Oncorhynchus gorbuscha (pink salmon): 124008894
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Entry
124008894 CDS
T07892
Name
(RefSeq) rho guanine nucleotide exchange factor 11-like
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
124008894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124008894
Membrane trafficking [BR:
ogo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124008894
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
RGS
PDZ_2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
124008894
NCBI-ProteinID:
XP_046176447
LinkDB
All DBs
Position
LG21:complement(15992337..16027953)
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AA seq
1614 aa
AA seq
DB search
MSLRTPTSTLDRLSSLTIGDSERNTSSGQQREPPADIPPENTGPGLVQRCVVVQKDQLGF
GFTVCGERIKLVQNVRPGGAAVKAGVHEGDRIIKVNGSLVSSMSHQEVVKLIKSGPYVAL
TLQGPPPSAAALVLQPLPADLLPNQRTSLGGEAPPPPPPPLPPGLTSTPSQRINKPLQNL
DVQKHATQILRNMLEQGEAELQDLMEELSRNPSPSLEERIDSAKRRTQQVRVKIKQDLDG
TRPEAVSNYVIAGDARLSVDSSEGDFETCESPHSSPSFFRTPLRWRQGSGTHTFSDSAGK
TQIIGPEEEEEEDDSYALNEMDGPFQDIELLKSRPAHMTVFMRYVFSQLLDPNPLLFYLS
VEAYLGSSPKDARVLAPQICSHFLDPDAPLKIRVREEYLADIESRLHAQEDIRGPLSELQ
QQVLPDIQDQIQDYRNKQMMGLGSLFGEGDLQHLDGDPAKEKQVVDRQVTALWEILSKHE
DDRSSPLASAVLLYLRHSGIKLRDSRVFPGLSTEKEKWLSFFPKTKKPSSAKKEKDGEDR
KRNPILKYIGKPRSTSQSTFHVPLSPTEVRPGSVRNIIQQFENDPEIPGEEGDEGDLQRL
SSSSLGEDSMDSPMVSVRLARSESLKAQGEGRRRGGSSGVETVPRSRSDVDMEDCGEEIE
GPGLRPLHHSASSSATSSSARSLENPTPPYTPRSSRRQFEESPVALLPDAPALEDDVVDS
HNWQETVAPQVLATLCPREVDRQAVIYELLTTEASHLRTLRVLDQVFFQKMRCVLSSDEL
ACIFPNLPQVYQLHVSLCEAMKKKRESPIVQGIGDIMLARFEGVAGEEFQEQASHLCSQQ
SQALELIKNKQRKDPRFTHIIQECEASPHCRRLQLKDLLVSETQRLTKYPLLLDNIIKHT
EPGSTDLPPLQRVFTTSSKVFSIFLLFNVSIDHLFKVSIYHLFNVSIYHLFNVSIDHLFK
VSIDHLFNVSIDHLFNVSIDHLFNVSIDHLFNVSIYHLFNVSIDHLFKVSIDHLFNVSID
HLFNVSIDHLFNVSIYHLFNVSIYHLFNVSIYHLFNVSIYHLFKVSIDHLFNVSIDHLFK
VSIDHLFKVSIDHLFNVSIDHLFNVSIDHLFKSLDLTSKTMIHEGPLTWKVNKDKTLEIQ
ALLLSDLLVLLQRGPDDRLLLRCPSRWLGGGGGGSGDTKASFSPVVQLDSLLVRSVATDN
KALYVISTTERKIYELVAGTSSEKNIWKDQLEKTISLVAGSSPSTNNRSTPIFSPSLGNA
SPVSTGSHVYQSDDSMTEQVVFMETDSPNDEDNELTRTTPTDQSGAFFCGDGQDYVKRRI
GVAEAALEDVETLRQLIFRDLEDGWSHGSDGTPTNEAANERSPFNDHQRPLSSETLLGVS
PSQWEAEHAEAPPSEVECPSVLVVRKAVVVGSPSIPDDITEDATLHSDQSPEPRGEASVR
GNVFYLAMPTEQGEGLLDESHTDEVNDPPTPTTTELPDLEQEVISSPVQTHEKEGQVASI
MSADNQSERGNLSRQEGQSQSQKSLQSHIIKNVDDIFHTIEELMRKLHQLRDIETAHHQL
LKTLREPPVNPESGDLFHIQATVVRTPFLNRDPGDGKEASPAEPAKLKILSTGF
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccgcacccccacctcaacactggacaggctaagcagcctgacgataggagac
tcggagcgcaacacctccagcggccagcagagggagcctccagctgacatcccccctgag
aacacaggtccaggtctggttcagagatgtgtggtggtacagaaagaccagctggggttt
ggcttcaccgtgtgtggcgagaggatcaagctggtgcagaatgtccgaccaggtggtgca
gcagtcaaggcaggggtccacgagggagacagaatcataaaggtgaacggctcgctggtg
tcgtccatgtctcaccaggaggtggtgaagctcatcaagtctgggccgtatgttgccctg
acacttcaaggaccgcccccttcagcagccgccctcgtcctacaacccctccccgctgac
ctcttacccaatcagaggacgtcactgggaggtgaagccccgccaccaccacctccaccc
ctgccccccggacttaccagcaccccctcccaaagaatcaacaaaccactacagaaccta
gatgtacagaaacacgccactcagatcctcaggaacatgttggaacagggagaggctgag
ctccaggacttgatggaggagctgtcacggaacccctccccatcactggaggagcgaatc
gatagtgccaagaggcgcacccaacaagtgcgggttaaaatcaagcaagatctggatgga
actcgccccgaagctgtgtccaactatgtaatagcaggagatgctcggctgtcggtggac
tcaagtgaaggagactttgagacctgtgagagcccccactcctccccctccttcttcagg
acccccctacgctggagacagggctccggcacacacaccttctctgactcggctgggaag
actcagatcattggccccgaggaagaggaggaagaggacgacagctatgcactcaatgag
atggacggtccatttcaggacatagagcttctcaagtcgagaccggcccatatgacagtg
ttcatgagatatgtcttcagccagctactggatcccaacccactgctgttctacctgtcg
gtggaggcctacctgggctccagccctaaagacgcccgtgtcctcgcgcctcagatctgc
tcccacttcctggaccctgacgctccgttaaaaatcagagtacgagaagagtacctggct
gatatcgagagtcgtctccatgcccaggaggacatcaggggaccactgtctgagctccaa
cagcaggtgctgcctgacattcaggaccaaatacaggactacaggaacaagcagatgatg
ggtttgggctctctgtttggagagggagacctacagcacctggatggagacccagccaag
gagaaacaggtggtggacagacaggtcactgctctctgggagatactctcgaagcacgaa
gacgacagaagttctcctctagcctctgcggtgctgttgtacctccgtcactcgggcatt
aagctgagggactccagggtgtttccaggactcagcactgagaaggagaagtggctatcc
tttttccccaagaccaagaagccgagcagtgcaaagaaagagaaggatggagaggacagg
aagagaaaccccatcctgaagtatatcggcaagcccaggagcacctcccagtccacgttc
catgtccccttgtctcccactgaagtgcgtcctggcagtgtgaggaacatcatccagcag
tttgagaacgacccagagatccccggggaggagggggacgagggagacctccagagactg
tcctccagcagcctgggagaggacagcatggacagccctatggtgtcggtgcgtctggct
cgtagtgagtctctgaaggcgcagggggaggggcgtcggcggggcgggtcttcaggagtg
gagacagtccctcgttcccgtagcgacgtggacatggaggactgtggggaggagatagag
gggccgggcctgagacccctacaccacagcgcctcctcctcagccaccagtagctcagca
cgatccttggagaaccccacgcctccatacacccctcggtcgtctagacgacagtttgag
gagtccccggtggccctgctccctgatgccccagccctagaggacgacgtggtggacagt
cacaactggcaagagacagtggcccctcaggtcctggctacactctgtccccgagaggtg
gaccgacaggccgtcatttacgagttgttgacgacagaggcgtctcacctgcgtactctc
agggtgttggatcaggtgttcttccagaagatgaggtgtgttctgagctctgacgagctg
gcctgcatcttccccaacctgcctcaggtctaccaactacatgtgagcctgtgtgaagcc
atgaagaagaaaagggaatctcccatcgttcagggcatcggtgacatcatgctggccagg
tttgagggcgtggcgggggaggagtttcaggagcaggcgtcccacctgtgcagccagcag
tctcaggctctggaactcattaagaacaagcagcgcaaagacccccgcttcacacatatc
atccaggagtgtgaggccagtcctcactgtaggaggctgcagctgaaggacctgctggtg
tctgagacacagagactcaccaagtatcctctgttactggacaacatcatcaaacacaca
gagcctggctccacagacctcccgcctctccaacgtgtatttaccacctcttcaaaagtt
tttagtattttcctcctcttcaacgttagtattgaccacctcttcaaagttagtatttac
cacctcttcaacgttagtatttaccacctcttcaacgttagtattgaccacctcttcaaa
gttagtattgaccacctcttcaacgttagtattgaccacctcttcaacgttagtattgac
cacctcttcaacgttagtattgaccacctcttcaacgttagtatttaccacctcttcaac
gttagtattgaccacctcttcaaagttagtattgaccacctcttcaacgttagtattgac
cacctcttcaacgttagtattgaccacctcttcaacgttagtatttaccacctcttcaac
gttagtatttaccacctcttcaacgttagtatttaccacctcttcaacgttagtatttac
cacctcttcaaagttagtattgaccacctcttcaacgttagtattgaccacctcttcaaa
gttagtattgaccacctcttcaaagttagtattgaccacctcttcaacgttagtattgac
cacctcttcaacgttagtattgaccacctcttcaaaagtctggacctgaccagtaagaca
atgatccatgagggtcctctcacctggaaagtcaataaagacaaaactttagagatccag
gccctgctgctatcagacctgctggttctgctccagagaggtccagacgaccggctgcta
ctgcgctgcccgtcccgctggctggggggaggaggaggtggtagcggggacaccaaggcc
tccttcagccccgtggtccagctagactccctcctggtgcgctctgtggccacagacaac
aaggccctgtacgtcatcagcaccacagagagaaagatctatgaactggtagcggggacg
tcctcagagaaaaacatctggaaggaccaacttgaaaagaccatctcattggttgctggc
tcctcaccttcgaccaataacagatccacacctattttctccccaagtcttggcaacgct
tcccctgtctcaactggcagccatgtctatcaatcagacgactcgatgacggagcaggtt
gttttcatggagacggactcccctaacgatgaggataacgagctcacacgcaccacacca
acggaccaatcaggagctttcttctgcggggatgggcaggactacgtcaagcgacgaatt
ggagtagcagaggcagctcttgaagacgtggagacgctaaggcagctgattttccgtgac
ctggaagatgggtggagtcacggctcagatggcacgcccacaaacgaggcagccaatgag
aggagcccgttcaatgaccaccagaggccactgtcctctgagactctccttggcgtcagt
cccagccaatgggaggctgagcacgcagaagccccgccctcggaggtggagtgccccagt
gtgcttgtcgtgaggaaagcagtggttgtgggctccccttctatccctgatgacatcact
gaagatgccaccctccactctgaccaatcacctgagccgagaggcgaggccagtgtacgg
ggaaacgtgttctatctggcgatgcctacggagcagggagagggactgctggacgagagt
cacacagatgaggtcaacgacccccccaccccgaccaccactgaacttcctgatctggaa
caggaagtgatttcatcgcccgtacagactcatgagaaagaagggcaggtcgcttccatc
atgtctgcggacaatcaatcggagaggggaaatctgagtcggcaggaagggcagagtcaa
tcacaaaagagcctccagagccatataatcaaaaacgtggatgacattttccacaccatc
gaggagttgatgagaaagctgcaccagctgagggacatagagacagctcatcaccagctc
ctgaaaacactgagagagccacctgtcaatccagagtctggtgacctctttcatatccag
gcaaccgtcgtcaggacaccgtttctgaaccgggacccaggagacggaaaggaggcgagc
ccagcagagccagccaagctgaagatcctgtccactggattctaa
DBGET
integrated database retrieval system
