Oncorhynchus gorbuscha (pink salmon): 124009334
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Entry
124009334 CDS
T07892
Name
(RefSeq) histone deacetylase complex subunit SAP130-like isoform X1
KO
K19192
histone deacetylase complex subunit SAP130
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124009334
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
124009334
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP130_C
Motif
Other DBs
NCBI-GeneID:
124009334
NCBI-ProteinID:
XP_046176962
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All DBs
Position
LG22:13220212..13244986
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AA seq
1077 aa
AA seq
DB search
MFPSADQGSNEMHAGVGYQVCQKMSSQQYPRPGIPPGMGQNQTPGGNTALLSGSQPNTAG
GADDRNRDPHPDHGPRDHPNSGGGALTFRDDKQETVVVRPYPQAQVHGPPQCHPTPAGHL
SLQQGMPVTVSAPPPHIPQALPLAFTEGPMKPALKSPMAGRVIAPAPANTQGHITLPPKV
PSHVTATMESTVPQTAGIPVATISGQQAWRFQGNPSNLHHHLMTTNVQIIRSHAPPLQLG
SPGAPQHTFTSHLPRGAAAAAVMSSSKGPTVLRPATGGGTGPPTVQHIIHQPIQSRPVVT
TSTAVMPTVVAPLTATRPQSPVVSSATHSAEMVHGRPGLNIHPPSATLSIQRQPPSRDNP
TRITLPSHPAIGGQKPQLPHTMAQKPIFSNVTPVAAATVAPILATNTAPSPSTTGSGPHP
QMTNSNIVTMTMTSHSSHATAVTTSNIPVAKVVPQPIAHTSPRIQPEYPGERGNLIPISG
HRSSPNPITMEARNDNRQSVPVQFQYFLPTYPSSPFPLTHTYTPITSSVSTIRQYPVTPQ
APSGTAMQTQTSVGVASAVHLNPMQLMTVDRIAQINTQNIQPAGMATQGIQPTTISAQGL
HSATGQITAQNIQPAPINPQQPANENKTSIVLADGTTLVTNPIGQTFGGSQPPTSVGQTH
PQNTGPGAPTLVSSPRPSILRKKPANEGSAVRKNLIPEANSPRIDGGIRHASGFPRPAGV
KHKPDLHVSLAPPVMSSSMEALPSHQTNEHQQHPGAPPHQQPSQPIQTLLSVSAPPHSQP
GPALSAITPPILSMANVVIPPTQSAASSTAACGISSTLPEIKIKQEVEVMDTSKPGPPMP
HCGTPLLSMMPSGDVTPGASPRKKPRKQQHVISTEESEMMETNSTDEEKVLARPLSMRAE
KRKSPLKEYIDEEGVRYVPTRARPPVTLLRHYRNPWKAAYHHFQRYSDIRVKEEKKGTLQ
DVANQKGVVCRAQGWKMHLCAAQLMQLTNLEHDVYSRLTTLQEGLIPKKKAGSDDDLHRI
NELIQGNMQRCKLVMDQITEARDTMMKVLDHKEKVMKLINKNGGAKKVNKLKRKDKA
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgtttccatctgccgaccaagggagtaacgagatgcatgctggggtaggctatcaagtg
tgtcagaagatgagttctcaacaatatccacggccgggaatacctcctggtatgggacaa
aaccagactcctggaggaaacactgcattgctgtctggtagtcaaccaaacacggcagga
ggagcagacgataggaaccgtgaccctcacccagaccacggtcctcgtgaccaccccaac
agtggtggtggagcattgaccttcagggacgacaagcaggagacagtggtggtccggcct
tacccacaagctcaggtccatggacccccccagtgtcaccccactccagcaggtcacctg
tcactccagcagggcatgcctgtcacagtgtcagcccctcctccacacatcccccaggcc
ctgcctctggcattcactgaaggacccatgaagccagctctgaagtcgcccatggccggt
cgagtgatcgccccagcaccagccaacacccagggccacatcaccctgccacctaaggtg
ccaagccacgtcactgcgaccatggagagcaccgtgcctcagaccgctggcatccctgta
gcaactatcagtggccaacaggcgtggcgtttccagggcaaccccagtaacctgcaccat
cacctgatgacgaccaatgtgcagatcattcgcagccatgcaccgcccctgcagctcggc
tcccctggagccccccagcacaccttcacctcccatctacccagaggagctgctgcagct
gctgtgatgtccagttccaaaggacccacagtactgagacctgccacaggtggtggcact
ggcccccctactgtccagcacatcatccaccagcccatccagtcccgccctgtagtcaca
acgtccacagctgtgatgcccacggtggttgccccattaacggccaccaggcctcagtcc
ccagtggttagctcagccacgcactccgcagagatggttcatgggcgtccaggactaaat
atccacccgccttcagccactctgagcattcagcgtcaacccccatctcgggacaacccc
acacgcatcaccctgccctcccaccctgccattggggggcagaaaccccagctgccccac
accatggcacagaagcccatattcagcaatgtgactcctgtcgctgctgcaactgttgcc
cccatattagccaccaatactgctccatcgcctagcactacaggctccggaccccacccc
caaatgaccaacagtaacattgtcaccatgacgatgacttctcattcctctcacgccaca
gcagtcaccacgtccaacatccccgtggctaaagtggttccccagccgatagcccacacc
tcgcccaggatccagccggagtaccctggagagaggggaaacctgatccccatctctggt
caccgctcctcccccaaccccatcaccatggaggcccgcaatgacaacaggcaatcggtg
ccagtgcagttccagtacttcctgcctacctacccttcttcaccgttccccctgacacac
acctacacccccatcaccagctctgtgtccaccatccgacagtacccagtaacccctcag
gcccccagcggcacggccatgcagacccagacgagtgtgggggtggcgtcggctgtgcac
ctcaaccccatgcagctgatgacggtggaccgcatcgctcagatcaacacgcagaacatc
cagcccgccggcatggccacgcagggcatccagccaaccaccatcagcgcccagggcttg
cattcggccaccggtcagatcaccgcacaaaacatccaaccggcacccatcaacccacaa
caaccagccaatgagaacaagacctctattgtgttagcagacggcaccactctggtaacc
aaccccatcggccagacgttcggcggcagccagcctcccacctctgtgggtcagacacat
cctcaaaacactgggcctggtgcccccaccctggtgtcctctccccgacctagcatccta
cgtaagaagcctgccaacgaggggtctgcagtcaggaagaacctgatcccagaggccaac
agccccaggatagacggaggaatcaggcatgcatcagggtttccacgcccagcaggtgtg
aaacacaagcctgatctccacgtgtccctggctcccccggtgatgtcatcatccatggag
gctctgcccagccatcagaccaatgaacaccagcagcatcccggagccccgccccaccag
caaccctctcagccaatccagacgctcctctcagtgtcagcacccccacactcacagcct
ggccccgccctgtccgccatcactccaccaatcttgtctatggccaacgtggttattccg
cctacccagtcagcggccagtagcacggcggcatgtggaataagctccaccctccctgag
atcaagataaagcaggaggtggaggtcatggatacctccaaaccaggtccccccatgccc
cattgtggtacccccttgttgtccatgatgcccagtggggatgtgacccccggtgcctca
cccaggaagaagccccggaagcagcagcatgtcatctccacggaagagagcgagatgatg
gagaccaatagcacggacgaggagaaggtcctagccagacccctcagcatgagggccgag
aaacgcaagtcgcccctcaaggagtacatagatgaggaaggggtgcgttatgtccccacc
cgtgctcgtcccccggtcacactcctccgccactacaggaacccctggaaggctgcctat
caccacttccagagatacagtgacatccgggtcaaagaggagaagaagggcaccctgcag
gacgtagccaatcagaaaggggtggtgtgcagagcacagggctggaagatgcacctgtgt
gctgcacagctcatgcagctgactaatctggagcatgacgtgtacagccgcctcacgacc
ctccaagagggtctgatcccaaagaagaaggccgggtcggatgatgacctgcaccgtatc
aatgagctcatacagggtaacatgcagcgctgtaagctggtgatggaccagatcactgag
gctagagacaccatgatgaaggtgctggatcacaaggagaaagtcatgaagctaatcaac
aagaacggtggagccaagaaagtcaacaagctgaagcgcaaggacaaagcctag
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