Oncorhynchus gorbuscha (pink salmon): 124008786
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Entry
124008786 CDS
T07892
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 4-like
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124008786
04990 Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
124008786
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
SALM family
124008786
Domain-containing proteins not elsewhere classified [BR:
ogo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
124008786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
LRR_5
fn3
LRR_9
Ig_2
LRRCT
LRR_14
Motif
Other DBs
NCBI-GeneID:
124008786
NCBI-ProteinID:
XP_046176289
LinkDB
All DBs
Position
LG21:6291133..6360785
Genome browser
AA seq
1013 aa
AA seq
DB search
MPDPPPHHPTRRRHPSPHTHLHPQRKTEHSILSSVHPSITPSITLQNDSERLPQSLPRSF
SSHLILCSPETPPNPTLPSHLIRCVCPPPAFPALHWLTLVTCCCLLPSLIGAGEMWDVVA
VCPFHCVCRNLSDSLSTLCADKGLLFVPPNVDRRTVELRLADNYITEVGGSDFANMTGLV
DLTLSRNTIHSIRPMAFSDLESLRSLHLDGNRLTTLGPRDLVGMVNLQHLIVNGNQLTRV
SAETFDDFLLTLEDLDISYNNLRRVPWESIQNMASLHTLNLDHNLIDHIAEGSFGELYKL
ARLDMTSNRLRTLPPDPLFARSQTGAISPTPYNSVISLNFGGNPLHCNCELLWLRRLVRE
DDMETCATPPQLAGRYFWSIPEEEFTCEPPLITRHSHKLWVLEGQRATLKCRAIGDPEPV
IHFVSPGDRIVANSSRATSYRNGTLDLLVTVARDDGAYTCIAINAAGEATATVDLKIVPL
PHRNGNVTVTGNTGNSNGNIPGSSDITTGKSGNSGEEEEEDGGTRMEEGERIVGIQGVTS
TSAQVRWDLGRSAGVYLVWMFQIQYNCTADEALVYRILPSTSNSFMLKNLVSGADYNLCV
LAIFDDIVTSLAATKVLGCAQFSTKELYPECKSLQAHFLGGTLTILVGGIIVVTLLVFTV
ALMVRHRVCSNHGDQCDHGDDGDEPACCQGGSLGSPVKGAAAGGGGGVYSQSNGNGDVMM
VVLPNGLPSKQRGGGEKEREKEKGGADVPPNLPPKPKPKAQTLPRPIVTWEGRGEKGRAQ
GERQLPPYTLEAERDSAYYAPIVSLSTLPRQSRGGTGTGRARLRPDVVVVGGAKRASFAL
DMPLGQDLLSDWRMRHGVIVGGVEDKWNSSQAYQSPGAPLSPGSVRAKRSNSLDMGSSSS
SVSIATTTTVAQRQYSSRRGYAKRLSVTWTRRSKSLHGMLVHCASATSTTSSTTSDEGSI
NGEFAVVQHGYVHAYNNTNSNSMSAVIKGNGNEKEKGGKEKTASDEGLEESVV
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgccagaccccccaccccaccaccccacccgaagacgacacccatcaccccacacacac
ctacacccacagagaaagacagaacattccatcctctcctccgtccatccctccatcact
ccttcaatcacacttcagaatgacagtgaaagacttccccaatcccttcctcgatcattc
tcctcgcatctcattctgtgttccccagaaacccctcccaaccctacccttccctcacat
ctcattcgctgtgtttgcccacctcctgcttttccggccctccattggctgacactggtc
acatgctgctgcctgttgccctctctgattggtgcaggggagatgtgggacgtggttgcg
gtgtgtccattccactgcgtctgtcggaacctgtcagactctctgagcacgctctgtgca
gataaaggcctcctattcgttccaccaaatgtcgatcggcgaactgtcgagctccgattg
gctgataactacatcacggaagtaggtgggtcggactttgccaacatgaccggattggtt
gatttgactctgtcccggaacactatccactccatccgaccaatggcgttctccgatcta
gagagtttgcggagtttgcatttggacggtaaccgcttgacgacgctggggccgagagac
cttgtgggaatggttaatctacagcacctcatcgtcaacggtaaccagctgacgagggtg
tcggcagaaacattcgatgatttcctgctgacgctggaggacctggatatctcatacaac
aacctccgaagggtcccgtgggagtcgatccagaacatggccagtctacacaccctgaac
ctggatcataatctgatagaccacatcgcagagggatcctttggagaactgtacaagctg
gctcgcctggacatgacctccaataggctgaggaccctgccacctgatcccctgtttgca
aggtctcagacgggagccatcagtcccactccctacaacagcgtcatcagcctgaacttc
ggagggaacccgctacactgtaactgtgagttactatggttacggcggctggtccgagag
gacgacatggagacgtgcgccacgccccctcagctggccggcaggtatttctggtccatc
cctgaggaggagttcacctgtgaaccgcccctcatcaccagacacagccacaagctctgg
gtcctggaaggtcaaagggcaaccctgaaatgcagagccatcggcgaccccgaacccgtc
atccattttgtctcacccggcgatcggattgtggcgaactccagccgcgcgacatcgtac
cggaacggaacattggatctcttagttacggttgctagggacgacggagcgtacacgtgc
atagcgataaacgcagcgggggaagctactgcgacggtggatctaaagatcgttccgttg
ccgcaccggaacgggaatgtgacggttaccgggaacactgggaattctaatgggaatatt
ccgggttcttcagacatcaccaccgggaaaagcgggaattccggagaggaggaggaggag
gacggagggactaggatggaggaaggagagaggattgtagggatacaaggagtcacttct
acctcagcccaggtgcgatgggacctcggccgatcggctggagtttacctggtgtggatg
tttcagatacagtacaactgcacagccgacgaggcgctggtgtacaggatcctcccgtct
accagtaacagtttcatgttgaagaacctggtttctggagcggactacaacctgtgtgtc
ctggccatctttgatgacatcgtcacctcactggccgcaaccaaggttcttggctgcgcc
cagttcagcactaaagaactctacccagaatgcaaatctctgcaggcccacttcctgggt
ggaaccctgacaatcctggtcggaggcattatagtggtaacactgctggtgttcaccgtg
gcgctgatggtgcgtcaccgtgtatgcagtaaccacggtgaccaatgtgaccacggggat
gatggtgacgagccggcatgttgccagggcgggtcattagggagtccggtgaaaggggcg
gcggccggaggtggcggaggagtgtacagccaatcgaatggcaatggggatgtgatgatg
gtggtcttgcccaatgggctgccttcgaagcagcgagggggcggggagaaggagagagaa
aaggagaaaggaggggctgatgtacctcctaatttaccccccaaaccaaaacctaaagcc
caaactctgcccaggcctatagtaacctgggagggcaggggagagaaggggagagcacag
ggtgagagacaactgcctccctacaccctcgaagcagaacgggactctgcctactatgct
cctatcgtaagcttgtccaccctcccccgccaatcacgaggaggaacaggaacggggagg
gctaggctccgcccagatgtagtagtagtgggcggggccaaacgggcaagcttcgccctg
gacatgcccctgggacaggatctcctctctgattggaggatgagacatggtgtcatagtg
ggcggggtcgaagacaaatggaattcctcccaagcctatcagagcccgggagctccccta
agcccgggctcagttcgcgccaaacgtagcaactccctcgacatgggttcttcttcttct
tctgtttccattgccacgacgacaacggttgcccagcgacagtacagcagtcgccgcggt
tacgccaagcggctgtcagtcacctggacaaggcgaagtaaatcgctgcatggaatgttg
gtacactgcgcctcggcaaccagcaccacttcctcgacgaccagcgacgagggaagcata
aacggggagtttgccgtagttcaacatggttacgtccacgcctacaacaacactaactct
aactctatgagcgctgttatcaagggcaatgggaacgagaaagagaaaggagggaaagag
aagacagccagtgatgaagggctggaggagagtgtggtgtag
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