Oncorhynchus gorbuscha (pink salmon): 124009104
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Entry
124009104 CDS
T07892
Symbol
fubp1
Name
(RefSeq) LOW QUALITY PROTEIN: far upstream element-binding protein 1
KO
K13210
far upstream element-binding protein
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
124009104 (fubp1)
03041 Spliceosome [BR:
ogo03041
]
124009104 (fubp1)
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
124009104 (fubp1)
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124009104 (fubp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_PNO1_2nd
FUBP_C
KH_KHD4_2nd
Motif
Other DBs
NCBI-GeneID:
124009104
NCBI-ProteinID:
XP_046176556
LinkDB
All DBs
Position
LG22:49826334..49855770
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AA seq
644 aa
AA seq
DB search
MADYSNVAPPSGNGAGMNDAFKDALQRARQIAAKIGGDGVPAAPSGNEFGYGGQKRPLED
ADQPETKKVAPNDPFSAAMGMGGMGGGGPRSASEEFKVPDGMVGFIIGRGGEQISRMQQE
SGCKIQIAPDSGGMPDRSVTLTGSPDSIQAAKRLLTEIVDKGRPTPAFHHNDAGGPGMSV
QEMLVPASKAGLVIGKGGETIKQLQERAGVKMVMIQEGPQNTGADKPLRISGEPFKVQQA
KDMVMELIREQGFREQRGEYGSRMGGGGGGGGGEGLDVPVPRFAVGIVIGRNGEMIKKIQ
SDTGVRIQFKPDDGSTPERIAQIVGPPEQSQHAAEIISDLLRSVQQGGPGGPNGGGRGRG
RGXRGGNWNMGPPGGLQEFTFTVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPPNS
DPNIKMFTVRGSHQQIDYARQLVEEKIGGPVSPMGGPQGPPGPHGGPSPHGPPGPPGHPA
QMGPYNPGPYNQGPPGPHGPPAPYQPQGWGNGFPHWPQGQPDPGKAAADANAAAWAAYYS
QYQQQPQAPMTPTGGAPGTTQANGQGQQSQQPQDYTKAWEEYYKKQGQAAPQAGAAPGGQ
PAGQPAGQPDYSAAWAEYYRQQAAYYGQGSPQAMGAQPQAPQGQ
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggctgactactcgaacgtggctccgccgtcgggaaatggcgccggaatgaacgacgct
tttaaagacgcacttcagcgagctagacagatcgccgctaagattggtggtgacggcgtt
cccgcagcgccctcgggtaatgagtttggatacggaggccagaagcgacccctagaagac
gccgaccaaccagagaccaagaaggtggcaccgaatgacccgttctcggcagcgatggga
atgggaggaatgggaggtggtggaccacggtcagcatcagaggagttcaaggttcctgac
gggatggttggattcattattggaagaggaggagaacagatatcccgcatgcagcaagag
tcgggatgcaaaatccagatcgcccccgacagtggaggaatgcctgataggtcagtcaca
ctgacaggatccccagactcaatacaagctgccaagaggctgctgacggagatcgttgat
aagggtcgtcctactccagccttccaccacaacgacgccggtggccccggtatgtctgtc
caggagatgctggtccctgcctccaaggctggcctggtcatcgggaagggaggagagacc
attaaacagctgcaggagagggccggggtcaagatggtcatgatccaggaagggcctcag
aacacaggagcggacaaacctctacgcatctctggggaaccttttaaagtccagcaagcc
aaagacatggtgatggagctgatcagagagcagggcttcagggagcagagaggagagtac
ggctctaggatgggcggcggtggaggaggaggaggaggtgagggcctggatgttcctgtc
cccaggtttgcggtaggaatcgtgatcgggagaaacggagagatgatcaagaagatccag
agcgacacaggagtcaggatccagttcaaaccagacgacggcagtaccccggagaggata
gcccagatcgtgggtcctcctgaacagtcccagcatgcagcagagataatctctgacctc
ctgaggagtgtccagcaggggggtccgggtggtcctaacggagggggcaggggaagaggc
agggggtaacggggtggtaactggaacatgggtcctccaggaggactgcaggagttcacc
ttcaccgtcccgaccatgaagactggactcatcatcggcaaaggaggagaaaccatcaag
ggcatcagtcagcagtctggagcgcgtattgagctccagagaaatcctccccccaactcc
gaccccaacattaagatgttcaccgtccggggatctcatcaacagatagactacgcacgg
cagctggtcgaggagaagatcgggggtccagtcagtccaatgggtggtccccaaggtcct
ccaggcccccacggaggtccgtctccccacggcccccccggtcctcctgggcaccctgct
cagatgggcccctacaaccccggcccctacaaccagggaccgccaggaccacatggtcct
ccggctccctaccagcctcagggttggggcaacggcttccctcactggccgcaaggacag
cctgatcctggtaaagctgcagctgatgccaacgcagcggcctgggcagcgtattactcc
cagtaccagcagcaaccccaggcccccatgacgcccaccggcggtgcccctggcaccaca
caggccaacgggcaagggcagcaaagtcagcaaccacaggactacaccaaggcctgggag
gagtactacaagaaacaaggtcaagcggcccctcaggcgggagctgcaccaggtggtcag
ccggccggtcagccagccggtcagccggactacagtgctgcctgggcagagtactaccgt
caacaggctgcttactacggacagggaagcccacaggccatgggggcacagccacaagca
cctcagggccagtaa
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integrated database retrieval system
