Oncorhynchus gorbuscha (pink salmon): 124008907
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Entry
124008907 CDS
T07892
Name
(RefSeq) VPS10 domain-containing receptor SorCS2-like isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124008907
Membrane trafficking [BR:
ogo04131
]
Protein recycling
Others
Others
124008907
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
DUF6786
InlK_D3
BiPBP_C
DUF2769
Motif
Other DBs
NCBI-GeneID:
124008907
NCBI-ProteinID:
XP_046176456
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All DBs
Position
LG21:complement(30647701..30990521)
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AA seq
1171 aa
AA seq
DB search
MSAIGLMARSMASLRPKGIVSAHLCLAVVIAWMSLMRPMLCDSGVLHRSDGDRLFDSRGA
VGIDGVDGVFGPGLGDNDGDAGDVESPRFRRALSQEKVSLLSSSFVLKGDATHNQAMVHW
TGENSSVILILTKYYHGDSSKVLESSLWRSSDYGTTYSKLNLMPGTTIVVSNFYICPINK
KKVILVSSSINERDQMLFISTDEGSSFQRQPLSFTAETLLFHPKEEDKVLAYCKEGKLYV
STDLGRKWTLMQERVTKDRIYWSVAGVDVDPDLVHMEMQDTSGGYLYVTCLIQNCSDKMV
TAQFLGKIDHNSLSVQDDYVFVKVTTGNRTKHYVSYRRNEFVQMRFPKYALPKDVHIVST
DESQVFLALQEWYQTDTYNLYQSDPQGVYYSVVLENVRSAKQPEESALIDILEVRGVKGV
FLANQKVDGKVTTLITYNKGRDWEPLAPPTIDMNGKPVTCQSPDCHLHLHLRWADNPYVS
GTVHTKDSAPGLIMGAGNLGSQLVEYKEEMYITSDCGKTWRQVFEEEHHILYLDHGGVIV
AIKDTSIPLKILKFSIDEGRTWIIHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDW
ELVKVDFRQSFPRQCTEADYDSWKLTDLKGEKCIMGQERSFRKRKDTAFCIKGKSYTSAL
TTKTCQCSEKDFNCDYGFERAQSLKTEGDRCFADFWHDPDSPPDDCHLGHDFESSTGYRK
VVSNMCEGGVNKQQSAKQHTCPLLPPRGLQLGIKGQILAVAPGDDITFIVHQEQGDTSNT
KYQVDLGDGVRAIYQNLTVTDEPIQHRYEQLGVYRVTVKAENMAGHDQATMYIQVTAPLQ
EVHLEVVPIAGVNQEVNLTAVVLPSEANLTVFYWWIGDNLQPKLSLENSLITQFPAEGEV
SVTVQASNGRSMVQDTKTVRIYDLFQVIPLAFSSNLDLLNPNIPEWREDVGQVVTRILAK
ITGVPQESLVTMVKPGLPTTAELYILPPESKPAKRSVFVDKRIPAIKQAFNENNVSFFVR
GGLQVLVTLADPNAGLIANDSSPRATEIGSQGGVAGPGVWALAVIFLISVIATGSFILYK
FKSPWLRTEDAYPPLFFRKLPGRNVYAQMHNEKEQEMTSPVNHSEDTQHIIQGEEFIDDD
LDSQTLGNAGGNHSGVVLSINSRELHSYLTS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctataggcctaatggcgcgaagcatggcatctctgcgtccgaaaggaatcgtt
tcagcgcacctgtgcttggccgtggttatcgcctggatgtcattgatgagacccatgcta
tgtgacagcggcgttttacatcggagcgacggggatcgtctgtttgacagccgcggcgct
gtaggcatagacggggttgacggagtgttcggaccgggcttgggtgataatgatggggac
gcgggcgacgtggaatccccgcgcttcaggagagcactatcccaagagaaagtgtccctg
ctcagcagctcgttcgtgctcaaaggggatgctactcacaaccaggcgatggtgcactgg
actggagagaacagcagcgtcatcctcatcctgaccaagtactaccacggtgactccagc
aaggttctggagagctccctctggaggtctagtgactatggcaccacctacagcaagcta
aacctgatgcctgggacaactatcgtggtctctaacttctatatctgccccatcaacaag
aaaaaggtgatcctagtgagctcctccattaacgagcgtgaccagatgctgttcattagt
acagacgagggctcctcgttccagcgacagcccctctccttcaccgcggagaccctcctc
ttccaccccaaggaggaggacaaggtgctggcttactgcaaggagggaaagctctatgtg
tccacggatttgggccggaagtggactctaatgcaggaacgagtgaccaaggacaggata
tattggtctgtggctggtgtagatgtggaccctgacttggtgcatatggagatgcaggac
acaagtggagggtacctgtacgtgacctgtctgatccagaactgctcagacaagatggtg
acggctcagttcctggggaagatcgaccacaactctctctcagtccaagacgactacgtc
tttgtcaaggtgaccacaggaaaccgcaccaagcactacgtttcataccgacggaatgag
tttgtccagatgaggttccctaaatacgccctaccaaaggacgtccacatagtgagtacg
gacgagagccaggtgttcctggccctgcaggagtggtaccagacagacacctacaacctg
taccagtcggacccgcagggcgtctactactccgtcgtgctggagaacgtccgcagcgcc
aagcagccggaagagagcgcccttatagacatactggaggtccgcggggtcaaaggcgtc
ttcttggccaatcagaaggtggatggcaaagtgacgactctcatcacctataacaaaggc
cgagactgggaaccccttgccccgcctaccattgacatgaacggcaagccagtcacctgc
caatcacctgactgtcacctccacctccacctgcgctgggctgacaacccttacgtatca
gggaccgtccacaccaaagactccgcccccggactcatcatgggtgcaggtaacctggga
tcccagctggtggagtataaagaagagatgtacatcacctctgactgtgggaaaacttgg
agacaggtgtttgaggaagagcatcacatcctgtacctggaccatggaggggtcattgtt
gccatcaaagacacctccatccccctcaaaatactcaagttcagtatcgatgagggaagg
acgtggatcatccacaacttcaccagcacctcggttttcgtcgatggacttctgagcgaa
ccgggagatgagaccctggtcatgacggtgtttggtcacatcagttaccggtcagactgg
gagcttgtcaaggtggacttcagacagtcatttcccagacagtgtactgaggccgactac
gactcctggaaactcactgacctgaagggagagaagtgcattatgggtcaggagaggagt
tttaggaagaggaaggacaccgcattctgcatcaaggggaagagctacacctccgccctc
actaccaagacctgccagtgctccgagaaagacttcaactgtgactacgggtttgagcgt
gcccagagcctgaagaccgagggagatagatgctttgctgacttctggcacgacccagac
tcgccacctgacgactgccatctgggacatgacttcgagtccagcacagggtacaggaag
gttgtgtccaacatgtgtgaggggggagtaaacaagcagcagagcgccaagcagcacacc
tgtcctctgctgcctcccagaggcctccagctgggtataaaggggcagatactggctgtg
gcgcctggtgatgacatcaccttcatcgtccaccaggaacagggtgacaccagcaacact
aaataccaggtggacctgggtgacggggtgagggccatctaccagaacctgacagtgaca
gacgagcccatccagcaccgctacgaacagctgggggtgtaccgtgtcactgtcaaggcc
gagaacatggccggacacgaccaggccaccatgtacatccaggtcacagcccctctacag
gaagttcacctggaagtagttcccattgctggggttaaccaggaagtcaacctgacagct
gtggtgcttccttcagaggccaacctgactgtcttctactggtggataggagacaaccta
cagcccaaactgtccctggagaatagtctgataacgcagttccctgcggaaggagaggtg
tctgtcactgtccaggcctctaatggacgctccatggtgcaggacaccaagacagtccgc
atctacgaccttttccaggtcatccctctggccttcagcagtaacctggacctcctcaac
cccaacattccagagtggagggaggacgtgggtcaggtggtcaccaggattctggccaag
atcacaggtgtcccccaggagtccctggtaaccatggtgaagccgggcctgcccaccaca
gccgagctgtacattctcccaccagagagcaagcctgctaagaggagtgtatttgtggat
aagcgtatccctgccattaagcaggcctttaatgagaacaacgttagcttcttcgtacga
ggaggtctacaggtgttggtgaccttagctgatcctaacgcaggactaatagctaatgac
tcgtccccgagagcgacggagattggttctcagggtggagtggcaggtccaggtgtctgg
gctctggctgtcatcttcctcatcagcgtcatcgctactggatccttcatcctctacaag
ttcaagagtccttggcttaggactgaggatgcctatcctccactatttttcagaaagctg
cctggccgaaatgtgtatgcccagatgcacaacgagaaggagcaggagatgaccagccct
gtcaatcacagcgaggacacgcagcacatcatccagggggaggagtttatcgacgacgat
ctggactcgcagactctaggtaacgcaggaggtaaccactcgggtgtggtgctgagcatc
aactccagagagctgcacagctacctgaccagctga
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