KEGG   Oncorhynchus gorbuscha (pink salmon): 124009060
Entry
124009060         CDS       T07892                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 3-like isoform X1
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ogo04121]
    124009060
Ubiquitin system [BR:ogo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     124009060
SSDB
Motif
Pfam: WD40 WD40_Prp19 Bromodomain WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_VPS8 Beta-prop_Nup120_160 Auxin_resp
Other DBs
NCBI-GeneID: 124009060
NCBI-ProteinID: XP_046176531
LinkDB
Position
LG02:73172036..73198543
AA seq 1769 aa
MAEEQCSEIEAELYYLIARFLQSGPCKKSAQILVEELEEYELIPKRWSWDGKQYKRNFQD
WVILNQHIPADYLLRVCQQIGPLIDKEAPPSVPGVQTLLGLGRQSLLRTAKSCSHTEWSG
TAVAALHRGRPPEPPVSFGKPPSIVSIMGARQATGTARFGHALPSYTYQHVKMHRRILGH
LSSVYCVAFDRSGRRIFTGSDDCLVKIWSTDDGRLLSTLRGHAAEISDMAVNYDNTLIAS
ASCDKVIRVWCLRTCAPITVLQGHAASITSIQFCPAVKGPMRYLASTGADGMVCFWQWHS
LSMKFVDRPVKFIERSRPGVQISTSSFSCGGMFLATGSTDHVIRVYYLGSETPMKLSELD
SHMDKVVVVQFCNNSYSLRFVSGSRDGTVRIWHYQQQEWKSITLDIATRLPGTAVVNGED
KTKLVPTMVAWDRGDRTVVTAVSNYLLKVWSSTTGQLLHVLSGHDDEVFVLEAHPFDHRI
MLSAGHDGNIYMWDLSKGSKIRNFFNMIEGQGHGAVFDCKFSADGQHFACTDSHGHLLIF
GFGCSRPYEKIPDQMFFHTDFRPLIRDANNFVLDEQTQQAPHLMPPPFLVDVDGNPHPTH
YQRLVPGRESCKDEHLVPQLGYMANGDGEVVEQVIGQQTAEDGHGESPLDVLIRELQNQP
DESRDQDGVPEGEGAVEGAEVVGSPPNVGLRRSGQVEGVRQMHHNAPRSQMATERDLLAW
SRRVVVNEVQQGVLRVMEETRRAKGEVECSLYNTERRRKPVLGAPKTEEQAPCKRSLRRT
QRKKKKQTRPAPAYQTRSSRDRRPVDRRRNSDSQMDSDSDGEAEEQAEASDASSDGEAQW
QSDSSSSVSSSDYSDWTADAGINLQPPKRTSRRQVRPPGGSSSSEEAEGQGEEARRKQAE
EKKKPKQTKQKKPSSSLSLAGCDAEEWLPPSWIMETIPRRSPFVPQMGDELMYFRQGHQA
YVRAVRRAKAYSINPQKQSWNKLNLRDQESVKVVGIKYEVGPPTLCCLKLAFLHPISGKM
TNESFSLKYHDMPDVIDFLVLQQFYDEAKEHNWQTGMRFRSIIDDAWWFGSVEDQQPLQP
EYPDSLFQCYTVKWDNSEREKMSPWDMEPIPDEAELPEDVGDGVVVTEEEVKARLYSPQE
GEWGAHTRDEDCQRVIFGIDELLTLDLAKAFASPVDLRDYPLYCTVVAYPTDLSTIRRRL
ENRFYRRISALMWEVRYIEHNARTFNEPQSPIVTAAKVVTDVLLRYIGDQSCTDILDLYH
KVKTELSSGEDEVKHEDTAEVDMDSDTPGTSTGQQRANPSPKKRGVVLDVRAWRGQCREL
LRRMMDGPDSEPFRQPVDLFTYQDYRDIIDTPMDLGTVTETLIIGNYENPMEFAKDVRLI
FSNSKAYTPNKKSQIYTMTLSLSAFFERQIISIISDYKSAVQNQRRKSRQSVSYRKRLHS
GGSSPPTSRPSSPKGKHKSRKKPTPKELQTPSKKRPRRPSQETSSVMVDEDSQPSSSSNS
GTGSHSGGPGADRVTRSQTTPVKNSEGNRPLTNGTRQSHRRRVLQEEEGEGSGGSNSSSS
SSSSSSSSSSSSSDSESDSESEVGKFVDGGDHDYSKAPRLKTGHKVKGKMAVSGKRMLEE
EEAPERAKRARVQAEEQEEEDEDEQGEDEEEEEGEQPQPPQQEEGGEPEDEEEEPEDEEE
PEEMEESEEEEESEQGEGGAEGGQKSSSRSKSGQVNTRNQGRRTVLYNDESDDESGTTED
PLNLGMSRSGRLRRMTEKARVSHLMGWNH
NT seq 5310 nt   +upstreamnt  +downstreamnt
atggcagaagaacagtgttcagaaatcgaagctgaattgtattacctcattgctagattt
ctccagtcgggaccgtgtaaaaaatcggcacagatactggttgaggaactagaagagtat
gagttgatcccgaaacgatggagttgggacggcaaacaatacaaacgaaacttccaagac
tgggtgatcttgaaccagcacatccctgcagactacctgctgagagtatgccagcagata
ggtcctctcatagacaaggaggccccacctagtgtccctggggtccaaaccctcctgggt
ttgggaagacagtctttgcttcgcacagctaaaagttgtagccacacagaatggagtgga
actgctgttgctgcgctccaccggggtcgacccccagaacccccagtcagctttgggaag
ccccccagcatcgtgtccatcatgggtgctcgccaggctactggcactgcccgcttcggc
catgctctgccatcctacacctatcagcatgtgaagatgcacaggcgcatcctgggccac
ctatcctctgtatactgtgtggctttcgaccgcagtggcagacggatatttacaggttct
gatgactgtctggtaaagatatggtccacagatgatggccggctgctgtccaccctgcgt
ggccatgcggccgagatctccgacatggcggtgaactacgacaacacgctaatcgcctca
gccagctgtgacaaggtcatcagagtgtggtgcctgcgcacctgcgcccccatcactgtg
ctgcagggccatgcagcctccatcacctccatacagttttgtccggcggttaaaggacca
atgcggtacctggcctccaccggagcagacggcatggtgtgtttctggcaatggcactcg
ctcagcatgaagtttgttgaccggccagtcaagttcattgagcggtcaaggcctggggtc
cagatctccacctcctccttcagctgtggtgggatgttcctggccacaggcagcacagat
catgtaatcagggtgtattaccttggctctgaaacacccatgaagctctctgagttggac
tctcacatggacaaagttgtggtggtccagttttgtaacaacagttacagcctgaggttt
gtgagtggtagtcgtgacggcacagtcaggatatggcattaccagcagcaggaatggaag
agcattactctggacatagccactagactgccagggactgctgttgtgaatggcgaggac
aagaccaagctggtgccgacaatggtggcctgggaccgtggtgaccgcacggttgtcaca
gcggtctctaactacctgctcaaagtgtggagctccaccacgggccagcttctgcatgtg
ctatctggtcatgatgatgaggtgtttgtcctggaggcccacccctttgaccaccgcatc
atgctctctgctggccacgacggcaacatctacatgtgggacctgtccaagggatccaag
atccgcaacttcttcaacatgattgagggccaaggtcacggagctgtatttgactgtaag
ttctcagctgatggacaacattttgcctgcactgactcccatggccacctgctcatcttt
ggctttggctgcagcagaccctatgagaagattcctgaccaaatgttcttccacactgac
ttcaggccgctaatccgagacgccaataactttgtcctggacgagcagacccagcaggcg
ccccaccttatgccccctcccttccttgtggatgtggatggtaacccccaccccacccac
taccagcgcctggtacccggcagggagagctgcaaggatgagcatctggtgccccagctt
ggctacatggcgaatggtgatggtgaggtggttgagcaggtgatcggccagcaaacagca
gaggatggtcacggagaaagccctttggatgtcctgatcagagagttgcagaaccaacca
gatgagagtcgggaccaagatggagtgcctgaaggagagggtgctgttgagggagcagag
gtagtgggatcgcccccaaacgtgggcctgaggaggagtggtcaggtggagggggtgcgt
caaatgcaccacaacgcccctcgcagtcagatggccacggagagggacctgctggcctgg
agcaggagggtggttgtcaacgaagtccagcaaggggtcctccgggtgatggaggagacc
aggcgggccaaaggtgaggtggagtgttccctctacaacacagagaggaggaggaaacct
gtactcggtgctcctaagactgaggagcaggctccatgcaagcgctccctgcggcgaacc
cagaggaagaagaagaagcagaccagacctgcaccagcgtaccagacccgctcatcacga
gatcgccgccctgtggataggcggaggaactctgacagccagatggactcagacagcgat
ggagaggcagaggagcaggcagaggccagcgatgcttcctctgatggggaagcacagtgg
cagagtgacagcagttccagtgtctcctccagtgactactctgattggacagctgatgcg
gggatcaacctccagccccccaagcgtaccagcagaaggcaggtgcggccgcccggtggc
tccagcagctcggaggaggcggagggccagggagaggaggccaggaggaagcaggcggag
gagaagaagaagcccaagcagaccaaacagaagaaacccagttcgtctctgtctctggct
ggctgtgacgcggaggaatggcttcccccgtcctggatcatggagaccatcccccgacgc
tcgccttttgtgccacagatgggtgatgagctgatgtacttcaggcagggccaccaggcc
tatgtcagggcggtgcgcagggccaaggcctacagcatcaaccctcagaaacagtcctgg
aacaagctcaacctcagggaccaggagtctgtgaaggtagttggtatcaagtatgaagtg
ggcccccccaccctctgttgtctaaaactggccttcctgcaccccatctcaggcaaaatg
accaatgagtcattctccctaaagtaccatgacatgccggatgtcatcgatttcctggtg
cttcagcagttctatgatgaagctaaagagcacaactggcagacaggtatgcgcttccgg
agcatcatcgatgacgcctggtggtttggctcagtggaggaccaacagccactccagcca
gagtacccagacagcctgtttcagtgctacactgtcaagtgggataatagcgagagggag
aagatgagcccttgggacatggagcccattcctgatgaagcggagttgccagaggatgtt
ggtgacggggtggttgtgactgaggaggaggtgaaggctcgcctctacagcccccaggag
ggggagtggggggctcacacacgggacgaggactgccagagggtcatctttggcatcgac
gagctgctcacactggacctggccaaggcatttgcgtcaccagtggacctgcgggactac
cctctctactgcactgtggtggcctaccccactgacctcagcaccatccgcagacggctg
gagaaccgcttctacaggaggatctctgctctgatgtgggaggtgcgctacattgagcac
aacgcccgcactttcaacgagccccagagccccatcgtgacagcagccaaggtggtgact
gatgtgctcctccgctacatcggggaccagagctgcacagacatcttagatctgtaccac
aaggtgaagactgagctgagcagtggagaggatgaggtgaaacatgaagatactgctgag
gtggacatggactctgacactccagggacctccacaggtcaacagcgggccaatcccagt
cctaagaagcgtggggtggtgttagatgtgcgtgcttggcggggccagtgtcgggaactg
ctgcggcgtatgatggacggccctgactctgagcccttcagacagcctgtggacctcttc
acctaccaagactatcgagacatcatagacactcccatggacctggggactgtaacagag
actctgatcatcgggaactacgagaaccccatggagtttgccaaagatgtccgcctaatt
ttcagcaactccaaggcctacacgcccaacaagaagtcacagatctacaccatgaccctg
agcctatcagccttctttgaaagacaaatcatctccatcatctcggattacaagtctgcg
gtccagaaccagcggaggaaaagtcgccagagtgtcagctacaggaagagactgcacagc
ggaggcagctccccacccaccagccgaccctccagtcctaaagggaagcacaagtcaagg
aagaaaccaacaccaaaagaattacagaccccctccaagaagcggcctcgcaggccatct
caagagacgagcagtgtgatggtggatgaggacagccaaccctcatcatcgtctaactcc
gggacaggaagccacagtgggggtccaggggccgaccgtgtcacccgcagccaaaccact
cctgtcaagaactcagagggtaacagacctctcactaacggcaccagacagagccacagg
agacgagtgctgcaggaggaagagggagagggatctggaggatccaatagctcatcttcg
tcatcgtcttcctcgtcttcctcatcatcctcctcatcagacagtgagtcggacagtgag
tctgaggttggaaagtttgtggacgggggagatcacgactacagcaaagctccccgctta
aaaacgggccacaaagtcaagggcaagatggccgtttctgggaagaggatgctggaagaa
gaggaggctccagaaagagccaagagagcacgagtccaggcagaggagcaggaagaggag
gatgaagacgaacaaggtgaagatgaagaggaggaagagggggagcagccacagccaccg
cagcaagaggaagggggggagcctgaggacgaagaggaggagcctgaggacgaagaggag
cctgaggaaatggaggaatcagaagaggaggaggaatcagagcagggtgagggtggggca
gagggcggtcagaaaagcagcagccgcagtaagtctggtcaggtgaacactcggaaccag
ggccgcaggacagtgttgtacaacgacgagtcagatgacgagtcagggaccacagaggac
ccactcaacctaggcatgtcccgctcaggacggctacgccgcatgaccgaaaaggcccgg
gtcagccaccttatgggctggaaccactga

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