Oncorhynchus gorbuscha (pink salmon): 124009369
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Entry
124009369 CDS
T07892
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124009369
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124009369
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124009369
03029 Mitochondrial biogenesis [BR:
ogo03029
]
124009369
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124009369
Membrane trafficking [BR:
ogo04131
]
Autophagy
Autophagosome formation proteins
ULK complex
124009369
Mitochondrial biogenesis [BR:
ogo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
124009369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
124009369
NCBI-ProteinID:
XP_046177090
LinkDB
All DBs
Position
LG22:complement(28731345..28753271)
Genome browser
AA seq
1639 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTELAVQTVLDLKHAIQVKYKIATQHQVLVVNGGECMVAERRVC
SYSAGTDTNPIFLFNKEMILCDRAPTIPKTTFSIENEMELKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLWKFDTAYMNYQQ
DFEDIKLKLTKLGTAVSVMAKIPLLECLTRHSYRECLEKSCSTPAKDSEEEKSTDSVLCP
TPPETQRSSTKLPTSVCAPEAGGSPDTAQAQEGSEMTDSSGLRAALQEADSPERANPPSF
NVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLSECRDTIAKLDNQNMKAIKG
LEDRLYALDQMIASCNKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHANQLMIML
TNHRKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELMERVR
VVDALSTVPQMYCLAVVEVVRRKIFIGHYREWACALVKDGKRLYETEKYKRETFGKLFRK
SFLRNRLFRGLDSWPPTSFCTRKPRKFDFELPDISLGDLQYLKTCCPTEVQPFLRLPTLC
DFEPLHQHVEMLQQLVLATQAASVDEMSRTITDLLSEQRVSCSQSAQRSTAVVAPLTTRS
NSTPGTIFTSSMTPSSLSLLGPLCQPLPGHGPTTLEDLSPDSIDAQTFHFETIGHPNMDP
VLQQAGSLDLDSLAESPESDFMSAVNEFVIENSPTPISDPTSPGMMVESLYSSVINAIDS
KRMHDTTTLERENSKMAALKLSMEKYRTAAEESQTNLRSVKDDLYHHRDLLLKEQRDFGF
ALKTMTIEVRNMVDTIRKREEEEHQAELLSLQQDHENQLQALMEENQVNKNIVKDMQRAM
LELEGLLEHKKKELTQLEVEREDWAEAENGHTQTARVLEQKISDQAQEVQTLAASRDSLA
SQLETLHIEIERGQQKIRQELEGAQQSHLQELEERMRHQHQVQLDTLARENQEALEHLAT
ENRAKLSEVTDLHTATLTERDCQLRDLEARVIELADLRCKLEVELALKESETEEVRLLYE
EAKQGQQEANVGKATVEAETQSLSEQLAQVNRQLQARNEEYETDLAELRRLMEKDQCISE
LVDRHEEERNQLHRELTALQQQTLDTERSRVEQLQNLQRDLDLQTVALCEDKEKQRGSSE
EQEQHLRTVICHLQVENDLLAKRIEQDTQTAQERLEKEKALKAAVPDDFKDLKQQKEEME
KRLSDKIRQLECDLQERQSSEREAGLSEVQTEGRGSDAGAPLSLDSALQEHLQQETASLH
TQLELLERRKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEQIINDLTEKLRKVTQQQEK
DKGLIETLSEDRAIVMQEKKQLEEDLNRLRSTALVSSTYYSPNLLALEPTGTGPGPGHCP
GPGTEVEFGAGACYSEPFLDTDRPASVAAIREDDKVDSAVEASMVTVHDNILMMSEEKQR
ILLLERTLHMKEEENKRLSQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNY
VLFTVGPTLYFLHSESLTALDLKPDPMFTSASGASRRPWVLGKVMEKEYCQAKKAQNRFK
VPLGTKFYRVKAVSWNKKV
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtattccaggtcaacaatggaagcactctgacatttgacacagaactt
gctgtccaaacagtgttggacctcaaacatgccatccaggtcaagtacaagattgcaacc
cagcatcaagtcctggttgtgaatggaggggagtgtatggttgcagagaggcgtgtctgc
agctacagtgctggcacggacaccaaccccatattcctgttcaacaaagagatgattttg
tgtgaccgggctccgactatcccgaaaaccaccttctctattgagaatgagatggagctc
aaggtggaggagtcactaatgatgccagcagtctttcacaccgttgcctctcgaacacaa
cttgctgtggaaatgtttgaagttgccaagaaactttgctctttctgcgaacgcctggtt
catgatgaacacctccaacaccaaggctgggctgccatcatggccaacctggatgactgc
acgctgtcctatcagaagctactgtggaaatttgacacggcatacatgaattatcaacaa
gactttgaggatatcaaattgaaactgacaaaactggggacagcagtctcagtcatggcc
aagatccccctactggagtgtctgacccgccacagctacagagaatgtctagagaagtcc
tgctccactcctgccaaggactccgaggaggagaagtctactgactctgtgctctgcccc
accccccccgaaacacaaaggagctccaccaagttacctacgtcagtctgtgctccggag
gcggggggctcacccgacaccgcccaagcccaggaaggcagtgagatgactgacagtagt
gggctgagggcagctcttcaggaggcagactctccggagagggccaaccccccgtccttc
aacgtcacactgctggactggatcaacgttcaagaccggcccaatgacgtggaatcagtt
gtgaggaaatgctttgactccatcaataggctcgacccacggatcattcaaccattcttg
tcggaatgtcgagacacgatagccaaactggataatcagaacatgaaagccatcaaaggg
cttgaagaccggttatacgctctagaccaaatgatagcaagctgtaacaagttggtcaat
gaacagaaggaacttgctcagggatttctggccaatcagaagcgtgctgagaacctgaag
gatacgtccgtgctgcctgacctgtgtcttagtcacgccaaccagctgatgatcatgctg
accaaccaccggaagctgctggacatcaaacagaagtgtaccactgccaaacaggaactg
gcgaacaacctacaagttcgactcaaatggtgctgctatgtgatgctgcacgcggatcag
gacggagagaagctgcaggccttgctgaggctgctgacagagctgatggagagggtccgg
gtggtggacgccctcagcaccgtgcctcagatgtactgcctggccgtggtggaggtggtc
cgcaggaagatcttcataggccactacagagagtgggcctgtgctctcgtgaaggatgga
aaacgtctctatgagactgagaagtataaaagggaaacgtttggcaagttgttcaggaaa
tcttttctcagaaatcgcttgtttagaggacttgactcatggccccccacttcattttgc
acacgaaagcccagaaagtttgactttgagcttccagatatttcccttggtgacctacag
tacttaaagacctgttgtcctacagaggtgcagcctttcctcaggcttccaacactgtgt
gactttgagcctttgcaccagcacgtggagatgcttcaacagttggtgctagctactcaa
gctgccagtgtagacgagatgtctcgaactatcactgacttactgagcgaacaaagggtg
tcgtgcagccagagtgctcagagatccacggcagtggtggccccgttaaccacgcggtcc
aacagcaccccggggaccatctttacctcctccatgaccccatcctctctcagtctcctg
ggcccactctgccagcccctccctggccacggccccacaacgctggaggacctgtcccca
gacagcatcgacgcccaaaccttccactttgagaccattggccaccccaacatggaccct
gtcctgcaacaggccggttctctggacctggactccctggctgagagccccgagtcagac
ttcatgtcggcggtcaacgagtttgtgatcgaaaactcgcccacccccatcagcgacccc
accagcccagggatgatggtggagtcgctgtactcttcggtcatcaacgccatcgacagc
aagcgcatgcatgacaccaccactttagagagggagaactccaagatggccgctctaaag
ctgagcatggagaagtaccgcactgctgcagaggagtcccagaccaacctgcggagcgtc
aaggatgacctgtaccaccacagagacctgctgctgaaagagcagcgagactttggcttc
gccctgaagaccatgaccattgaggtgcgcaacatggtggacaccatccgtaagagagag
gaggaggagcaccaggccgagctactctccctgcagcaggaccacgagaatcagcttcag
gccctgatggaagagaaccaggtcaacaagaacattgtaaaagacatgcagcgggccatg
ctggaactggaggggctgctggagcacaagaagaaggagctcacccagctggaggttgag
agagaggactgggccgaggcagagaacggacacactcaaacggccagggtcctggagcag
aagatcagcgatcaggcccaagaggtgcaaaccctggctgcctccagagactccctggcc
agccagctggagacgctgcacattgagatcgagcgcggccagcagaagatccgccaggag
ctggagggggcccagcagtcccacctgcaggagctggaggagaggatgaggcatcagcac
caggtccagctagataccctggcccgggagaatcaggaggccctggagcatctggccaca
gagaacagagccaagctgagtgaggtcactgacctgcacaccgccaccctgacagagagg
gactgccagctgagggacctggaagcccgggtcatcgagctggctgacctgcgctgcaag
ctggaggtggagctggccctgaaggagtctgagacagaggaggtgaggctgctgtacgag
gaggcaaagcaggggcagcaggaggccaatgtggggaaggccaccgtggaggctgagacc
cagtccctcagtgaacagctagcccaggttaacaggcagctgcaggccaggaacgaggag
tacgagaccgacctggctgagctgaggaggctgatggagaaggaccagtgcatctctgag
ttggtggacaggcacgaagaggagaggaaccaactccacagagagctgaccgccctgcag
cagcagaccctggacaccgagaggagccgcgttgagcagctgcagaacctccagcgagac
ctggacttgcagacagtggcactgtgcgaagataaggaaaagcagagggggagttctgag
gagcaggaacaacacttaaggactgttatctgccatttgcaggtggagaacgacctgctc
gccaaaagaatagagcaggacacacaaacagcccaggaacgtttggagaaagagaaggcc
ttgaaggctgctgtaccagatgactttaaagacttaaagcaacagaaggaggagatggag
aaaagactgtcagacaaaattaggcaacttgaatgtgaccttcaggaaagacaatcctct
gaaagagaggcagggttgtcggaggtacagacagagggtcgggggtctgatgcaggggct
cctctctccctggactctgcattgcaggagcatctgcagcaggagacagcctcgctgcac
acccagctggagctcctggagaggaggaagaacgaggagatgcagaacctcaagacctcc
ctcattgcagaacaacagactaacttcaacactgtgctgacgagagagaagctgaaaaag
gaacagatcatcaatgatctgacagagaagctgcggaaagttacccagcaacaggagaag
gacaaaggtctaatagagacactatctgaagaccgggccatcgtcatgcaggagaagaag
cagttggaggaggacctgaaccggctgcgcagcaccgccctggtgtcctcgacctactac
agccctaacctcttagctctggagcccactggaaccgggcctggacctgggcattgtcct
ggtcctgggactgaagttgagtttggggctggagcctgctactcggagcccttccttgac
acagacagaccggcctctgtggccgccatcagagaggacgacaaggtggactcagctgtg
gaggccagtatggtgaccgtacacgataacatcctgatgatgtccgaggagaaacagcgg
atactgttacttgagaggactttacatatgaaggaagaggaaaacaagcgcctcagtcaa
agactgatgtctcaaagcatgtcctcggtgtcgtcacggcattcagagaaaatcgccatc
agagatttccaggttggtgacttggttctgatcatcctagatgaaaggcatgacaactat
gtactgttcaccgtgggtcccaccctgtacttcctccactcagagtccctcactgccctg
gacctcaaaccagatcctatgtttacttcagcatcaggagcctcaagacggccgtgggtt
cttggaaaagtgatggagaaggaatattgccaggcgaaaaaggctcaaaaccggttcaaa
gttcctttgggcaccaagttctacagggtgaaagctgtttcatggaacaagaaagtataa
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integrated database retrieval system
