Oncorhynchus gorbuscha (pink salmon): 124009276
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Entry
124009276 CDS
T07892
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogo03041
]
124009276
Spliceosome [BR:
ogo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124009276
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
124009276
NCBI-ProteinID:
XP_046176858
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All DBs
Position
LG22:complement(12985213..13008709)
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AA seq
542 aa
AA seq
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MDGIATDVAVGVKRGSDELNLYSTSPNSVTANGNDSSKKLRVEDRMESPPSRVLHIRKLP
SEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVPVF
IQFSNHKELKTDSALNQRAQAVLQAVSAVQEGGSPNSDTSALDSVLAQAPSPVLRIIIDN
MFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQARLSLDGQNIYNSC
CTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSLDPAMAAALNKDSSLLGTPSGM
VAPYSSGGGFQSSLSYSQGGGAISPLSAAAAAAAAAGRVALSGHSGCSGVLLVSNLNEEM
VTPQSLFTLFGVYGDAQRVKILYNKKDSALIQMSDGNQAQLAMSHLNGQKMYGKIIRVTL
SKHQTVQLPREGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNVPEDVTEE
DLRQLFSNAGGTVKAFKFFQGHKMALLQMSTVEEAIQALMDLHNYDMGSNHHLKVSFSKS
TI
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattgccactgatgttgcagttggcgtgaagagaggctcagatgaattaaat
ctctacagcaccagccctaactctgtgactgctaacggcaatgacagcagtaaaaaactg
agagtagaggacaggatggagagtcccccatcccgggtgctccacatccggaagctgccc
agtgaggtgtctgagacagaggtcattgccctgggcctaccgttcggcaaggtcaccaat
atcctcatgctgaagggcaaaaatcaggcgttcctcgagctgggtacagaggaggcggcc
gttacaatggtgaactactatacggcagtgacgcctcaggtccgcaacgtcccagtgttc
atccagttctctaaccacaaggagctcaagacagacagtgctctcaaccagcgtgcacag
gctgtcctacaggcagtgtcggcggttcaggagggtggctctcccaactctgacaccagt
gcgctggatagtgttcttgcgcaggcccccagccctgtgctcaggataataattgacaac
atgttctaccctgtcactctggacgtcctccagcagatcttctccaagtttggaacagtc
atgaagatcatcacgttcaccaagaacaatcagttccaggccctgcttcagttcagcgaa
ccagtcaacgcccaacaagccagactgtccctggacggccagaacatctacaactcatgc
tgcacactgcggatcgacttctccaaactggtcaacctcaatgtcaagtacaacaacgac
aagagccgcgactacacccggcccgagctgcccgctggcgatggccagccctccctagac
cctgccatggctgccgccctcaacaaggactcctccctgcttggtaccccctcaggaatg
gtagctccctactctagcggtggagggtttcagtcttctctctcctactcgcagggcgga
ggagccatcagtcctctgagtgctgcggccgcagcggcggctgctgcggggagggtagcg
ctctccggacactctggctgcagcggcgtgctcctggtcagcaacctcaacgaagagatg
gttacgccccaaagtctgtttaccctcttcggggtgtacggtgatgctcagcgcgtgaag
atcctctacaataagaaggacagtgctctcatccagatgtcggacgggaaccaggcccag
ctcgcaatgagccacctgaacggccagaagatgtacgggaaaataatccgtgtgacgctc
tccaagcaccagacggtgcagctgcccagggaagggctggatgaccagggcctaaccaag
gacttcaccaactcccccctgcaccgcttcaaaaagccaggctccaagaactttcagaac
atcttccctccgtccgcgacgctccacctctccaacgtcccggaggacgtgactgaggag
gatctgagacagctgttctctaacgcaggtggcactgtgaaggcattcaagtttttccaa
ggccacaaaatggcgctactccagatgtctacagtcgaggaggccatccaggccttgatg
gacctccacaactacgatatgggcagcaaccaccacctgaaggtctccttctccaagtca
accatctag
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