Oncorhynchus gorbuscha (pink salmon): 124009404
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Entry
124009404 CDS
T07892
Name
(RefSeq) neurabin-1-like isoform X1
KO
K17551
neurabin
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogo01009
]
124009404
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogo04812
]
124009404
Protein phosphatases and associated proteins [BR:
ogo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124009404
Cytoskeleton proteins [BR:
ogo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124009404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ_5
PDZ
SAM_2
SAM_1
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
124009404
NCBI-ProteinID:
XP_046177174
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All DBs
Position
LG22:35463409..35478182
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AA seq
1379 aa
AA seq
DB search
MMRTDNKGRSASPHRNAYKSDFHTIKCSLDAVTRPRPSSLGASIPSPGSMAVPHTRTSSG
GNPGEGTRGGALSPRGTKIKDNIFFQMDSQQHLLHPLSEALPKHPLSSSSVRSSVASMSS
VELSMLDKPSKAEEIAEIDRAALAQKFSVTRKLFETVIGGQRLNVSPGRDGIRLVESGEE
RGIGSARSRLDREQLTSMSESEGEGERRKELMHISLPNIEFHTATSSLGISLPTSLHPVN
GHNSETFSPDCRSPTTDPSDRRSVYGRSVLDGSVCENFVFSHVSNPSSPAPTSPHSQPPS
PSSNSPSPLTPVAPCSDQTDLYSPSSPNADLLDNRSLSEGNHPNDLYVTPDVPLTPKEVS
GAGTVRAELVEVKNESSESDGNEGEEEGKRVEGNENNLVDDVFEESRVEPRIVEPTSAQR
TVEPRMVEKRTVEPPVEPRMVECVEGFPDSLEVTEQESESERDMKQQETEQREDRMEGEN
RLISQEMEQHRGEGTTGDSQKVEVEVKGDEAGEQEEKELEERETMCSDSKEKTREEVGEE
EVKEKAGLEDGGIDFREEEERKCRGRVEVKEEQESEERECTEGGDEENGFAAVLGIENEA
FMEDGELNSECHDDLEWHRKDWEQLFMEYEEIPSLPHEDDEDVESAKRRKIKFSAAPIKV
FLTYSNADYDRRNDDVDPVSASAEYELEKRLDKMDIFPVQIKKGVEGLGISIIGMGVGAD
QGLEKLGIFIKTITENGATQQDGRIQVNDQIVEVDGVSLVGVTQLFAATVLKNTIGTVRF
FIGREKQGEESEVARLINESLEQDKTPSTLEVLIDGVVGLSSVEETVEVLCTDDEEDEEK
EITSCIRCQQLQLKVRTKSDQLCLVWEKLRGCEQQQALWESHQAELKERVQDGEEKADKL
EKYWQEAQALCRIVNQRLADTQSQLDSLEVKYSKAKRLLREFQHREKESEGREEELQREM
EESERIHGETVERLQRRIGLLERGEMVPESDNQSLDTLFTSSADWSIAVPVTDLLDTSAH
RARAQLAQKTKRHPPSRDKLRESFRQQGEEDHIQSCGGKSQSLTAIAPRETGRSVSAGGH
HVHSSTSSLSALTSKPHPPFLLTPQPGQSPPKEDKSSTTCKSKRRFPDFSGLRKSLRRGR
KCEEKKNKERPLDHRGLRVNLVDAPSGGVFPSVSSAPSCLPFSWFGERGREKERGKLRSV
SSSSLPYMTAGGSRDCQRVNVGDSGSPSSALLSGMLSDLSLSAHSQTPTFSSENLDDDSV
PVGNDYQWQSRPLDQWTNQQVCLWLIGMSMDQYAAQFTANGVDGLQLLSLDNNKLKALGV
CSHSDRAALKRRLKEMRKTLEREGKERAKGKEEREHEKRMKERKEARHSGKKVRNESLC
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggacggacaataaaggccggagcgcctccccccacaggaacgcctacaagtct
gacttccacaccatcaaatgctccttggatgccgtgaccaggcctagaccttcttccctg
ggcgcctcgatcccttcacctggctccatggcagtccctcacaccaggactagcagtgga
ggtaaccctggtgagggtaccaggggtggggccctcagccctagaggaactaagatcaaa
gacaacatcttcttccagatggacagccaacagcacctcctccaccccttatctgaagcc
ctgcccaaacaccctctcagctccagctctgtccggagcagtgtggccagcatgtccagt
gtagaattgtctatgctagataaaccgtctaaggcagaggagatagcagagatagacaga
gctgctctagcccagaagttctcggtgacccggaagctctttgagacggtcattgggggt
caacgtttaaatgtcagccctggcagagatggcataaggttggtggagagtggggaggaa
agggggattgggagtgcaaggagcaggttagacagggagcagctgacatccatgtcagaa
agtgaaggagagggggagagaaggaaagaactcatgcacatttcactacccaacatagaa
ttccatacagccacttcctcactgggcatcagtttgcctacatcccttcaccctgttaat
gggcacaacagtgagacattttcccctgactgtagaagtcctacaactgacccctcagac
cgcaggagtgtgtacggtcgaagtgtgttagatgggagtgtgtgtgagaactttgtgttc
tcccatgtatccaacccttccagcccagcacccacctccccccactctcagcctccatcc
ccttcttccaactcccccagtcctctcaccccagtcgccccttgttctgaccagactgac
ctctatagccctagtagtcctaatgctgacctcctggacaacaggagtttgtctgagggg
aaccaccctaatgacctttacgtgacccctgatgtccctttgacccccaaagaagtgtca
ggggctggaactgtaagggcggagctagtggaggtgaagaacgagtcgtctgagagcgac
ggtaacgaaggagaggaggaaggcaagagggtagagggcaatgagaataacctggtggat
gatgtgtttgaagaatccagagtggaacctagaatagttgaacctacatcagcacaaaga
acagtagaacctagaatggtggaaaagagaacggttgaacctccagtagaacccagaatg
gtagagtgtgtggagggattccctgacagtcttgaagtgacggaacaggaaagtgaatca
gaaagagacatgaaacagcaggagacagaacagagggaagatcgaatggagggagaaaac
agacttatcagccaagaaatggagcagcacagaggagaggggacaaccggagacagtcag
aaagtggaggtagaggtgaaaggagatgaggcaggagagcaggaggaaaaggaacttgag
gagagagaaaccatgtgcagtgacagcaaagaaaagactagggaggaggtgggagaggag
gaagtgaaagagaaggccggattggaagatggagggattgacttcagggaagaagaggaa
agaaagtgcagagggagagtggaagtgaaggaagagcaggagagtgaagagagggagtgc
actgagggaggagatgaggagaatggatttgctgctgtccttggaattgagaatgaggcc
tttatggaggatggggaactgaactctgagtgtcatgacgatttggaatggcacagaaag
gactgggagcagctttttatggaatatgaggagattcccagtcttccccatgaggatgac
gaggatgtggagtctgctaagaggaggaaaattaagttctctgcagcaccaatcaaggtg
ttcctgacctactcaaatgcagactatgaccggcgtaatgatgatgttgaccctgtgtct
gcctctgctgagtatgaactggagaagagactggacaagatggacatcttccctgtccag
ataaagaaaggagtggagggcctgggtatcagtataatagggatgggggtaggggctgac
caggggctggagaagttggggatcttcattaagaccatcactgagaacggagctacacaa
caggacggacgtatccaggtgaatgaccagatagtggaggtggatggggtcagtctggtc
ggagtcacacagctgtttgctgccaccgtgctgaagaacaccattggcactgtcaggttt
tttattggacgggagaagcagggagaggagagtgaggtggcccgtctaatcaatgagagt
ctggagcaggacaagacaccgtctacgttagaggtgttaattgatggtgttgttgggctg
agctcagtggaagagacggtagaagtcctctgtacagatgatgaagaggatgaagagaaa
gaaatcaccagctgcatcagatgccaacagctccagttaaaagtcaggaccaaatcagac
cagctctgcctagtgtgggagaagctgagggggtgtgagcagcagcaggccttgtgggag
agtcatcaggctgagctgaaggagcgtgtccaggatggagaggagaaggctgacaaactg
gagaagtactggcaggaggcccaggctctgtgcaggattgtgaaccagcgattggctgac
acccagagccaattagacagcctggaggtaaaatacagcaaggccaagagactgctgaga
gaattccaacacagggagaaggagagcgaggggagagaggaggagctgcagagagagatg
gaggagagtgagaggatacatggagagactgtggagagactccagagacggataggtctg
ctggagagaggggagatggtccctgagagtgacaaccaatcactggataccttatttacc
tcaagtgcagactggagcattgcggtgcctgtgacagatctgttagacaccagcgctcac
agggccagagcgcagctcgcccaaaaaaccaagagacaccctccctcacgagacaaactc
agagagtccttcagacaacagggtgaggaagaccatattcagagctgtggcgggaagagc
caatcactgactgcgatcgcaccacgagagactggacgatcggtctcagcaggcggtcac
catgtccactccagcacatcctctctgtctgccctcacctccaagccccacccccccttt
cttctcaccccccagccaggccagtccccccctaaagaggacaagtcatctaccacatgc
aaatcaaagaggagattccctgacttcagcggcctccgcaagtctctgaggagagggagg
aagtgtgaggagaagaagaacaaggaaaggcccctggaccacaggggtttacgtgttaac
ctggtagatgcccccagcggtggtgtctttccctctgtatcctccgcgccctcctgccta
cccttctcctggtttggagagcgagggagggagaaggagagagggaagcttaggtctgtc
tccagcagcagtctaccatacatgaccgccggaggcagtagagactgccagagagtgaat
gtaggagactcaggtagtcccagctctgctctcctatcagggatgctgtcagatctgtct
ctctctgcacactctcaaactcccaccttctcatcagagaacctggatgatgactctgta
ccagttggtaacgattaccaatggcaaagccggcccctggaccaatggactaatcagcaa
gtctgtctgtggttgattggcatgagcatggaccaatatgcggcccagttcacagccaat
ggtgtggatgggctgcaacttctcagtctggacaacaacaaactcaaggctctgggtgtg
tgcagtcacagtgaccgtgctgctctgaagagaaggctgaaggagatgaggaagactctg
gagagagagggaaaggagagagcgaagggaaaggaggagagggaacatgagaagaggatg
aaggagagaaaggaggccaggcatagtggtaaaaaggtccgaaacgagtccctctgctga
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