Oncorhynchus gorbuscha (pink salmon): 124008697
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Entry
124008697 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(VIII) chain-like
KO
K23455
collagen type VIII alpha
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
TrAA12
Motif
Other DBs
NCBI-GeneID:
124008697
NCBI-ProteinID:
XP_046176160
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Position
LG21:59360639..59383084
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AA seq
782 aa
AA seq
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MAKPLPSTHLLVVALQLCLVLRHHARGAAYYGHKQPQHPQQHLPQQHQPMQQIPHMPLGN
GYGNGNGNGNGNGNGYGNGDGLSKQQYGKEMPQHMPYGKEMPYVLPQYGQELPQMLPQMH
EQPQMPPNKGKGKGQSYPSNGKGLGGPPPDDRGLQGPGPEGPPGAQGPPGPQGPPGMLGQ
GMPGPHGKPGPPGPQGYPGIGXPGMPGMPGKPGGGGQPGPKGDLGPGGDVGPMGMPGGPG
LPGPPGLPGIGKPGGQGLPGQPGPRGEPGHKGIPGLPGLPGPKGDKGIGLPGLPGLKGPG
GPPGPPGQGGLPGVGKPGLNGLPGLPGGAGKPGPPGEGGLAGPPGEGGEPGPPGLPGIGK
PGQDGLPGQPGFPGGKGESGPPGLPGGPGLPGYGKPGYPGPKGDKGHGGFPGAPGPKGDK
GHGGLPGQEGLPGPNGPPGLPGSIGPPGGLGFPGPKGEGGNGGPKGLPGPKGEPGPPGLP
GQGGYPGEGGQPGPRGIPGPLGPKGDNGHKGLPGLPGAPGMPGSRGEGGMPGEKGHQGPK
GIPGNFGPGGPLGPPGLPGPKGELGPPGKPGYPGEGKPGVPGALGPQGKPGNGGPPGQPG
QPGQPGPPGPPGPPTQPPGLGEILPALGPGLDGLKQGGYKKPKNGGDRNGLEMPAFTAQL
TNPFPPVGSPVVFDKLLYNGHQDYNPQTGIFSCTIPGIYYFAYHVHCKGANVWVALVKNN
EPVMYTYDEYKKGSLDQASGSAVLPLQQGDTVHVQLPSDQAAGLYAGQYVHSSFSGYLLY
PM
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcccctcccctctactcatctattggtggtggcactccagctgtgtctagta
ctacgccaccatgcccgtggggcggcatattacgggcacaagcagccgcagcacccacag
cagcaccttccccagcagcaccagcccatgcaacagatacctcacatgcccctagggaac
gggtatgggaacgggaacgggaacgggaacgggaacgggaacgggtatgggaacggggac
gggctgtccaagcaacagtacgggaaggaaatgccacaacatatgccatacggcaaagag
atgccatatgtgctgccacagtatgggcaagaacttccacagatgcttccacagatgcac
gaacaaccccagatgccacccaataagggcaagggaaaaggtcagtcatatcccagtaat
gggaaaggccttggaggcccaccacctgatgataggggactacagggtcctggtcccgag
gggccaccaggagcccaagggcctccaggaccacagggccctccagggatgctaggtcaa
gggatgcccggcccccatggaaaaccaggccctcctggtccccaagggtatcctgggata
gganaacccggaatgccgggaatgcccggtaaacctggtggaggcggccagccaggtccg
aagggcgaccttggtcctggtggtgatgtaggaccaatggggatgcctggggggccaggt
cttccagggccaccaggcctgccaggcatcgggaagccagggggtcagggactgcctggg
cagcctgggcctcgaggggagcctggacacaagggcatacctggactgcctggtcttcct
gggcccaagggagacaaagggattggcttgccaggattgccaggtttgaaaggacctggt
ggaccacctgggcctcctggtcaagggggtttgccaggggttggaaaaccaggtctgaat
ggactaccaggattgcccgggggggcaggaaaaccaggcccacctggagaaggaggactt
gctggtccaccaggtgaaggaggagaaccaggaccacctgggctaccaggtattggcaag
cctgggcaagatggtttgccaggacaaccagggttcccaggtggtaaaggggaatcaggc
ccaccaggtttgccagggggcccaggcctacctggttacggaaagccaggatatcctgga
ccaaaaggagacaaaggacatggaggttttcctggagctccaggcccaaaaggtgacaaa
ggtcatggaggtctcccagggcaggaaggccttcctggacccaacgggccaccgggcctg
cccggttccattgggccacctgggggtcttggtttcccaggtccgaaaggagaaggtggc
aatggagggccaaaggggctgccaggtcctaaaggtgagccagggcctcctgggcttcct
ggacagggtgggtatcctggagagggtggtcaaccaggaccgagaggtataccagggcca
ctgggtccgaaaggggataacggccacaaagggttacctggcctccctggagctcctgga
atgcccggttcaaggggagaaggtggaatgcccggagaaaaaggtcaccagggacccaag
ggaatccctggaaattttggtccaggtgggccacttggtcctcccggtcttcccgggcca
aaaggcgaacttggtcctccagggaaacctggctaccctggcgaaggtaaacctggtgtt
ccaggcgctttagggccccaagggaaacccggcaacggtggaccccctggtcagcctgga
caaccaggacaacctggtccccctggcccacccggaccccccacccaaccacctggtctt
ggtgaaatcctccctgcgctgggtcctggtctggacggtcttaaacaaggcggttacaag
aaaccgaagaatggaggggacaggaacggcctggagatgccagcattcacggctcagctc
accaatcctttcccccccgtaggctcccctgttgtcttcgacaagctcctgtacaatggc
catcaggactacaatcctcaaaccggcatcttcagctgtaccataccgggaatctattac
tttgcttaccacgtccactgcaaaggagcgaatgtgtgggtggcgctggtcaagaacaat
gagcctgtgatgtacacatatgatgagtacaaaaagggcagcctggaccaggcgtcaggg
agtgctgtgctccctttacagcaaggagacactgtgcatgtacagcttccatctgaccag
gcagcaggactttatgccggtcaatatgtccactcttcattctccggatatttattgtac
ccaatgtaa
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