Oncorhynchus gorbuscha (pink salmon): 124009442
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Entry
124009442 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124009442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124009442
Membrane trafficking [BR:
ogo04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
124009442
Endosome - Golgi transport
Arf GTPase associated proteins
124009442
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
124009442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
PH_11
PH_6
PH_3
RA
PH_8
PH_13
RNR_Alpha
Ras_bdg_2
Motif
Other DBs
NCBI-GeneID:
124009442
NCBI-ProteinID:
XP_046177214
LinkDB
All DBs
Position
LG02:complement(74430005..74443378)
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AA seq
1125 aa
AA seq
DB search
MADNEDALRAMQNCFHSQFSVDEAEYEDIEENRRTSVDEDSIYLGCTLSQSFNPDFHHSP
VIKMGWLHKTPPQGTLVFQKRWVMLDAQYLRYFQNEKEVYSKRIIAMLSVTKVLNVGGQK
FELVTRNRTFLFRAENNTVREEWVSVLKETIQQHCNSMEKSLMNFSDTCGQRASRVPLIS
KQGYLEMSGLRSKLYVVICADSVFLYRNAEEHSQGVGITSIEMNLGTVKGTDKRSFNLTT
IYRTFSFVAESEQQREQWVEALQACVSHSLSSNAVAQKIWSEEANQRCADCGAPXPDWAS
VNLCVVLCKCCAGVHRGLGQSVSKVRSLKMDENAWTENQLFLLLGNDKVNLFWAANIPPS
EMLCPSSDSEERQRFVTAKYCQGKYRCYHALFGQQEALNKALCNTIQTGDVLETLSLVFC
GADVNCYTGDPELPSPVSVAQHYGQTLQVEFLTHNHNTELPGSRAGDHTILEAALPISHT
GYLFKTASSTRAVTERKSKGDFSRRWCSLNQGNFSYYESEKSSSQSGQMKMSDVLCLVVN
PQGKHGYGHSFELYHDSGRVYLFGEDSPDTVREWIKVIVKALVPPVAEDLVGWSFERVGR
LRYTVGQSFHCPCLGWFSLGGSRLLLLLHGEDQVDNIDLRKLQELSVEQEVAAVVLVDRG
RRLRLEGDRRPDYQGWLSGIQQGLGRGDGPLDQQQLTETEVPVIVDRCISYITQHGLKSE
GIYRRCGVNSKIAALLLSLRHDARQVRLSEGVCQVDNVANVLKRFLREVGEGVFNGHQAS
LPWLHTTTVSERRERVSQYKALLHSLPPVNRATLGAVINHLYCVQCFADENQMNMHNLAI
VFGPTLFQTDGTDNSAGQVVEELIQNYQDIFNVNAEQLQRQLDMISHVIKAQEEHAEEGT
PSPLTICGIYLERKEEGSELLVQISQAVSAEELVCEVLRRGNIPPQQGDYWSCFLVNDNQ
EMERPLHYQERALAIYFSLGKDCHLVVKRNCYMEAMLIYIAAMVDVSRNSMIKFSDEKGQ
RGKRTFSRRLCVLDGTSLRLYKEVKSTQPERECQVHALKVYYGIKKRLQPPSCWGMTVVC
EQAERDKQQWYLCCESKNELIKWLATFMNLQHNSDLCPAASRPDS
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaatgaggatgcattgcgggccatgcagaactgtttccacagtcagtttagt
gtggatgaggctgagtacgaggacattgaggaaaacaggagaacatctgttgatgaagat
agtatctatcttggctgcacactgtcacaatccttcaaccctgattttcaccactcacct
gttatcaagatgggctggctgcacaagactccgcctcaggggacccttgttttccagaag
cgttgggtgatgttggatgcacagtaccttcgatactttcaaaatgagaaggaggtctac
tcaaagcggatcatagccatgctgtctgtcactaaagtgcttaatgttggaggacagaag
tttgagttggtgacaaggaacaggactttcttgttccgtgctgagaacaacaccgtcagg
gaggaatgggtgtcagtactgaaagagactattcagcagcattgtaacagcatggagaag
tcccttatgaacttcagtgatacatgtggacagcgtgctagtagagtcccgctcattagt
aagcaaggatacctggagatgagtggactgcgctccaagctctatgtagtcatctgtgcc
gacagtgttttcctctataggaacgctgaggagcacagccagggtgttggcatcacctcc
attgagatgaatttgggtactgtgaagggcacagacaaacggtccttcaacctcaccacc
atctacaggacattcagttttgtggccgagtcggagcagcagagggagcagtgggttgag
gccctgcaggcctgtgtcagtcactctctgtccagcaacgcggtggcccagaagatctgg
tctgaggaggccaaccagcgctgtgcagattgtggcgcccccnacccagactgggcctct
gtcaacctgtgtgtggtcctctgcaaatgctgtgcaggggtgcacaggggcctgggccag
agtgtgtccaaagtccgcagtctgaagatggatgaaaatgcgtggactgaaaatcagctg
ttcctgttgctaggtaacgacaaagtaaaccttttctgggcagctaacattccaccaagt
gagatgctctgtccatcaagtgacagtgaggagcgccagcgctttgttactgccaagtac
tgccaggggaaataccgctgctaccatgcactgtttggccaacaggaagccctcaacaaa
gctctgtgcaacaccattcagacaggtgatgtattggagactctgtcgctggtgttctgt
ggagcagatgtgaactgttatacaggtgatccagagctgcccagccctgtgtccgtggcc
cagcactatggacagacacttcaggtggagttcctcactcacaaccacaacacagagctc
ccagggtcaagggctggagatcacacaatcttagaggctgctctccccatctcacacact
ggttatctgttcaagactgcctcctcaacacgagccgttacagagcgcaaatctaaagga
gattttagtcgtcgctggtgctctttgaaccaaggtaacttcagctactatgagagtgag
aagagctccagccagagtggacagatgaagatgagtgatgtcctttgtctggtggtcaat
ccccaagggaaacatggttatggtcattcctttgagctgtaccatgactctgggagagtc
tacctgtttggagaggattcccctgacacggtgagggagtggatcaaggtcattgtcaag
gccctggtcccccctgtagcagaggacctggtgggctggtcctttgagcgggtgggccgg
ctgcgctacactgtgggccagagcttccattgtccttgcctgggctggttctccctgggg
ggctccagactgctcctcctcctccacggagaagaccaagtggataacatcgacctgcga
aaactacaggagctctccgtggagcaagaagttgctgctgtggtgctggtggacagaggc
aggaggctgcgtttggagggggacaggaggcctgactaccagggctggctgagtggcatc
cagcagggcttagggagaggagacggccccctggaccagcagcagcttactgagacagaa
gtccctgtcatcgtggaccgctgcattagctacatcacacaacatggtttgaagtcagag
ggcatctatcggaggtgtggtgtgaactctaagatcgccgccctgctgctctctctccgc
catgacgcccgtcaggttcgtctgagtgaaggggtgtgccaggtggataatgtggccaac
gtcctgaagagattcctcagggaagtgggagagggggttttcaatggccatcaggcctct
ctgccatggctccataccactaccgtcagcgagagaagagagagagtgtcccagtacaag
gccctcctccacagcctccccccagtcaacagagccactctgggggctgtcatcaaccac
ctctactgcgttcagtgctttgcagatgagaatcagatgaacatgcacaacctggccatt
gtgtttggtcccacgctcttccagacggacggcactgataacagcgcaggacaggtggta
gaggagctcatccagaactaccaggatatcttcaatgtgaatgctgagcagcttcagagg
cagctggacatgatctctcatgtcatcaaagcacaggaggaacacgccgaggaggggacc
ccctcacctctcaccatctgtgggatttacctggagaggaaggaggagggctctgagctg
ctggttcagatctcccaggcagtgagtgctgaggagctagtgtgtgaggtcctgagacgc
gggaacatccctccacagcagggggactattggagctgcttcctggtcaacgacaaccag
gagatggagcgtccattgcactaccaggaacgagcgctggccatctatttctctttgggt
aaagactgtcacctggtggtcaagcggaactgctacatggaggccatgttaatctacata
gctgccatggtagacgtgtccagaaacagcatgattaagttcagtgatgagaagggtcag
agggggaagagaaccttcagcagacgcctctgtgtactcgatggcacctctctcaggctc
tacaaagaagtaaagagtactcagcctgagagggaatgtcaagtccatgctctgaaagtc
tactatggcatcaagaagaggctacagccaccatcatgctgggggatgactgtagtgtgt
gagcaggcagaacgagacaaacagcagtggtacctgtgctgtgaatcaaagaacgaattg
atcaagtggctggccacttttatgaacctccagcacaatagtgacctgtgtcctgcagct
tccaggccagattcctga
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