Oncorhynchus gorbuscha (pink salmon): 124008751
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Entry
124008751 CDS
T07892
Name
(RefSeq) TBC1 domain family member 8B-like isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124008751
Membrane trafficking [BR:
ogo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124008751
Endosome - Golgi transport
Rab GTPases and associated proteins
124008751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_7
AF0941-like
Motif
Other DBs
NCBI-GeneID:
124008751
NCBI-ProteinID:
XP_046176238
LinkDB
All DBs
Position
LG02:71547626..71568050
Genome browser
AA seq
1137 aa
AA seq
DB search
MWLKPEEILLKNAFKLWVTEKGNDYFVLQRRRGYGEGGGGLTGLLVGTLDTMLDSTSKVA
PFRILHQTPDSQVYWSIACGGTKEEISQHWEWLEKNIMRTLSVFDSSDDITSFVQGKIRG
LIAEEGKVSCVQEDDPEKFREALLRFEKWFDLPQKEKLVTYYSCSYWRGRVPCQGWLYLS
TNFLSFYSYLLGSEVKLVISWNEIWRLEKTSNVILTESIHVLANGEDHFFSMFLHLNETF
LIMEQLADYSIKRLFDKETFQEEPSLSDPLQITKRGLETHARNEQFRAFFRLPKEENLLE
VYESFLWVPFSHFNTLGKICLSESYLCFASQDGSQCHVIIPMREVIGVEKPDRSSRALSV
CVRGKRALRFSEVRDFERLANAIRRRCGMTASPQHSASTEVIRGECQNLINHFEDNPEEV
ALMVGQKDSSKAVSTEALMTVFHPQDTENLDPKMLKEKMKEQSWNIHFSEYGRGTSMFCT
KKTRDLIVRGIPEALRGELWMLFSGAVNDMATNPGYYTELVDQSLGTSTLATDEIERDLH
RSLPEHPAFQSDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVA
VCERMLPDYFNRRIIGALVDQAVFEELIRMHLTQLTEHMTDLTFFSSVSLSWFLTLFISV
LPIESAVNVVDCFFYDGIKAILQLGLAVLDYNMEGLISSHDDAEAVTILNKFFDNVTNKD
SPLPQTVQQNSVGNNDKASSISKVDVSDLIKEAYEKYGDMKSEEVESMRKRNKLYVIQTL
EDTTKQNVLRVVSQEVKFSASQLDELYVLFKRQHFLSCYWTMNSPVLLHHDPSLAYLDQY
QLGFHQFSLLFSLLEPWSLCSGKDTLFLWAFRLLDENQDGLVNFKEFCSALDILYSGTFT
NKLTFLFKLHQPPAFTGSPFHSKAQRLPHFIPMTDDISHLSRLTVSDLPEDGVIRKSPER
GRGKVDLQAYLKQWQDEILKKEESIKDLPRINQAQFIQFSKTLYNLFHSDPEEESLYRAV
ARVTSLLLRMEEVGRRLQEPTSPQKSSTSPILAALEGALPDWEASSTPESSSDTPSTPIT
QEAGSIPQEVEWSFAFEQILASLLNEPVLVRFFERPVDIQARLDHAKCAQLKAKTNK
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttaaacctgaagagatattgctgaaaaatgcattcaagttatgggtgacggaa
aaaggcaacgattatttcgtattacaaaggaggcgaggatatggagaaggaggaggcggt
ttgacaggtctcctggttggaactctggatacgatgctggactctacgtctaaagttgca
ccgtttcgcattctacaccagacaccggactcccaggtctactggtcaatagcgtgtggt
ggcaccaaggaggagatcagccaacactgggagtggctggagaagaacatcatgagaacc
ctgtctgtgtttgactccagcgatgacatcaccagctttgtgcagggcaagatcagaggt
ctgattgctgaggaaggaaaggtgtcatgcgtgcaggaggatgaccctgagaagttccgt
gaggctctgctaaggtttgagaaatggtttgacctccctcagaaggagaagctggtcacc
tactactcctgcagctactggaggggtcgcgtgccctgccagggctggctctacctcagc
accaacttcctgtccttctactcctacctgctgggctctgaggtgaagctggttatctcc
tggaatgagatctggaggctggagaaaacgtccaatgtcatcctgacggagagcatccat
gtgttggccaatggggaggaccacttcttctccatgttccttcatctcaatgagacgttt
ctgatcatggagcagttggctgactactccatcaaacgcctgtttgataaggagactttc
caggaagagccctccctctcagaccctctgcagatcaccaagagaggcttagaaacgcat
gctaggaacgagcagttccgggccttcttcaggctgcctaaagaggagaacctgctggag
gtgtatgagagcttcctgtgggtgcccttcagccacttcaacacgctggggaagatctgt
ctttccgagagctacctgtgtttcgccagccaggatggcagccagtgccacgtcatcatc
cccatgagagaggtgattggtgtggagaagccggaccgtagcagcagggctttgagtgtg
tgtgtgcggggtaagagggctctacggttctctgaggtccgagactttgagcgcctcgcc
aatgcaatccgcaggaggtgtgggatgacggccagtcctcagcactctgcatcaactgag
gtcatcagaggggagtgccaaaacctcatcaatcactttgaggacaacccagaggaggtg
gctttgatggttggacagaaggatagcagcaaggctgtcagcactgaggccctcatgacc
gtgttccatccccaggacaccgaaaatctggaccccaaaatgctgaaggagaagatgaag
gagcagtcatggaacatccacttctcagaatatggccgtggcaccagtatgttctgtacc
aagaagacacgagacctgattgtgcgtggcatccctgaggccttaaggggagagctctgg
atgcttttctcaggtgcagtcaacgacatggccactaacccggggtactacactgagctg
gtggatcagtctctggggaccagcaccctggccactgacgagatagagagagacctgcac
cgctccctaccagagcaccctgccttccagagcgacacaggcatctctgccctgcgcaga
gtcctcaccgcttacgcctacaggaaccccaaaatcggctattgccaggccatgaacatc
ctgacgtcagtccttttgctctatgcaaaagaggaggaggctttctggctgctggtggcc
gtctgtgagaggatgctgcctgactactttaaccgcaggatcatcggtgcactggtggac
caggcggtgtttgaggaactgatccgaatgcacctcacccagctgacggagcacatgaca
gacctgaccttcttctcctctgtgtccctgtcctggttcctcaccctgtttatcagcgtc
ctgccaatagagagcgcggtcaacgtggtcgactgcttcttctacgacggcatcaaagcc
atcctgcagctgggcctggctgtgctcgactacaacatggagggcctgatcagctcccat
gacgacgctgaggcggtcaccatcctcaacaagttttttgataatgtgaccaataaggac
agtcctcttccacaaacagtgcagcaaaactctgtagggaacaatgacaaagcatcatcc
atctccaaggtggatgtcagtgatctcatcaaagaagcctatgagaaatatggagacatg
aaatcagaggaagtagagagcatgcggaaaagaaacaaactatatgttatccaaacgtta
gaggatacaaccaagcaaaatgtgctgcgggtagtgtcacaagaagtaaagttcagtgct
tcccagcttgatgaactttatgtattgttcaagaggcaacatttcctcagctgctattgg
acaatgaacagcccagtgctgctgcaccacgaccccagcctggcctatctggatcaatac
cagctgggcttccatcagttcagcctgctcttctccctcctggagccctggtccctctgc
agcggcaaggacaccctcttcctctgggccttccgcctgctggatgagaaccaggatggc
ctcgtcaacttcaaagagttctgcagtgccttggatattttgtacagcggcactttcacc
aacaaactgacattcctgttcaagcttcatcagccaccagctttcacagggagtcctttc
cactcaaaggcccaaagactgcctcactttattccaatgactgacgacatatcccacttg
agtcgattgactgtgtctgaccttccagaagatggcgtgatcagaaaaagccctgaaaga
ggcagagggaaagttgatctgcaggcctacctgaaacaatggcaagatgagatactaaag
aaagaggagagcattaaggatttacccagaataaaccaggctcagtttatccagttttcc
aaaacactctacaacctgttccatagtgacccagaggaagagtctctgtaccgtgctgtg
gctcgagtcaccagtcttctgctgagaatggaagaagtagggcgcaggctccaggagccc
accagtccccagaagtccagcactagccccatcctggctgccctagagggggctctacct
gactgggaggcttccagcactcctgagagcagctctgacacccctagcactcccatcact
caggaggcaggctccatcccacaggaggttgagtggtcattcgcttttgagcagatcctg
gcatccctgctcaacgagcctgtccttgtgcgcttctttgagaggcctgtagacattcaa
gcccggctggaccatgccaagtgtgctcagttgaaagccaagacaaacaagtga
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