Oncorhynchus gorbuscha (pink salmon): 124009083
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Entry
124009083 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 7-like
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124009083
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124009083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
124009083
NCBI-ProteinID:
XP_046176540
LinkDB
All DBs
Position
LG22:complement(14062164..14141730)
Genome browser
AA seq
3162 aa
AA seq
DB search
MADPGMLSLFGDDANLFSDGLEGLGDCGFPQGQPNPMGQQMPHEHQGYGSLSSNSLHHPS
QAVPGQPKMGHPYDPFAGYEQQQGRMLGNGPAVNGMASPHSRYHNNPQQPGGGHHVYSGA
QGDGRGQPFPDGGAVWGPQAGPGQGLPPFQQQQAATQAPSHQQHGPSGPHGHQMGPYMGR
ADYATMQGHSGQTQTPPRINHFPQGMGQEPSHYMGHVGLQQNPSMTGPPMRHPAQQQQPP
QQHPQPPTQQFLHRPSQEPMASHTPRFPHSPSRQQQVLAGRPHQNMGFNMHGQAAPPGAV
TSSGQYPPYSQYGNLNQGLAGSAGMSPVMSLSSTSNNSNAMGPAQVQRYPNVGGPPQRYT
GPQVHQQPVHPNQITGQPMHPSQPMHPSQAQATPQQQPHLPTPPQGSYGSPPSMSPMRGM
GTPGGTPPPQQGRPPSAGLAPEVGGYPGVPLQPPNPMAPLRETPLPWVLSSHTPTCNTTL
STLPTRSSTPTCPWASNSTPACPLTSDSHSARPGQQLQPPPMAFQQLQQVHPAQAALPPS
QAQTHLAGPHHQNSPPNQPPWAPPPHQSPPTPQKVPHIQHSPSDPSSVTTASDRTSASGA
NLQPAYRDQQPTDTEQKPKKKKKKKPNGEKKQKKKKKKKKGIMEEGDEERKPDVGDSCGA
EVDPLTGALEESPAANKKTKKKPKDKEPKEPKPPKTLKMPKTPKEPKEKKARSTTPKAKM
PKKHSTKKVEAAEGSGSSVKETKRKREPSVSVNSDVEKSPPSDEEDDDGVQKRRSSRQVK
RKRYTEELEFRISDEDHDGDSPAPKSPSNNSEQQEVVETEGPVVEKIMAMRMGKKEVESG
EEMEVEEFYVKFKSFSYLHCRWADLEELEKDKRIHQKVKRFRAKQALATFVTEMDDEPFN
PDYVEVDRVLDESESTDENGEPVNLYLVKWCSLPYEDSTWELKADIDLAKIEEYEAVSAR
QPETKRVERPPTDGWQKSESSRDYKNDNALREYQLEGVNWLLFNWYNTRNCILADEMGLG
KTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVIVYHGSQASRKTIQA
YEMNYRDAQGRVIKGAYKFHAVITTFEMILTDCPELRSVPWRCVVIDEAHRLKNRNCKLL
EGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLEPERFPSENTFMQEFGDLKTEEQVQKL
QAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGGPGGGG
GAWGGGGAQVPNLLNTMMELRKCCNHPYLINGAEEKILEDFRENHHAEMAQFHLQAMIQA
AGKLVLIDKLLPKLKAGGHRVLVFSQMVRCLDILEDYLIQKRYPYERIDGRVRGNLRQAA
IDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKA
VKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENAANGVQQLSKKEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTQTITIESEGKGSTFAKASFVAAGNRTDISLEDP
DFWQKWAKKAELDMDAINGRNTLVIDTPRVRKQTRHYSSMKEDELAEFSELESDGENEKP
LTKPRRPQDRAQGYPRSECFRVEKNLLVYGWGRWGDILSHGRFKRPLREQDVETICRALL
AYCLLHYRGDENIKSFIWDLITPTEDGQSRTLTNHSGLSTPVPRGRKGKKGKPAPPAPPQ
LPRAEWLASCNPDLLLQEDSYKRHLKHHCNKVLLRVRMLYYLRQEVVGDQADRILEGTDS
SEMDIWIPQPFHAEVPADWWDSESDKSLLIGVFKHGYEKYNSVRADPALCFLERVGMPDA
KAIAAEQRGADMMADGPEGEDEDPEYKPLRMPFKDEMDDFTNSPLDDKEEAMDVESGESK
PGENGAGSRGAGRLYWPAASALTARLRRLITAYQRTHKREQLRQEAMARPDGRRRRRPRE
QLLSMVTDGGGAYVHEGGAFMAEGSPYMAKGGAFIPEATALLAEGGAFFKERRQRWTRRE
EADFYRVVSTFGVIYDTARQRFDWTQFRAFARLDKKTDESLEKYYFSFVAMCKRVCRMQV
KTDTELPDPTLIIDPITEERASRTLYRIELLRRIREQVLPHPLLGERLRLCQPSSDLPEW
WDCGRHDRDLLLGASKHGVSRTDYHILNDPALGFLEAHRKFTKGGSAGAPQPPREGAPST
ASEQAVAEKPSHVKEEDVEGKEVKEEGDNDLPCTKAEKPDEQEGKEDEMEGEKEEKAASP
KKELKDEKAKEEGDDLKDEEDQELTEEKMEVNGDSDGESSKEAGPEKEDTPNEDVGDQDK
SPEFQEKTESSKASEDQEIKKEKEGSPAKSPKSPNRVAEKGLEEEDEEKMEEDDKSEKSS
QAEVGATSEQKNFDEESNASLSTTARDETRDGFCPEDGEPSAIQRNFSFSFWPKDRVMIN
RMDNICEAVIKGKWPANRRQFFDIPGLLPGYPGPVVSESPLQRRGLAELSMVAAAQTSFS
GSEDLTLSPQVNEDALSMSLPKQRRRRRRKVEIEAERAAKRRNLMDMVAQLRESHQPESQ
SQAMDLTKGMHHHKAASSLAGYSSSSMVPSATLKAQMELLQAATPSRHRANGSLADADLP
TRRRRGRRKNVEGLELLFINNKRGATEDSEGTKASAEGVPMPPRSYRHNIPSPSASARVP
SVSAMEDGDPGTPSDKDLRDWLRQHPTYTMDMPTAYTPKSEELLLSSQFPKPKQKRHRCR
NPNKIDINTLTGEERVPVVNRRNGRKMGGAMAPPMKELPRWLLENPEFAIAPDWTDIVKQ
SGFLPEAMFDRLLTGPVVXEEGVRRRGRRPKSEIAKATAAAAAAQAQAASSGGLNPLLMN
GLFGGMDLTSLQGLQSFQSLQLQLMGFPGMGGADSKHASAMLPLMLPGMAGMGGLPNMFG
LGGLFGNNLAAAAASAAATPATASNGNNDEGDSDETSKRDDGEGGEEGDEDKEKDTGLEA
ESSEANRDATALNAAAAAMAASGMSASSLAFNPFLLSTMAPGLFSPYMFLPPGLGGLTMP
GFPPTTLADLQSAMAGAMGAASGAQGQEKEPSQAGPAPDRPAASTADPETADDSDSAESL
EKTAESSALEDEASALAEEADSPQDLVAEDEEEGEDAPEKSD
NT seq
9489 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccagggatgttgagcctgttcggggacgatgccaacctgttctcggacggg
ctggagggcctgggggactgtgggttcccccagggccagcccaaccccatggggcagcag
atgccccacgagcaccagggctatggttcgctctcctccaactccctccaccacccctcg
caggccgttcccggacagcccaagatgggccacccatacgaccccttcgcgggctacgag
cagcagcagggccggatgttgggcaacgggcccgccgtcaatggcatggcgtccccacat
tcgcgctaccacaacaatccccaacaacctggaggggggcaccacgtctattccggggcg
cagggtgacgggcgcggccagccattccctgacggaggagctgtgtggggcccccaggct
ggccccgggcagggactgcctccattccagcagcaacaggccgccacccaggccccctcc
caccaacaacacggcccctcagggccccacggccaccagatgggcccctacatgggccga
gccgactatgcgaccatgcagggccactctggtcagacccagacgccccctaggatcaac
cactttccccaaggtatgggtcaggagcccagccactacatgggccacgtggggctccag
cagaaccctagcatgacaggtccccccatgcgccacccagcccagcaacagcagcctcca
cagcagcacccgcaaccgcctacccagcagttcctccaccggcccagccaggaacccatg
gcctcccacacccctcgcttcccccacagcccctctcgccagcagcaggtcctggccggg
aggccccaccagaacatggggttcaacatgcacggccaggcagccccccctggtgctgta
accagctcagggcaataccccccctactcccagtacggcaaccttaatcagggattagcc
ggcagtgcagggatgagtcccgtcatgagcctcagcagcaccagcaacaacagtaacgcc
atggggccagcccaggtccagcgctaccccaatgtaggtggacccccacagcgctacacg
ggcccccaggtacaccagcagcctgtccaccccaaccaaatcaccggacagcccatgcac
ccttcccagcccatgcacccctctcaggcccaggccaccccccaacagcagccccacctc
cccacaccgcctcagggatcctacggctctcccccctccatgtccccaatgaggggaatg
ggaacccctgggggcacacctccgcctcaacagggccgccccccgagtgccggcctggct
ccagaggtagggggctacccaggagtcccactccagccccctaaccccatggcccccctc
agagaaaccccactcccatgggtgctcagcagccacacccccacctgcaacaccacactc
agcacccttcccacccgcagcagcacccccacatgcccctgggccagcaactctaccccg
gcatgccccctaaccagcgactcccactcggccagacctgggcagcagctgcagcctcct
cccatggccttccaacagctgcagcaggtgcaccccgcccaggctgctttgcccccgtcg
caggcccagacgcacctggccggcccccaccaccagaactctccacccaaccagccaccc
tgggcgccaccgccacaccagtcgcctccaaccccccagaaagtgcctcacattcagcat
tccccttcagatccatcatccgtgacgacggcttccgacaggacatccgcctcgggggcg
aacctccagccagcctaccgtgaccagcagcccacggacacagagcagaagccaaaaaag
aagaagaagaagaaacccaacggggagaagaagcagaagaagaagaagaagaagaagaaa
ggcattatggaggaaggtgacgaggagaggaagccagacgtcggggacagctgcggggct
gaggttgaccctctgacaggtgccctggaggaatcgccggcggcgaataagaagaccaag
aagaaaccaaaggacaaggagcctaaagaacccaaaccacccaagacactgaaaatgccc
aagacccccaaagagcccaaggagaagaaggccaggagcaccactcctaaagccaagatg
cccaagaagcacagcactaagaaggtggaggcagcagagggcagtggcagcagtgtgaag
gagaccaagaggaagagagaaccctcagtgtcggtcaactcagatgtggagaagtcacct
ccctctgatgaggaggatgacgacggtgtccagaagcggcgctccagtcgtcaggtgaag
agaaagcgctacaccgaggaactggaattcaggatctcggatgaggaccatgatggagac
tccccggctcccaagtccccctccaacaactctgagcaacaggaggtggtggagacagag
gggcctgtggtggagaagatcatggccatgcgcatggggaagaaagaggtggaatcagga
gaggaaatggaagtggaagaattctatgtgaagttcaagagtttctcctacctgcactgt
cgctgggcagatctggaggagctggagaaggacaaaaggatccaccagaaggtcaagcgg
ttcagggccaagcaggccctcgccaccttcgtaacagagatggatgacgagcctttcaac
ccggactatgttgaggtggaccgggtcctggacgagtcggagagcacagatgagaacggc
gagcctgtcaacctgtacctggtgaagtggtgctccctgccctatgaggacagcacgtgg
gagctgaaggccgacatcgacctggccaagatcgaggagtacgaggccgtctctgcccgc
cagcccgagacaaagcgcgtggagcgacctcccactgacggctggcagaaatccgagagt
tccagggattataaaaacgacaacgcactcagggaataccagctggagggagtgaactgg
ctgctcttcaactggtacaatacacggaactgcatcctagcagatgaaatgggcctgggc
aagaccatccagtcaatcacattcctctatgagatctacctgaaggggatccacgggccc
ttcctggtcatcgcccccctctccaccattccaaattgggagagggagttccgcacctgg
accgaactaaatgtgatcgtctaccatggcagccaggccagccgcaagaccatccaggcc
tacgagatgaactaccgtgacgcgcagggtcgtgtgataaagggagcgtacaaatttcat
gcagtcatcaccacgtttgagatgatcctgactgactgcccggagctgcgcagcgtcccg
tggcgctgtgtggtcatcgacgaagctcaccgcctcaaaaacaggaactgcaaactgctc
gagggactaaagatgatggacatggagcacaaggtgctgctgaccggaacacccttgcag
aacactgtggaagagctcttcagtctgctcaacttcctggagcctgaacgcttcccctca
gagaacaccttcatgcaggagtttggcgacctcaagactgaggagcaggtccagaagctg
caggccatcctgaagcccatgatgctgcgacgtctcaaggaggatgtggagaagaacctg
gcccccaaggaggagaccatcatcgaggtggagctgaccaacatccagaagaagtactac
cgggccatcctggagaagaacttctcctttctgtctaaaggaggaccgggaggtggtggt
ggtgcatggggaggcggaggggctcaggtccccaacctgctcaacaccatgatggagctg
aggaagtgctgcaaccacccctacctcatcaatggtgcagaggagaagatcctggaggac
ttccgcgagaaccaccacgccgagatggcccagttccacctgcaggccatgatccaggcg
gcgggcaagctggtgctgatcgacaagctgctgcccaagctgaaggccggaggacacagg
gtcctcgtcttctcccagatggtgcgctgcctggacatcttggaggactacctcatccag
aaacggtacccgtacgagcgtatcgatggccgcgtgaggggtaacctccggcaggctgcg
atcgaccgcttctctcgaccggactccgaccgctttgtcttcctgctgtgtacccgggcc
gggggcctgggcatcaacctgactgctgcagacacctgcatcatctttgactcggattgg
aacccccagaatgacttacaggcccaagccagatgccacaggattggccagagcaaggcg
gtgaagatctacagactcatcactaggaactcctatgagagggagatgtttgacaaggcc
agtctcaagctgggccttgacaaggctgtgctgcaatccatgagtgggcgagagaacgca
gccaacggggtgcagcagctgtctaagaaggaagtggaggacctcctccgcaaaggagct
tacggagctctgatggacgaggaggacgagggctcgaagttttgcgaggaagacattgac
cagatcctccagagacgaacccagaccatcaccattgagtccgagggcaaggggtccacc
ttcgccaaggcgagcttcgtggccgctgggaacaggacggacatttccctggaggaccca
gacttctggcagaagtgggccaagaaggcagagcttgacatggatgctatcaatggacgg
aacaccctggtgattgacacgccgagagtacggaagcagacacgccactacagctcaatg
aaggaggacgagttggcggagttctccgagctggagagtgacggcgagaacgagaagccc
ttgactaaacccaggcggccacaggaccgagcccaagggtacccccgcagcgagtgcttt
agggtggagaagaacctactggtttatgggtggggtcgctggggagacatcctgtcccac
gggcgtttcaagcggcccctgcgggagcaagatgtggagaccatctgccgcgccctgctg
gcctactgcctgctgcactaccgtggcgacgagaacatcaagagcttcatctgggacctc
atcacgcccaccgaggatggacagagccgcacgctcactaaccattccggtctgtctact
ccagtaccacggggtcgtaagggcaagaaagggaaaccagccccgcctgcccctccccag
ctccccagggcagagtggctggccagctgtaaccctgacctgctactgcaggaggacagc
tacaaaagacaccttaaacaccactgtaataaagttctcctgagggtccgtatgctctac
tatctgcgacaggaagtcgtcggtgaccaagccgaccggatcctagagggaacagactca
agtgaaatggatatctggatccctcagcctttccacgccgaggtccctgccgattggtgg
gacagcgagtcggacaaatcgctcctcatcggagtcttcaaacacggctatgagaagtat
aactcggtgcgcgccgaccctgcactgtgtttcttggagcgggtgggcatgcctgacgcc
aaggccatcgctgcagagcagaggggggcggacatgatggcagatggtccggagggagag
gatgaggacccagagtacaagcctctccgcatgccctttaaagatgagatggatgacttc
actaactctccccttgatgacaaagaggaagctatggatgttgagagtggtgaatctaaa
ccaggtgagaatggagcaggcagcagaggggcgggtcgtctgtactggccggcagcttcg
gccctcaccgctagactccgccgcctcatcactgcctaccagcggacgcacaaacgtgag
cagctccgccaggaggccatggcccggcccgacggccgccgccgccggcgtccccgagaa
cagctactctccatggtcacagatggtggaggggcctacgtgcatgagggcggagccttc
atggcagagggcagtccttatatggccaagggcggagcgttcattcccgaggctacggct
ctcctggcggaaggaggggccttcttcaaagagaggcgtcaaaggtggaccaggcgtgag
gaagctgacttttaccgcgtggtgtccacgtttggcgtgatctatgacacggcccgtcag
cgctttgactggacccagttcagggccttcgcccgtctggacaagaagactgacgagagc
ctagagaaatactacttctccttcgtggctatgtgcaaacgggtgtgtcgcatgcaggtc
aagaccgacacagagctcccagaccccaccctgatcattgaccccatcacggaggagcgg
gcatcacgcaccctttaccgcatcgagctgctgcgccgcatccgcgagcaggtgttgccc
caccccctgctgggcgagcgcttgcgcctctgccagcccagctctgacctgccggagtgg
tgggactgcggcaggcatgaccgcgacctcctcctgggtgcctccaagcatggcgtgagc
cgcaccgactaccacatcctcaacgaccccgccttgggcttccttgaggcccacaggaag
ttcaccaaggggggatcggctggggcgcctcagccgccccgcgaaggagctccctctact
gcctctgagcaggctgttgctgagaaaccctctcatgtcaaagaggaggatgtggaaggc
aaggaggtgaaagaggaaggtgacaacgaccttccatgtactaaagctgagaaaccagac
gagcaggaaggcaaggaagacgagatggagggagagaaggaagagaaggctgcgtctccc
aagaaggagttgaaggacgagaaagctaaggaggagggagatgacctaaaagacgaggaa
gaccaagaactgacggaagagaaaatggaggtcaacggtgattctgacggagagtcttcc
aaggaggccggacctgagaaagaagacactcccaatgaggacgtcggggaccaggacaag
agtccagaattccaggaaaaaacggagtcttccaaagcatcggaagaccaggaaatcaag
aaggagaaagaagggagtccagccaagtctcccaaatctcccaatagagtggctgagaaa
ggcctcgaagaggaggatgaggagaagatggaggaagatgacaagtctgagaagtcgtct
caagctgaagttggtgccacctctgagcagaagaactttgacgaggagagcaatgcctca
ctgagcaccacggccagagacgagacccgcgatgggttctgccccgaggatggagaaccc
tcagccatccagagaaacttctccttctctttctggccgaaggatcgcgtaatgatcaac
cgcatggacaacatctgcgaggcggtcatcaagggcaagtggccggccaaccgtcgtcag
ttcttcgacatcccaggcctgttgcctggataccctggacccgtggtgtcagaaagcccc
ctgcagaggcggggcctggccgagctgtcaatggtggcggctgctcagacgagcttcagc
ggcagcgaagacctcaccctctcgccacaggttaacgaggatgctctgagcatgtcgttg
ccaaagcagcgtcgccgcaggcggaggaaggtggagattgaggcggagcgtgccgccaaa
cgaaggaacctgatggatatggtggctcagctcagagagtctcaccaacctgagtcccag
agccaggccatggacctcaccaagggcatgcatcaccacaaggcagcgtcgtccctggcg
ggctactccagcagcagcatggtgccttctgctaccctcaaggctcagatggagctgcta
caggcggccacgccttccagacatagggccaatggctcattggccgatgctgacctgccc
acccggaggagacgaggccgcaggaaaaatgtggaggggctagagctgctgtttatcaac
aacaaaagaggagccacggaggattccgaggggaccaaagcgtcagcggagggggtgccg
atgcccccgcgttcctaccgccacaacattcccagtcccagcgcctccgcccgcgtcccc
tctgtcagcgctatggaggacggggaccctggtaccccctctgacaaggacctgagggac
tggctcagacagcaccccacgtacacaatggacatgcctactgcatacacaccaaagagt
gaggaattgctcctctcctcccagttccccaaacccaagcagaagcggcaccgctgccga
aaccccaacaagatcgacatcaacactctcaccggagaagagagggttcccgtggtcaac
cggagaaacggcagaaagatgggtggagccatggcgccacccatgaaggaactgccccga
tggctcctggagaacccagagtttgccatcgctcctgactggaccgacattgtcaagcaa
tcgggcttcctccctgaggccatgttcgaccgtctcctgactgggcccgtggtgnncgag
gagggcgtccgtcgtcgggggagacgccccaaatctgagatcgccaaagcgacggcggct
gctgcggcagctcaggcccaggctgcatcatccgggggcctaaaccctctgctgatgaat
ggcctgtttggaggcatggacctcaccagcctgcagggcctacagagcttccagagtctt
cagctgcagctcatgggcttccccggcatggggggggctgactctaaacacgcctcagcc
atgctgcctctcatgctgcctggtatggctggtatgggcggcctgccaaacatgtttggc
ttgggaggcctgttcggaaataacctggccgccgcagctgcctcggctgctgccacgccc
gctacagcctccaacggcaacaatgacgagggtgattcggacgagacatcaaagagagat
gacggggagggcggagaagagggggatgaggacaaggagaaggacactggattggaggca
gagtcgagtgaggctaacagggacgccactgctctgaacgcagccgctgccgcaatggca
gcctccggcatgtcggccagctcccttgccttcaaccccttcctgctgtccaccatggcc
cctgggctcttttccccctacatgttcctgccccctggcctgggaggtctcactatgcct
ggctttcctcccaccaccctggctgacctgcagagtgccatggctggtgccatgggggct
gcttctggagctcagggccaggagaaggagcccagccaggctggccccgccccggaccgc
cctgccgcatctaccgcagacccagagacagccgacgacagtgactcagcagagagcctg
gagaagacggccgagtcgtctgccctagaagacgaggcctccgcattggctgaggaagct
gactcgccgcaagacctagtggctgaggatgaggaggaaggagaggatgcccctgagaag
agtgactga
DBGET
integrated database retrieval system
