Oncorhynchus gorbuscha (pink salmon): 124009374
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Entry
124009374 CDS
T07892
Name
(RefSeq) rho guanine nucleotide exchange factor 18-like
KO
K21066
A-kinase anchor protein 18
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124009374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124009374
Membrane trafficking [BR:
ogo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124009374
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
SOS1_NGEF_PH
PH_13
ATP-grasp_4
PH_SLA1
BppL_N
Motif
Other DBs
NCBI-GeneID:
124009374
NCBI-ProteinID:
XP_046177105
LinkDB
All DBs
Position
LG22:complement(42517263..42567394)
Genome browser
AA seq
1087 aa
AA seq
DB search
MDDLDAVRGLSPRPAPEDSVSLSTSSTDTINLEDGHYSALRAEMEADARDLEAESWSVAV
DQQHINSLHQDAVKRQDVIYELIQTEVHHVRTLKLLLSVYQYELRHSLHMEDTRLERMFP
QIDSLLHIHQHFLWCLRDGRDRHNHHTVTQLGDILINQFSGEMGERMKENYGVFCSHHTD
AVGLYKEQLQNNKKFQNLIMKIGRLSIVRRLGVPECILLVTQRITKYPVLVERILLNTEA
DSEEHGALVQALALIKETISAVDSQVHDYERASRLRDIGGRLEPRSHGRWKDGRVFTRED
LAEGLRTLLHEGTVNCRVANGRLKDIHAVLLSDVLLLLQKEKDQKLIFANVDNKTSVISL
QMLIVREMAHEDKAMFLISASSSMPEMYEIHTSSREECNAWMSLIRDAVNSCPVMEEQLS
NEQEEARLARLRDFQERLYVKDSQIMQSLTEKLQMFADMVEAVTGMEDGAAHSCLLLRGD
ASELQQGETLLKGAITEVENLQNLLLSGVTVRDPHPHPEDSLGLGRFSLRPEVVRLYLGG
LGLGRLGNLSVHRRAETFGGYDCNPPTPIKNVEGRPQRSNSDPQLQDLDQSESLELSFFY
AVLTLSHRLYGLQAIVSQQDSHIELQRASHLVRERPGRNRGNMLLEQEKQRNLEKQREEV
ANFHKLQTQHRQNQARWEKERERHRLQAEVLEAELRQREEECRRLEKKLEMEREELERQR
ETYQQDLERLRESMRTVEKQKEHLNTQMKLKQNKTVTNPGSFNFRAQQAPLSQSFRGDLP
LSQSIRGDPPLSQSFRVDPSLSQSFRVDPSLSQSFRGDLPLSQSFRGDPSLSQSFRGDLP
LSQSFRGDLPLSQSFRGDPSLSQSFRVDPPLLSQSFRGDPPLLSQSFRGDLTADWMKGRE
VIQIPKVLVPPSPSVATNIFLEQPPEVPPRRESISPGPPKPEFPIHLISTTNQVVHKPGA
VQQQIPTKLAVLGNKGKEKSSKKRSHHKRNHSAASIEMSQVVPIRVTGNQSLRGKKTVSP
QRNYQSDDFFSPPEPLSSAKPSQTLSSSSSMRTNNQSHVPPPKPPPPPPPFPKDIASKPT
KEHVIYL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctggatgctgtcagaggactgtctccccggcctgctcctgaggactcggtg
tccctctccacgtcctccacagacaccatcaacttggaagatggtcactactctgccctg
cgagcggagatggaggctgatgctcgggacttggaggcagagtcctggagtgttgctgtg
gaccagcagcacataaacagcctccaccaagacgctgtaaagaggcaagatgtcatctac
gagttgatccagacagaggtgcatcatgtgcggaccctgaagctgctgctgagtgtttac
cagtatgagctgagacacagcctacatatggaggatactaggcttgagaggatgttccct
cagatcgacagcctgctgcacatccaccaacacttcctgtggtgtcttagggacggccgg
gacagacacaaccaccacactgtcacacagctgggagatatactcatcaaccagttttca
ggtgagatgggagagaggatgaaggagaattacggcgtgttctgtagtcaccacactgac
gctgtcggtctctacaaggaacagctacagaacaacaaaaagttccagaacttgattatg
aaaatcggtcggttgtccatcgttcggaggttaggagtaccagaatgcatcctgttggtg
actcagcggatcacgaagtaccccgtcctggtggaacgcattctactgaacactgaagcc
gacagtgaggagcacggtgccctggtccaggccctggctctgatcaaagagaccatctct
gctgtggactcccaggtccatgactatgagagggcctccaggctgagagacataggcggc
aggctggagcctcgttcccatggccggtggaaggacggcagggtgttcacgagagaggat
ctggctgagggcctcagaaccctgctccacgaggggacggtcaactgtcgggtggcaaac
ggtcggctcaaagacatccacgctgttctgttgtcagatgtcctgctgctgttacaaaag
gaaaaggaccagaaactcatatttgcaaatgtggacaacaagacgtcggtgatctccctc
cagatgctgattgtcagggagatggcccatgaggacaaggctatgttcctgatcagtgct
tcgtccagcatgccagagatgtacgagatacacacctcctccagagaagaatgcaatgcc
tggatgagccttatacgagacgctgtcaacagttgtccagtaatggaggagcagctgagc
aatgagcaggaggaggccaggctcgccaggctcagagacttccaagagcgtctgtatgtg
aaggattcccagatcatgcagagcctgacagagaagctgcagatgtttgctgacatggtg
gaggctgtaacagggatggaggatggagctgcccactcctgtctgctgctccgcggtgat
gcctcagaactccagcagggggagacactgctcaagggagccatcactgaggtggagaat
ctacagaaccttctcctgtccggtgtgactgtgcgagatccccacccccatccagaggac
agcctgggactagggaggttcagtttgaggccagaagtggtacggctttatctaggaggg
ctaggccttgggcggctggggaacctgtcggtgcataggagagctgagacctttggaggt
tacgactgcaaccctcccacccccatcaagaatgtggagggacgacctcaacgttcaaac
tctgacccccagctacaggaccttgaccaatcagagagcctggaactgtcgttcttttac
gccgtgctgacgctctcacataggctttacggtctgcaggccatcgtctcccagcaggac
agccacattgagctccagcgtgcctctcatttggtgcgtgagcgtccgggtcgcaaccga
ggcaacatgctcctggagcaggagaaacaacgtaacctggagaaacagagagaagaggtg
gccaacttccacaagctgcagacacagcaccgtcaaaaccaggctcgctgggagaaggag
cgggagcgtcaccggctgcaggcggaggtcctagaggcggagctaagacagagagaggag
gagtgtaggagactggagaagaaactagagatggagagagaggagctggagagacagaga
gagacataccaacaggatctagagaggctgagggagtcgatgaggacggtggaaaaacag
aaggagcacctcaatacacagatgaagttgaagcagaacaagaccgtcaccaaccctggg
agttttaacttcagagctcagcaggctcccctctcccagtccttccgaggggatcttccc
ctctcccagtccatccgaggggatcctcccctctcccagtccttccgagtggatccttcc
ctctcccagtccttccgagtggatccttccctctcccagtccttccgaggggatcttccc
ctctcccagtccttccgaggggatccttccctctcccagtccttccgaggggatcttccc
ctctcccagtccttccgaggggatcttcccctctcccagtccttccgaggggatccttcc
ctctcccagtccttccgagtggatcctcccctcctctcccagtccttccgaggggatcct
cccctcctctcccagtccttccgaggggacctgacagctgattggatgaaaggaagagag
gttatccagatccccaaggtccttgtcccccccagcccctctgtagccaccaacattttc
ctggagcagcccccggaggtgccccctcgcagggagagcatcagccccgggccccctaaa
ccggagttccccatccacctgatcagcacaaccaaccaggtggttcataaaccaggggcc
gtgcaacagcagatacccaccaagttggctgtccttggtaacaagggcaaggagaagagc
agtaagaagaggtcccaccacaagcgcaatcacagtgcagcgtccatagaaatgtctcag
gtggtgccgatcagagtgacaggaaatcagagtctgagagggaagaagactgtgagccca
cagagaaactaccaatcagatgatttctttagtcctccagagcccctgtccagcgctaag
ccctcccagaccctgtcgtccagcagcagcatgaggaccaataaccagagccacgtccct
ccacccaaacctccacctccccctccacccttccccaaagacatagcaagcaaaccaacc
aaggaacacgttatctacctgtaa
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integrated database retrieval system
