Oncorhynchus gorbuscha (pink salmon): 124009424
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Entry
124009424 CDS
T07892
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3-like
KO
K20493
leucine-rich repeat-containing protein 16
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124009424
Membrane trafficking [BR:
ogo04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
124009424
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
LRR_6
Motif
Other DBs
NCBI-GeneID:
124009424
NCBI-ProteinID:
XP_046177195
LinkDB
All DBs
Position
LG22:33640941..33683238
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AA seq
1218 aa
AA seq
DB search
MLRVGGLNLQGGFSETYAALCDYNGIGCKEEVQWDVDTIYHSQDNREFNLLDFSHLDSRD
LAVMVASMAYNTWFTKLYCKDMRIGSEVVEQVLHTVSKSSSLEELTLENAGLKSDFPQKM
ATALSENPASVIHSLNLAHNPPGQPRSVKPHPTGVSPQQRPSSAQPLQDVPLRVVSLSQA
LCSSDDYTNSLLHLDLSKNPGILSGEDATNMYLFLAQTNCLVHLDLSGTDCAVDLLFGAL
LRGCCADLSYLNLSKNCFSHRKVRETLPVFRQFFSSAFSLTHVNLSSMKLPLDTLRALFL
GLSSNPHITDLHLDISGCELRSAGAGVLQELFPRVACIGTLDISDNGLDGDLLGVIPAFS
RHPSLKHLLLGKNFNIKGRVLHEILQKLVQLVQDEECALQSLSLADSRLRSRGTVMVNAL
GSNACLRKVDLSGNSLEDAGAKMLSKALQINTTLRSVTWDRNNTTATGFQDVARGLEHNF
TLQYMPIPLSDVTQAYRSAPEKIEQALTKIQHALLRNNQTQRFSQKQALRLHQGLVTSTA
EQVMERLCVRVHQQVCVLRGSEEGKELQAARQVLKEARNSRALYPSLCELVHVLSVDGPV
RQKLDFLAGELTKAADKELQVIVDSMVSLCRELCPMSSSAAERLNPPLSSISERVSIPRS
TIRTALMERAAQDINRALEEVKLSVVSYLTNSIVDQILQELYTTHKALLRQVSQVKRWDD
GGTGRHTIRITDTLDFPDEEGLGMNIDTIAIQKRSARTRRIRPVSTRLSLGDDPTSSPPP
SALSHSAPLSRSASWECLSSLPTHGAPLRHVTHARPRPPRRHSRGQVPLDTHCSENGGVN
LLEDGLPDFYTKRVLTDSQLSSLHHAQSLRRKKRRSVLSIFSGFRKNRNSTISNQETDGS
ENVYSMIQHPKDPGKVEAMIEVGANGRMMPSPRPIQGVPLPGMRGASPHCLTQRQPSDLV
SMVYSCIGAEDEDSDSSFETRPVDRDTDRSTTSDIQTETHANGHAMSSASLTDRQPDRQP
DRQTDPVSLPMPSTQTYTQKEVDRGTKGTELLDRQEGAPCGQKSEPPSQSSKPSLASMRQ
RHLQGSSDKSTDGVGWIDRDGVEEEKNEKKDREAEGQRPPIPEKPGKDKTSPKTLSAVTP
PEETANERTPPPVPTASTEPTFDLSGPSVTQDGGANEMKSLPPVPPASTKPVVDAGLPPA
GCQGPECPEPGTDNGETS
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtgttggagggttgaacctgcagggcggtttctctgagacctacgcagctctg
tgtgactataatggcatcggctgtaaggaggaagtgcagtgggatgtggacaccatctat
cactctcaagacaacagggagttcaacctgttggacttcagccacctggacagcagggac
ctggcggtgatggttgcttccatggcgtacaacacttggttcaccaaactctactgcaaa
gacatgcgcattgggtcagaggtggtggagcaggtccttcacaccgtcagtaagtccagc
agtctggaagaactcactctggagaacgctggcctcaaatcagatttccctcagaaaatg
gcgacagctctgtctgaaaaccctgcctctgtgatccactcactcaacctggcccacaac
ccccctggacaaccaaggagtgtcaaacctcatccaactggtgtgtcgcctcaacaaagg
ccttcgtctgctcaacctctccaagacgtccctctccgtgtggtgtctctctcccaggcc
ctctgctccagtgatgactacaccaactctctgcttcacctggacctgagtaagaaccct
gggattctgtctggggaggatgctacgaacatgtacctgttcctagcccagactaattgc
ctggttcatttggacctctctgggactgactgcgctgtggacttgctatttggcgctctg
ctgaggggatgttgtgctgatctctcttacctgaatctctccaagaactgcttctctcac
aggaaagtgagggagactcttcctgtcttcaggcagttcttcagctcagccttcagtctc
acacacgtcaacctgtcttctatgaagcttcctctggacaccctgagagctctcttcctg
ggcctgtcttccaatcctcacatcaccgatttacacttggacatcagcggctgtgagctg
aggtcggcaggtgccggggtgctccaggagctgtttcctagagtggcctgcatcggaact
ttggacatatcagacaacgggttggatggtgacctgctgggtgtcatcccagccttctcc
agacacccctccctcaaacacctgctgctgggcaagaacttcaacatcaagggcagggta
ctacatgaaattctgcagaaactagttcagctagtgcaagatgaagagtgtgccctgcag
tccctttctctggctgactcgcgcctgcgctctcggggcacggtgatggtgaatgctctg
ggaagcaatgcttgcctacgcaaggtggatctgagtgggaacagcctggaggatgcgggg
gctaagatgctcagcaaagccctgcaaatcaacactacactcaggagtgtgacgtgggat
cgcaataacaccacggctacaggatttcaagatgtggctcggggcctggaacataacttc
accctgcagtacatgcctatccccctcagtgatgtcacacaggcataccgaagcgcacct
gagaagattgaacaagcactgaccaagatccagcatgctctgctgaggaacaaccagacc
cagaggttctctcagaaacaggctctgcgtctacaccagggcctggtcaccagcactgct
gaacaggtgatggagcggctgtgtgtacgcgtacaccagcaggtgtgtgttctccgaggc
tcagaagaaggaaaggagctgcaggctgccagacaggtcctgaaggaggccagaaactct
cgtgcgctatacccatctctgtgtgagctggttcatgttctctcagtggatgggcctgtc
agacagaaactggactttctggcaggagagctgaccaaggctgctgataaggaactacag
gtgatagtagactccatggtgtctctgtgtcgggagttgtgtcccatgtcctcctctgca
gcagagagactcaaccctccgctctcatccatctcagaacgcgtctctatccctcgctcc
accatccgcaccgccctgatggagagagcagcacaggacatcaacagagccctggaggag
gtgaagctgtctgtggtctcctatctgaccaactccatagtggaccagatccttcaggag
ctctacaccactcacaaagccctgcttcgtcaggtgtcccaggtgaagcgttgggatgat
ggaggaacaggcagacacaccatcagaatcacagacacactggacttccctgatgaggaa
ggcctgggcatgaacatcgacaccattgccatccagaagcgcagcgccagaacccgaaga
attcgacctgtatccaccagactgagtctgggagatgatcccacctcctctcctcctccc
tcggccctgtctcactctgcccccctgtcccgctcagcatcatgggagtgtctatcctca
ttgcctacccatggtgcaccactgcgccacgtgacgcacgccaggccgcggccccctcga
aggcacagccgaggacaagtccctctggacacacactgttcagagaacggaggagtcaac
ctgctggaggatggactgcctgatttctacaccaagagagtcctgactgacagtcagctg
tcatcacttcatcatgctcagtccctgaggaggaagaagagacgcagtgtgctgtcaatc
ttctctgggttccgcaagaatcgcaattccaccatctccaatcaggaaacggatggctca
gagaatgtgtactctatgattcagcaccctaaggatcctgggaaggtggaggccatgatt
gaggtgggggccaatgggaggatgatgccgtcccccaggcccatccagggtgtaccactg
cctgggatgaggggggccagcccccactgtctcacacagagacagccttcagacctggtc
agcatggtgtacagttgtatcggagcagaagatgaggactccgacagtagctttgagacc
agaccagtggacagagacactgacagatcgactacatcagacatccagacagagacccat
gccaatggacatgcaatgtcctccgcttctctgacagacagacagcctgacagacagcct
gacagacagacagatccagtcagtctgccaatgcccagcactcagacatacacacagaag
gaggtggacagagggacaaaggggacagagttgttggacaggcaggagggagccccctgt
ggacagaaatcagaacccccttctcagagcagcaagcccagtctggccagcatgagacag
agacacctgcaggggagttccgataaatcaacagatggtgtaggatggatagatagagac
ggggtagaagaggagaagaatgaaaagaaagacagagaagcagaaggacagcgtcctccc
attcctgaaaagcctggtaaagataagacttctccaaagacactgtctgctgtcactcca
cctgaggaaacagccaatgagagaaccccgcctcctgttccaactgcctctaccgagccc
acttttgatttgtctggtccttctgtcactcaagatggaggagctaatgaaatgaaaagc
ctgcctcctgtgccacctgcgtctaccaagccggtggtagacgcaggtctaccacctgct
ggttgtcaaggtcctgaatgtcccgagcccggcaccgacaatggtgagacgtcatga
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