Oncorhynchus gorbuscha (pink salmon): 124008702
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Entry
124008702 CDS
T07892
Name
(RefSeq) neuronal PAS domain-containing protein 2-like isoform X1
KO
K09026
neuronal PAS domain-containing protein 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
124008702
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124008702
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
Motif
Other DBs
NCBI-GeneID:
124008702
NCBI-ProteinID:
XP_046176168
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Position
LG02:71410483..71489315
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AA seq
866 aa
AA seq
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MDNLSDFGSLCPSSRREWDTSSCVDDLMDEDDKDRAKRASRNKSEKKRRDQFNVLIKELC
TMLQGQGHPRKMDKSTILQRTIDFLQKQKEITAQTESCEIRQDWKPSFLSNEEFTQLMLE
ALDGFLIALTTDGNIIYVSDSVSSLIGHLPSDMVDQNILNFLHEREHGEVYKLLSSHMLM
TDPISADILDSKTHIEFCCHLARGNSHPKEPPTYEYVKFVGDLKFHNNVPTSSCNGFDLT
LPRALPSSLEEQVCLVATVRLVTPQFLKDLCNVEGPCDEFTSRHSLEWKFLFLDHRASPI
IGYLPFEVLGTSGYDYYHVDDLELIARCHKQLMQFGKGKSCYYRFLSKGQQWIWLQTHYY
ITYHQWNSKPEFIVCTHTVVSYAEVRAERRREFGLEETSPDMATSSPMKAQEVYLDICPN
LDPSGLDRMSGARSVSSHSSRKSSHTALSDTASANSSLRYTDACTPSRQSASIAGTEKNL
SRLAPSSAKLQQQQQKPQQQQQSMYQQQPPEPQLGVMHQLKEQLEERTRILQMDIKTQQQ
ELHDIKEKLQLANLQMLLQQPVHSDFGQVQQQQQQPQHQGPGRPAQQQEQAQSGVIRQAS
SHSKQPLHGAHGSSPHSLLTEHSTPSPQVQQRLIRSAGGQMQAVSLPVQTHANLTMPFYS
NPMMFSQQTTTQALQDVNQRHSDSEFSQERQLRMLLNQPVQTLVPDSRVSSQASQCNTAI
QQTKYTLEQQMMTPSFPMQHVNCNAVLVPSPVFTSSIMIPHNSFITHQAQPTYHAQQQAC
QHSLQLQQPQQFFQMQPQGLLHSGTTQAFFHTTNVPQQGTVSYIQQQPQQQQQPQQQPQQ
QQQQRQHHHSQNQPGSLSDFRNMLTQ
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctttccgactttgggtccctatgtccgtccagcaggagggaatgggacacc
agcagctgtgtggacgatttgatggacgaagatgataaagacagggcaaaaagggcatct
cggaacaaatcagaaaagaaaagaagagaccaattcaatgtgctcatcaaggagctgtgc
accatgctgcagggccaaggccatccacgcaagatggacaagtctaccatactgcagaga
actatcgacttcctgcagaaacagaaagaaatcacagcacagacagagtcatgtgagatc
cggcaggactggaagccttcgttcctcagtaatgaggagttcacccagttgatgctggag
gctttagacggtttcctcatagcactaactacagatggaaacattatatatgtgtccgac
agtgtgtcttcactcattggccatttaccgtcagatatggtggaccaaaatatcttgaac
ttcctccatgagcgtgagcatggggaggtctataagctgctatcatcccacatgctgatg
actgaccccatctctgctgacatcctggacagtaagacccacattgagttctgctgtcat
ttagccagaggaaacagccacccaaaagaaccgcctacatatgagtatgttaaatttgtc
ggagatttgaagtttcataacaatgtgcctacatcttcttgtaacgggtttgatttgaca
ttaccaagagccctgccgtcatcgttggaagagcaggtctgccttgttgccactgtacga
ttagtcactccgcaatttttaaaggatttgtgtaatgtggaaggtccctgtgatgaattc
acatccagacacagccttgaatggaagttcctgttcttagatcacagagcttcaccaatc
atcgggtacttgccctttgaggttcttgggacttctggttacgattactatcatgtggat
gacttggagcttatagcgcggtgtcataagcaattaatgcagtttgggaagggtaaatcc
tgctactatcggtttctaagcaagggtcagcagtggatctggctccagacacactactac
attacataccaccagtggaactccaagccagagttcatagtgtgcactcacacagtcgtc
agttatgcggaggtgcgagcggagaggaggagagagtttggcttggaggagacgtcccct
gacatggccacttcgtcacccatgaaggctcaggaggtgtacctggacatctgtcccaat
ctggacccctccggactggacaggatgagtggggcacgctcagtgtcctcccacagctcc
cggaagtcctcccacacggccctgtccgacacggcatcagccaactcatctttgcggtac
acagatgcttgcacaccatcacggcagtctgcatccatcgctgggacagagaagaatttg
tccagactcgcacccagtagtgcaaagttgcagcaacaacaacagaagccacagcagcag
caacagtccatgtaccagcagcagcctcctgagcctcagctaggtgtcatgcaccagctc
aaggagcagctggaggagaggacacgcatcctgcagatggacatcaagactcagcaacag
gagctgcatgacatcaaggagaagctgcagctggctaacctccagatgttgttacagcag
ccggtccacagtgactttggccaggtccaacagcagcagcaacagcctcagcatcagggt
ccagggaggccagcccagcagcaggagcaggcccagtctggggtgatcaggcaggcttcg
agccactccaaacagcctcttcatggagcccacggctcgtcccctcactctctcctcaca
gagcacagcacaccctcccctcaggtgcagcagaggttgataaggagtgcaggcgggcag
atgcaggcagtcagtctcccggtgcagacccatgccaacttgaccatgcccttctacagc
aaccccatgatgttctctcagcagacaaccacacaggcactgcaggacgtaaaccaaaga
cactcagactctgagtttagccaagagagacagctacgcatgctgctcaaccagccagtg
cagacactcgtacctgatagccgtgttagctcccaggcttcccagtgcaacacagccatc
cagcaaaccaaatacaccctggagcagcagatgatgaccccgtcgtttcccatgcagcat
gtgaactgcaacgctgtcctggtcccctctcccgtcttcacgtcctctatcatgatccct
cacaacagctttatcacgcaccaggcccagcccacctaccatgctcagcagcaggcctgc
cagcactctctgcagctgcagcagccccagcagttctttcagatgcagccccaaggactc
ttacacagtggaaccactcaggcttttttccacactactaatgtcccacagcaaggtact
gtcagttatattcaacaacaaccgcagcaacaacaacaaccgcaacaacaaccgcaacaa
cagcagcaacagcggcaacaccaccattcccaaaaccagcctggcagcctttcagacttc
cgaaatatgctcactcagtag
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