10)
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
UL42
Phage-tail_3
Motif
Other DBs
NCBI-GeneID:
124008658
NCBI-ProteinID:
XP_046176093
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Position
LG21:18160151..18167482
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AA seq
801 aa
AA seq
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MTASFNLCVLNVLFVTAYSSLELASSTAHCGQSPQVLEAPRGEIRSSVHHSWSYRPRPFN
CSWIIKAHVGEPVILSFSQFSTRCKKEWVSVTSSTGKPITFCGSDLPKPMELMGGNITVT
HHFLPHLFPVSVFCLGYVRDSGECPVVDFECLGGRCLPLSWRCNGQTECLGEGMGLGTDE
QECDGEIEIQDPEHDKVVVTTATPESYIEREGETGREKSGGRDWETAPVEVEKEEKEVEE
DGDYTKVKEPDNPMEDYWEFLPRQLPSPQPHRAHPSPGVTQAPIEWPCGGLLQTFYGTFA
PPSIKGPPLFCVWTLDPQDSRPLKLDLQLLELGPGDTVTITNRQQGTGELIKTITSESSY
KAIQVESRTGLLSLTYHTLPGSEGLGFNATYRVGGYCPPWEGKCGGAAGGCYTQEQKCDG
RWDCPETGHDEAGCRGCPRDQFACGGVGQRAVLAGHNFIGRPVCFPAKERCNYQLYCADG
SDEKDCTICQPGTFHCDSNRCVFESWSCDGQVDCKDGTDEMNCTMTLPRKVITAATVGSL
VCGLLLVIAMGCTCKLYSLRTREYSMFAPISRQEAELIQQQAPPSYGQLIAQGIIPPVED
FPTENPNESSSLSLRGFLQLLRQDTSNSPRRRRRPRFIRRAVRRMRRWGLIPRSASRPSQ
PSSSAPQLTDAPSTGVDPSQSTPATTSLAVEAVNLPLPQKLGLLPQTVQYQPPPPPHFLP
PPTLLPPPIVSTPATPRALQWLSPHPQQPLPSLSLPLFGAHYLSLPLLPFLLLPHQLTAP
LHIPLFLFLLFGGRGATYPPL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgactgcctctttcaacctttgtgtcctcaacgttttgtttgtaactgcctacagcagc
ctggagctggcctccagtactgctcattgtggacaatctccccaagtcctggaagctccg
aggggagagatcagaagctccgtccaccacagctggtcctaccgcccacggccgttcaac
tgtagttggattatcaaggcacacgtaggagagcccgttatcctcagtttctcccagttt
tctacacgctgtaagaaggaatgggtctcggtgacatcatcaactggcaagcccattacc
ttttgtggttccgacctgccaaagcccatggagttgatgggggggaacattacagtgacg
caccacttcctgccacacttattccccgtctctgtgttctgcctgggctacgtcagagac
tctggtgaatgtccggtggtggactttgagtgtttgggcgggcgctgcctgcccctgtcc
tggcgctgtaacggccagacagagtgtctgggtgaagggatggggctgggaacagacgag
caggaatgtgacggagagatcgagatccaggatcctgagcacgacaaagtagtggtaacc
actgccacaccagagtcctacatagagagggagggggagacaggaagagagaagagcggg
gggagggattgggaaacggcaccggttgaggtggagaaagaggagaaggaagtagaggag
gatggggactacaccaaggtaaaggagccagataatcctatggaggactactgggagttc
ctgcctcgtcaactccccagcccccagcctcacagagcccaccccagtcccggtgtgacc
caggcccctatcgagtggccgtgtggcggcctcctccaaaccttctatgggacgttcgcc
cctccttccatcaagggcccccctctgttctgtgtgtggaccctggacccccaggactcc
aggcctctgaagctggacctgcagctgctggaactggggcctggagacacggtcactatc
accaacagacagcagggcaccggggaactcatcaaaactatcaccagcgagtccagctac
aaggccattcaggttgagtcccggaccggccttctctccctgacctatcacacgcttccc
ggctcggaggggctgggcttcaacgccacctaccgtgtcgggggctactgccccccctgg
gagggtaaatgtgggggtgccgcggggggctgctacacccaggaacagaagtgtgacggg
cgctgggactgtcctgagacggggcatgatgaggcgggatgtagggggtgtcccagggac
cagtttgcttgcggaggggtggggcagcgggcggtgctggcaggtcataacttcatcggg
cgtccggtgtgcttccctgccaaggagaggtgtaactaccagctgtactgtgctgacggg
agcgacgaaaaagactgtaccatatgtcaacctgggaccttccactgcgacagcaacagg
tgtgtgtttgagagctggagttgtgacggccaggtggactgtaaggacgggacagacgag
atgaactgcaccatgaccctgcctcgaaaggtcatcaccgcggcaaccgtgggcagcctg
gtctgtgggctgctgctggtcatcgctatgggctgcacctgcaagctctactcactgcgg
acccgagaatacagtatgtttgccccaatcagccgccaggaggcggagcttatccagcag
caggcccctccctcctatggtcaattgatcgcccagggcatcatccctccagtggaggac
ttccccacggagaaccccaatgagtcttcctctctttctctgagaggttttctccagctt
ctcagacaggatacttctaactctccacgacgccgacgccgtccccgattcatccgccgg
gctgtccgtcgcatgcggagatggggcctaatccccagatccgcctccaggccctcccag
ccatccagctctgccccccagctgacagatgccccctctactggtgtggatcccagtcaa
tcaactcccgccaccacctcattggctgtggaagccgtcaatctgccattgccacagaaa
ctaggcttgctcccacagacagtgcagtaccagccaccaccacccccccacttccttcct
ccacccactctactccctccacccattgtctctactccagctacccccagagccctccag
tggctgtccccccacccccagcagcccctccctagcctctctcttccactctttggggcg
cactatctctcgcttccgctcctccccttcctcctcctcccccaccaactcactgcccct
ctccacatccccctctttctcttcctcctctttggaggacgaggtgctacttatccccct
ctctga
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