Oncorhynchus gorbuscha (pink salmon): 124009216
Help
Entry
124009216 CDS
T07892
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ogo04515
]
124009216
Cell adhesion molecules [BR:
ogo04515
]
Immunoglobulin superfamily
Other
124009216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_6
Sp38
ChitinaseA_N
DUF6034
DUF1461
Motif
Other DBs
NCBI-GeneID:
124009216
NCBI-ProteinID:
XP_046176742
LinkDB
All DBs
Position
LG02:73967006..74144180
Genome browser
AA seq
2059 aa
AA seq
DB search
MWLVTLLLLYSLQEVHSEDVGSTRLYFVNASLQRLTYSSSVGVSLPCPAGGTPTAILRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSYIHDNDYFCTAENQAGKIRSPNIRVK
AVFREPYTVRVADQRSMRGNVAVFKCLIPTAVQEYVSVVSWERDTVSIIPANRFFLTSFG
ALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESSPSILDSFLAGEVRAG
LSVELPCIAAGYPSPTVRWLKDGRPLPSDAHWTRRLTGLTISDLRQEDSGSYVCEVTNSF
GSKEVSGALYVIDPLRVTLSPKSLKTGISSTLFFTCAVEGSPEYTVAWYRNTDPIIPDQH
ISIQGPHNDTLQITAAQKSHSGAYQCFASRKGHTAQDFSIILLEDGTPRIVSSFSERVVA
PGEPFSLMCGAKGAPPPSITWTLDDEPVVRDSAYKTSQYTLSDGLTVSHVNVSSPAIRDG
GVYRCAARNSAGSAEYQARINVRGSPRIREMRDITAVAGRNTFITCRVIGYPYYSIKWFK
DGMLLPDNHRQVVYENGTLRLSDVQKGMDEGTYLCSVLIQPQTSIDQTVHVTVKVPPLIQ
PFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSASGVGIETKEFMSSLQISK
VTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFVVQPNNQDGIYGKAGVLNCSVEGYPP
PKVMWKHAKGIGNPQQYHPVPLTGRIQIMGNGSLLIRHVLEDDRGYYLCQASNGVGSDIS
KSMVLTVKIPAMITSHPNTTMAIKGQVKELNCTARGEQPIIIRWERGDTVIDAERNPRYS
ITINKKGDEVISTLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREV
KDRSMNLRWIQRFDGNSIITSYDIEYKNKSDTWDHKYTTRNISPTNNQANIVELHPACVY
SIRMYSFNKIGRSQPSKELTISTEEAQPDGPPMDVILHPMTSQSIRVTWRAPRKELQNGV
IRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSS
SEINATTLEDVPSQPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRVVFWSLFPDGG
GCCGGQAQGPMQKWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQ
TREDLPGPPAGIKAVPSSPSSVVVSWLPPHKPNGVIRKYTIYCSSPGSGQPAPSEYETNP
EMLFYRITHLTRGKQYLIWAAAVTTAGRGNISEKVTVEPAGKAPAKILSFGGTVTTPWMK
EIRLPCSSVGEPTPTFKWTKDSEYTAIPVTVDGQRQILSNGTLVLRSVKAEDSGYYTCTA
TNTLGFDTIIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNT
EEWRDVFITSTERSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPAFNKEQ
PLLTHINSTHAGLNLQGWTSGGCPITTLLLDFRPKGTWAWQSLKANATAQLFLSELREAT
WYELKMKACNSAGCGNQSSQFATTDYDGSTIPPINSAQEDRDDVKKLFSIGSPVILVTLG
VALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSMDTPVKGPPQGPRLHIDIPRVQLL
IEDKEGIKQIGEDKAAAPVTDSEFSQSVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPG
TNPVSRKSVKSAHSSRNRYSSQWTLSRPGQSQSTASARTLTSDWRTMGSHGITATESDSY
SASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKITITECFISDSSSDQ
MTTGTNDPADSMTSLSTPSETGLCRFTASPPKPQDYDRGRPTNVAVPIPHRANKSEFCNL
PLYMKTDPFFRKQAELHDPCPAVPPREASIRSLAQRAYHTQGRHMTLDPSKQQALTLGNS
GLASLGVSSGTATLPQRTLTMPSSNPAATASTSSTSSNPTGSSTKMGGSRDSLLENSSSA
LGRLQKQGVGAYSKSYTLV
NT seq
6180 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttactcctgctgtactctctccaggaagtacacagtgaggatgtg
ggctctaccaggctgtactttgtgaacgcgtccctccagaggctgacctactccagctca
gtgggggtgtctctgccctgtccggcgggcggcacccccaccgccatcctgcgctggtac
ctggccaccggcgatgacatctacgacgtgccccacatccgtcatgtccatgccaatggc
accctccaactctaccccttctctccctccgccttcaactcctacatccacgacaacgac
tacttctgcaccgcagagaaccaggctggcaagatccgcagcccgaacatcagagtcaaa
gctgtgttcagggagccgtacacggtgcgtgtggcagaccagcgctccatgcggggcaac
gtggccgtgttcaagtgcctcattcccaccgccgtgcaggagtacgtcagcgtggtgtcc
tgggagagagacaccgtttccatcatcccagctaacaggttcttcctgacatcctttggt
gctctgtacatctcagatgtccagaaagaggatgccctctccacctaccgctgcatcacc
aagcacaaatacagtggagagacacgccagagcaatggagccaggctgtctgtcatggac
cccacagagtcgtctccctctatcctggacagtttcctagcgggggaggtgcgggcgggt
ctgagtgtggagcttccctgcattgcagcagggtaccccagccccacagtgcgctggctg
aaggacggccgcccactgccttccgatgcccactggacgcggcgcctcacgggtctgacc
atcagtgacctcaggcaggaggacagcggcagctatgtctgtgaggtcaccaacagcttc
ggctccaaggaggtgtccggagcactttatgtcatagaccccctgcgagtgaccctttct
cccaagagtctaaagacgggcatcagcagtaccctgttctttacctgtgctgtggagggt
tctccagagtacacagtggcctggtacaggaacacagaccccataatcccagatcagcac
atctctatccagggcccccacaacgacacactgcagatcacagcggctcagaagagccat
tctggggcttaccagtgcttcgcctcccgcaagggccacactgcccaggacttctctatc
atactgctggaggatggtactcctcgtatcgtgtcgtccttcagtgagcgcgtggtcgcc
cccggggagcctttctccctgatgtgtggcgccaaaggagccccacccccttccatcacc
tggacgctggacgatgagcctgtggtgcgagactccgcctacaagacaagccagtacacc
ctatcagacggcctgaccgtgtcacatgtcaacgtcagcagcccggccatccgcgacggg
ggagtgtatcgctgcgccgcacgcaactcggccggtagcgccgagtaccaagcgcgcata
aacgtaagaggttctcctaggatcagggagatgcgtgacatcacggctgtagctggaagg
aacacctttataacctgtcgtgtgattggttacccatactactctatcaagtggtttaag
gacggcatgctgctgcctgacaaccatcggcaggttgtgtatgagaatggaaccctgagg
ctgagtgatgtgcagaagggcatggacgagggtacctacctgtgtagtgtgctcatacag
ccacagacctccatcgaccagactgtccacgtcactgtgaaagtgccgcccctgatccag
ccctttgacatcccttccacgtcggtgggaaagctgatgtacatcgcctgcgtggtgtcg
tcaggtgacatgcctatccgcatcacctggcacaaagatgggcagcttatcgtgcctggc
tccgcctccggcgttggcatagagaccaaggagttcatgagctccctgcagatctccaag
gtgaccctgaagcacaacggcaactacacctgcattgctagcaacgccgcggcaaccgtc
agctgggagagacaactgatcgtcaccgttccccctcgctttgtggtacagcctaacaac
caggatgggatctatgggaaggcaggagtactcaactgctctgtggagggataccctcct
cccaaagtcatgtggaaacatgccaaaggtatagggaacccccagcagtaccaccctgtg
cctctgactggtcggatccagatcatggggaacggctccctgctgatccgtcatgtcctg
gaggatgaccggggatactacctctgtcaggcctccaacggagtgggctctgacatcagc
aagagcatggttcttactgtcaagattccagccatgatcacgtcacaccccaacaccact
atggccatcaagggccaggtgaaggagctgaactgcacagcgcggggagagcagcccatc
atcatccgctgggagaggggcgacaccgtcatcgacgccgagaggaacccccgctactcc
atcaccatcaacaagaaaggggacgaggtcatctccacgctcaagctgaagccagcagag
cgcggggactcagtcttcttctcctgccacgccatcaactcatatggagaggggcgagga
ctcatccagcttaccgtgcaagagcctcctgaccctcctgagttggaggtgagagaggtg
aaggaccgcagtatgaacctgcgctggatccagaggttcgacggcaacagcatcatcacc
agctacgacattgagtataagaacaagtctgatacttgggatcacaagtacaccaccagg
aacatctcccccactaacaaccaggctaacatcgtggagctgcaccctgcctgtgtctac
agcatccgcatgtactccttcaacaagatcggacgcagccagcctagcaaggagctcacc
atcagcactgaggaagcacaacctgatgggccccctatggacgtgatcctccatccaatg
acgtcgcagagcatacgggtcacatggagggcccccaggaaggagcttcagaacggggtg
atccggggctaccagattggttaccgtgagaacgggccgggcagtaacggccagtacagc
attgtggagatgaaggccacaggggacagcgaggtgtacactctggacaacttgaagaag
tttgcccagtatggagtggtggtccaggccttcaacagggctggtactggcccctctagc
agtgagatcaacgctaccacactggaggatgtgcccagccagccaccccagaacgtgcgg
gccatctcagtgacgtcagacgaggcggtgatcacatgggcggagcccccgcgtctgacg
ctgcatggcgtgctgaagggctaccgcgtggtgttctggtccctcttccctgacggaggt
gggtgctgtgggggccaggcacaggggccgatgcagaaatggggagagatgcagaacatc
actacaactcgtgagcaggtggagctgagagggctggagaagttcactaactacagtgtc
caggtgctggcctacacacaggctggggacggggtcaggagcaatgtcctgtacatccaa
acccgcgaggacctcccaggtcctccagctggtatcaaagctgtgccctcatctcccagc
agtgtggtcgtgtcctggctacccccccataaacccaatggtgtcatccgcaagtacacc
atctactgctccagcccaggctccggacagccggctcccagtgagtatgagaccaaccca
gagatgttgttctacaggatcacccatctgacccgcggtaaacagtacctcatctgggcc
gccgctgtgacaaccgctggccgcggcaacatcagcgaaaaggtcaccgtggagcctgct
gggaaagccccagctaagatcctgtcgttcgggggcacagtgaccactccctggatgaag
gagatccgtttgccttgcagctcagtgggagaacccacccccaccttcaaatggaccaaa
gacagtgagtacacggctattcctgtgactgtggacggacagcgtcagatcctgtccaat
ggtactctagtgctacggtccgtcaaagctgaggattctgggtactacacgtgcacggcc
accaacacgctgggctttgacaccatcattgtcaacctgctggtgcaagttcctccagac
cagccccgtctgaccgtctccaccacctctacctcttccatcaccctggcctggatacct
ggggacaacggaggcagctccattagaggttttgtcctgcagtactcggtagacaacaca
gaggagtggagggatgtgttcattacctccactgagcgttccttcaggctggacaacctg
cgctgtggcacctggtacaaggtcaaactggcagccaagaacagtgtgggttcaggacgc
atctctgagatcatcgaggccaagacgcacggacgagagcctgcgttcaacaaggagcag
cccctgctcacccacatcaactccacccacgcggggctcaacctgcagggctggaccagc
ggaggctgccccatcaccactctgctgctggacttccggcccaagggcacgtgggcctgg
cagagcctgaaggccaatgccacagcccagctcttcctcagcgagctgcgggaggccacc
tggtacgaactgaagatgaaggcctgcaacagtgccggctgtgggaaccagagctcccag
ttcgccaccacagactacgatggcagtaccatccctcctataaactcggcccaggaggac
agagacgatgtgaagaagctgttctccataggctctcctgtcatcctggtcaccctgggc
gtcgccctgctcttcatcatccgcaagaaacgcaaggagaagagactgaaacgactcaga
gatgctaagagccttgcagagatgcttatcagtaagaacaaccgcagcatggacacccca
gtgaagggtcctccccagggcccccggctccacatcgacataccccgtgtccagctgctc
attgaggacaaggaggggatcaaacagataggtgaggacaaggcagcggccccagtgacg
gacagcgagttcagccaatcagtgaatccacagagcttctgcacgggcgtgtctctgcac
caccccgccctcatccagaacacagggccattgattgacatgtcagacatccgccctgga
accaacccagtgtcgaggaagagtgtgaagtcggcccacagctccaggaaccgttactcc
agccagtggaccttgagcaggccgggccagagccaatcaacagcctctgcaagaactctg
acctctgactggcgcaccatgggctctcacggcatcaccgccaccgagagtgacagctac
agcgccagcctgtcgcaggacactgataagggtcgtaacagcatggtgtccacagagagt
gcgtcgtctacgtacgaggagctggcacgggcctacgaacacgccaaactggaggagcac
ctgcagcatgccaagatcactatcacagaatgtttcatctccgacagctcctctgatcag
atgaccactggcaccaacgacccggctgacagcatgacatcactcagcacgccgtccgaa
acaggcctctgtcgcttcaccgcctcgccacccaaaccccaagattatgaccgcggcaga
cctaccaatgtggccgtgcccatcccccaccgcgccaacaagagtgaattctgcaacctc
ccactctacatgaagacagaccctttcttcaggaaacaggcagaactgcatgacccgtgt
cctgctgtaccgccccgggaggcctccatccgcagcctggcacagcgggcgtaccacacc
cagggccgtcacatgactctggacccgtccaagcagcaggccctgacgctgggaaactct
gggctggccagcctgggtgtgagctcaggtactgccaccctgccccagaggactctcact
atgcccagctccaaccctgcagccacagcctccacctccagcaccagcagtaatcccact
ggctccagcaccaagatggggggctccagagactcactgctagagaacagctcctcagcg
ttgggtagactgcagaagcaaggggtcggggcctactccaagtcttacacactggtgtag
DBGET
integrated database retrieval system
