Oncorhynchus gorbuscha (pink salmon): 124009465
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Entry
124009465 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: piezo-type mechanosensitive ion channel component 2-like
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogo04131
]
124009465
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogo04040
]
124009465
Membrane trafficking [BR:
ogo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
124009465
Ion channels [BR:
ogo04040
]
Other channels
Mechanosensitive channel (Piezo)
124009465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_THU9_anchor
Piezo_cap
THU_Piezo1
FAM210A-B_dom
DUF2207_C
ORC5_C
Motif
Other DBs
NCBI-GeneID:
124009465
NCBI-ProteinID:
XP_046177231
LinkDB
All DBs
Position
LG22:complement(49155934..49405854)
Genome browser
AA seq
2907 aa
AA seq
DB search
VVTACLFRYNGLSFVYLIYLLLIPLFAEPTSTTMQGHTGRLLMSLCFSSLSFLLFHIIYQ
ITVNSLLAGNNIDRAFNCSTWEKSIRQIGFESVIGADAGNGIRVFLPDIGMFLAGLACWL
LCRSLFQKRPPEDMAQDNTDYEPEGEEEEEKLSLDDNVLLDEDFEAGYEAGEEEEEEMEE
EEGEDDEEEEESNKMKILRHIAGVASKVKEIIGNLITTAGKVVVTILLGVTGITLPSLTS
AVYFFLFLFLCTWWSFCRTFDTLIFSCMCVLMAIFSAGHLVVLYLYQFQFFQESIPPEDS
YIRLSGISSIIQTDCSIEVGNTLVSSTWRMIVNPDLAWHHFVNPIMLLLLYYTLATLIRL
WLQEPIEEGEDGEEEEEVVGNGTRNSADKRRQLWWKAHQRTEERNGLAAKSNGTSCDIST
LNSVENRPGDEEEEEEMKEEEEEEEEMKEGRVNAVVTVFRFIMKQSYICALIAMMAWSIT
YVSWLTFVFLMWSCMLWMVRDRRRYTMLTSPFMVLYGNLLIVLQYIWSFELLEPVPGLFL
KKDVPFSELGSKVLCLLSFWLLLRQTLTERKDKQREEDAVLTDVHVDDQPKKKKGLQDEE
GGEQDIMQVLGNMVMEMLVKYWIYICGGMFFFVSFEGRMVMYKIIYMMLFLFCVALYQVH
YEYWRRILKYFWMSVVVYTMLVLVLVYTFQFETSLPFWSNMTGMSEEKLKDLGLEQFSVS
MLFTRIFIPTSFLLVCILHLHYFHDRFLLLTDLKAVAQKQDSTIYSHAKVNGRVYLIMNR
LVHQDGSLADITMLSISSGEGVIRADDKKEKKKEGTLVVVMQEKDGGMKQKGGLHQSIDL
RQSFGKSFELHQSFHKSFESSAGSGGSGHCSVGTEPDPSTENTTSDLKNKWHLVVDRLTV
LFLKFLEYFHKLQLFIWWLLEIHIIKIVSSYIILVSVKEVSLFNYVFLACWAFALPFGQF
RPLASSICTVWTCVIIVCKMLYQLESIQPASYSKNCSMPMNYTDKQREEMKDSLLYKEPV
DPSNWVGLNKFNPLLENLRNNLLMLAMLAFEVTIYRHQQYYRLRNKLTAPAARIIFHDIT
RQHLDNGIGNCAKYFINYFFYKFGLETCFLLAVNVIGQRMDFYAVLHAFSLIAVMYRRRR
KAIAEIWPKYCCFQACILTWQYFVCIGIPPAACKDYPWRFPNSAMDSNVIKWLYFPDFHT
NPNPIFLVYDFMLLLCASLQRSVFDEENKAAVRLMAGDNVEICRDLDAASFSVHNPVPDF
IHCRSYLDMLKVIMFSYLFWFVLTIIFITGTTRISLFCLGYLVGCFYFLLFGGELLLKPI
KKILHYWDFLIAYNVFVITMKNILSILACGYINVLVVNNCWLIQLLSLACTIKEYKVKCD
LPSDEAGIIWDSICFAFLLLQRRVFMSYYFLHVVADIRASQILASRGAELFQATIVKAVR
ARLEEENKSMEQLKRQMDRIKQRQEKFKSGKKKMLSLAQESGDRENPIQPQESGDRENPI
QPQEQEEEDDGAEREREKEKVKEKETAKTKKRQWWRPWVDHASMVRSGDYYLFETDSEEE
EEEEEKRDDQELPKKSAFQRAIGKFASALIALPRSIIKLPKTILQYVIRAAKFFYHAWIT
DSKTAMKERGKEKRKFWKRYTKRDKHKKDKKEGHVTIEMEEDPEGTQEKKSDGPDNVLKR
VFNIIKFTWVLFQTTVESFTKWMNNVCREHIDISTVLRIERCMLTREVKKGNVPSRESIH
VFYQKQMRMSMSRGSSLDRLSEEDSASGGSHRVHRRRGDYRMESQDSMASLASRDSISSA
FTEATMLFSRQDTLDELDGMPSDIPIPKTSERARPKLRKIYGLDASKSTDSSSSQVSSET
TQCITLYSRQGTTDTIEEVEDEQDQGENRLHGPWEHPPPDGSEGAEDSPWRGGGDGSQDC
TTDSDDGGVQDRQEYLNREERDRAGLLYTPDTDAPNTSDADVPPSYSKAVSFDRLEVSED
ESDRDDNRMMAMTPDTSRSDYLDDPLLPSLTTELTASELLLNKMFHDEELERSERFYVGQ
PLVLQLVYALYNMLVAHSEMVCYLVIILNNMLSASCVTLVLPILIFLWAMLSVPRPSKRF
WMTAIVYTEVTIVIKYFFQFGFFPFNQNPKVDVNKPYHPPNIIGVEKKDGYVVYDLIQLL
ALFFHRSILKCHGLWDEDNLKDTKKEILRRDSESEDDGRREMEATPVPSTPRERKGSTQT
LRSINLGMGTSVDSVHVPMHNPQPQQQTYQRRKSSSGGSHISHQSVHSVRSKRGSTNSRN
SSHRDGSESVQQKTKKQLIKEKLREQMIKAKTFTIKRTMEVYLPIRLFFYNLVHPEYSAV
TDVYVLMFLADTVDFIIIVFGFSAFGKHSAGADITSSLSEDQVPGAFLVMVLIQFGTMVV
DRALYLKKTVLGKVIFQVILVFGIHFWMFFILPGVTERRFNENTVAKLWYCIKCIYFGLS
AYQIRCGYPTRVLGNFLTKSYNYANLFLFQGFRLIPFLTELRAVMDWVWTDTSLSLSSWI
CVEDIYAHIFVLKCWRESERRYPQPRGQAKKPVVKYGMGGMIVMLLICIIWFPLLFMSLV
KSVVGVVNKPLDVSFSITLAGFQPIFTMSAQQNQLREVSNHEFHNTFMRSYLSDPEAMQW
LESYMPEDLTIAELEGSSNSLWTISPPSRTNIMKMLSSKEQFPITVAWSIQRNPTLGAKA
EFSTGKKVMFLDDKTKLELFLLLNGTRKDGVVIKHGFQRYLRAPTDSEAKPIEQLSTEEV
SITLALERLHNDSEGVQEWWIVNQTSPGKINVRSPKNLYNAGLELYVFSDQVSPPSLGFL
AGYGIMGLYASVVLVIGKFVREFFSGISHTIMFEELPNVDRILKLCTDIFLVRETGELDL
EEDMYAKLIFLYRSPETMIKWTREKTQ
NT seq
8724 nt
NT seq
+upstream
nt +downstream
nt
gtggttacagcttgcttgttccggtacaatgggctatcattcgtctacctcatctacctc
ctccttatccccctcttcgctgagcccaccagcacaaccatgcagggccacacggggcgc
ctgctcatgtccctgtgcttcagcagtctcagcttcctgctcttccacatcatctatcag
atcactgtcaacagtctattggctgggaacaacatagaccgcgccttcaactgttcaacg
tgggagaaatctatacggcaaattggcttcgaaagtgtgataggtgcagatgcagggaac
ggtatccgtgtgttcctccctgacatagggatgttcctagcagggctggcctgctggctt
ctgtgtcgtagtctgtttcagaagagaccgccagaggacatggcccaggacaacactgac
tacgaaccggagggagaggaggaagaggagaagctgagccttgatgacaacgtcctgttg
gatgaggactttgaggctgggtacgaggctggagaagaggaggaggaagagatggaggag
gaagagggggaagatgatgaagaggaggaggagagcaacaagatgaagattctgcgtcac
attgcgggcgtggcgtctaaagtgaaggagatcatcgggaatctgatcaccaccgcggga
aaagtggtggtcactatactgttaggagtcacaggtatcacgctgccctcgctgacctct
gcggtctatttcttcctgttcctgttcctgtgtacgtggtggtcgttctgccgcaccttc
gacaccctcatcttcagctgtatgtgtgtcctcatggccatattcagcgctggacacctg
gtcgtcctctacctctatcagtttcagttcttccaagagagcatccctccagaggacagc
tacatcaggttatctggcatctcatccatcatccagactgactgctctatagaggtaggt
aacaccctggtatcctccacgtggaggatgatagttaaccctgatctggcctggcaccac
tttgtcaaccccattatgctgctgctgctgtactacaccctggccactctcatacgcctc
tggctccaggaacctatagaggagggagaggacggagaggaagaggaggaggtggttggg
aacggcaccaggaactctgcggacaagaggagacagctgtggtggaaagctcaccaacgc
acagaggaaagaaacgggttggctgcaaagtccaacgggacgtcttgtgacatctccacc
ctaaactcggtggagaatagaccgggcgatgaggaggaggaggaggagatgaaggaggag
gaggaggaggaggaggagatgaaggagggcagagtgaatgctgtagtaacagtgttcagg
ttcattatgaagcagagctatatctgtgctctcatagccatgatggcgtggagcatcacg
tatgttagctggctgacgtttgtgttcctgatgtggtcgtgcatgttgtggatggtgagg
gaccgtcgtcgttacaccatgctaacctctcccttcatggtgctctacgggaacctgctc
attgtgctgcagtacatctggagctttgagctgctggagcccgtgcctggactcttcctc
aagaaggacgtgcccttcagtgaactgggatccaaggtcctgtgtctgttgagcttctgg
ctgctgctgagacagactctgacagagagaaaggacaagcagagagaggaggatgctgta
ctcactgacgtacatgtggatgaccaacccaagaagaagaagggacttcaggatgaggaa
ggaggggagcaggacatcatgcaggttctggggaacatggtgatggagatgctggtgaaa
tactggatctatatctgtggaggaatgttcttcttcgtcagcttcgagggacgcatggtc
atgtataagatcatctacatgatgctcttcctcttctgtgtggcgctctatcaggtgcac
tatgagtactggaggaggatactgaagtacttctggatgtctgtggtggtctacaccatg
ctggtcctcgtcctggtctacaccttccagtttgagacttctctacccttctggtctaac
atgactggcatgagtgaagagaaactgaaggacctggggctagaacagttctccgtatcg
atgctcttcacacgtatcttcatccccacctccttcctcctggtgtgtatcctccacctt
cactacttccacgaccgcttcctgctgctcactgacctgaaggctgtggcccaaaaacag
gacagcaccatctacagtcatgctaaagtcaatggtcgcgtgtatctgatcatgaacaga
ctggtacaccaggatggaagcctggctgacatcaccatgctcagcatctcttctggagaa
ggagtgatacgagcagacgacaagaaagagaagaagaaggagggaaccctggtggtggtg
atgcaggagaaagatggagggatgaagcagaaaggaggcctccatcagtctatagacctg
cgtcagtcattcggaaagtcgtttgagttgcatcagtcgttccataagtcgtttgagtcc
agtgcagggtcgggggggagtggccactgcagtgtgggaactgagccagacccctccaca
gaaaacactacctcagacctaaagaataagtggcacctggtggtggaccgtctgactgtg
ctgttcctcaagttcctggaatatttccacaagctgcagctcttcatctggtggctccta
gagatacacatcatcaagatcgtctcttcgtatatcatactggtctctgtcaaggaggtg
tccttgtttaactacgtgttcctggcgtgctgggccttcgctctacccttcggtcagttc
agacccctggcctccagtatctgtacagtctggacctgtgttatcatcgtctgtaagatg
ttgtaccagctggaatctatacaacctgcctcttactccaagaactgctccatgccaatg
aactacacagacaaacagagagaagagatgaaagactctctgctgtacaaggagccagta
gacccgtccaactgggtcggactcaacaaattcaaccctctactggagaacctcaggaac
aacctgctgatgttggccatgctggcgtttgaggtgaccatctaccgtcaccagcagtac
tacagactgaggaacaagctcaccgcgcccgccgctcgcatcatcttccatgacatcacg
cggcaacacctcgacaacggcattggcaactgtgccaagtacttcatcaactacttcttc
tacaagttcgggctggagacatgcttcctactggcggtgaatgtgattggccagcgtatg
gacttctatgctgtgctgcatgccttctctctgatagccgtgatgtacagacgtaggagg
aaagctatagctgagatctggcctaaatactgttgtttccaggcctgtattctaacctgg
cagtactttgtgtgcatcgggataccacctgcagcttgcaaagactacccatggaggttc
ccaaactctgcaatggactccaacgtcatcaagtggctttatttccctgacttccacacc
aaccccaacccaatctttctcgtctatgacttcatgctcctcctctgcgcctcactccag
aggagtgtatttgatgaggagaacaaggcagctgtccgtctcatggccggagacaacgtg
gagatctgcagagatttagacgcggcctcgttcagcgttcacaaccctgtgcctgacttc
atacactgcagatcctacctggacatgctgaaggtgatcatgttcagctacctgttctgg
ttcgtcctcaccatcatcttcatcaccggcaccacacgtatcagcctcttctgtttgggc
tatctggtgggatgtttctacttcctgttgttcggcggggagctgctgctcaagccaatc
aaaaagatcctccactactgggacttcctgatcgcctataacgtgtttgtgatcaccatg
aagaatatcctgtctatcctggcctgtggctacatcaatgtcctggtggtaaataactgc
tggctgatccagctcctcagtctggcctgcaccatcaaggagtataaggtcaagtgtgat
ctgcccagcgacgaggctgggatcatctgggacagcatctgctttgccttcctgctgttg
cagagacgcgtcttcatgagttactacttcctccatgtggtggctgacatcagggcctca
cagatactggcctccagaggggctgaattgttccaggctactatagtgaaggcagtgaga
gccagactggaggaagagaacaagtctatggagcagctgaagagacagatggaccgtata
aagcagcgccaggagaagtttaagagtgggaagaaaaagatgttgagcctggcccaggaa
tctggggacagagagaaccccatccagccgcaggaatctggggacagagagaaccccatc
cagccacaggagcaggaggaagaggatgatggagcagagcgagaaagagagaaagagaaa
gtgaaagagaaagaaacagccaagactaaaaaaaggcagtggtggcggccttgggttgac
cacgcctccatggtgagaagtggagattattacttgtttgaaactgacagtgaagaagag
gaggaagaggaggagaaaagagatgatcaagagctgcccaagaagtcagcgtttcagcga
gctattgggaagtttgcctcagctcttatagctctgcccagatctatcattaaactgccc
aaaaccatccttcagtatgtaatcagggcagccaagtttttctaccatgcctggataaca
gactccaagacagccatgaaggaacgaggcaaagagaagcgtaagttctggaagaggtac
accaagagagacaaacacaagaaggacaagaaggaaggtcatgtgactatagagatggag
gaagatccggagggaacacaggagaagaagtctgacggaccagacaacgtcttgaagcga
gtgttcaacatcatcaagttcacctgggtgttgttccagaccacggtggagagcttcacc
aaatggatgaacaacgtgtgtagagaacacatagacatctccaccgtgctgcgcattgag
agatgcatgctcactagagaggtcaaaaagggaaacgtcccatccagagagagtatccat
gtgttctaccagaagcagatgcgtatgagcatgtctcgggggtccagcctggaccggctc
agtgaggaggacagtgcgtcgggggggtctcacagggtccacaggaggagaggcgactat
cgcatggagagccaggacagcatggcatcgttggcatcacgagacagcatatccagtgcc
ttcactgaggccaccatgctgttctcccgccaagacacgctggacgagctggacggaatg
ccgtcagacattcccattcccaaaacgagtgaacgtgcccggccaaaactccgtaagatt
tacggcctggacgcctccaaatcaactgacagcagcagcagccaagtgtccagtgaaacg
acccagtgcatcactctgtactcccggcagggcaccaccgacaccattgaggaggtggag
gacgaacaggaccagggggaaaacaggctgcacggaccctgggaacacccacctccggac
gggtcagagggggctgaagacagcccctggcggggtggaggagatgggtcccaggactgt
accactgacagtgacgacgggggtgtccaggaccggcaagaatacttgaatagggaagag
cgtgaccgggcggggttgctgtacaccccagacacggacgctccaaatacctcggatgct
gatgtgcctcccagctacagcaaggcggtgagctttgaccgtctggaggtgagtgaggat
gagagcgacagggacgacaataggatgatggcgatgaccccagacaccagccggtcagac
tatctggacgaccctttgctgccctcactgaccactgagctgaccgccagcgaactgctg
ctcaacaagatgttccatgatgaggagctagagcggtcggagcggttctatgtgggccag
cccctggtgctccagttggtctacgccctgtataacatgctggtggcccactctgagatg
gtgtgttacctagtcatcatcctcaacaacatgctgtcagcctcctgcgtcaccctggtc
ctccccatcctcatcttcctctgggccatgctgtcggtacctagacccagtaagaggttc
tggatgactgccattgtatacactgaggtcaccatcgtcatcaagtatttcttccagttt
ggctttttccccttcaaccagaacccgaaggtggacgtgaataaaccctaccaccctcca
aacatcatcggagtggagaagaaagatggatacgtcgtctatgacctcatacaacttctg
gcgctcttcttccacaggtccatcctgaagtgtcatggtctatgggacgaagacaacctt
aaggacaccaagaaggagatcctccgcagggactctgagtcagaggacgatgggaggagg
gagatggaggccactcccgtcccttccacaccccgcgagaggaaggggtccacacagacc
ctcaggtctataaacctgggcatgggcacctccgtggactctgtacacgtccccatgcac
aacccccagccacagcagcagacctaccagagaagaaagagctccagtggagggtctcat
atctcccaccagtcagtccactctgtacgctccaagagaggcagcactaactccaggaac
agtagccacagagacgggagcgagtcagtacagcagaagaccaagaaacagctgatcaag
gagaaactcagagaacagatgatcaaagccaagaccttcactatcaaaaggaccatggag
gtgtacctgcccatccgtctgttcttctacaacctggtccatccagagtacagcgctgtg
acagacgtctatgttctaatgttcctggccgacaccgtcgacttcattatcatcgtcttc
ggcttctctgcttttgggaaacactcagcaggagcagacatcacgtcgtccctgtcggag
gaccaggttcccggagcattcctggtgatggttctgatccagtttgggaccatggtggtg
gaccgggccctgtacctcaagaagacagtgctggggaaggtcatcttccaggtgatcctg
gtgttcgggatccacttctggatgttcttcatcctgcccggagtcactgagaggcgtttc
aatgagaacacagtagccaagctatggtactgtatcaagtgtatctactttgggctgtca
gcctatcagatccgctgtggctaccccaccagagtcctgggtaacttcctcaccaagagc
tacaactacgccaacctcttcctgtttcaagggttccgtctgatcccgttcctgactgag
ctgcgtgcggtgatggactgggtctggaccgacacctctctgtctttatcctcttggatc
tgtgtggaagacatctacgctcacatcttcgtcctcaagtgctggagggagtcagagagg
agatacccccagccgcggggccaggcgaagaagccggtggtgaagtatgggatgggaggg
atgatcgtcatgcttctgatctgtatcatctggttccctctactcttcatgtctctggtc
aagtctgtggtgggggtggtcaacaaaccactggacgtctccttctccatcaccctggcc
gggttccagcccatcttcacaatgagtgctcagcagaaccagctcagagaagtctccaac
catgaattccataacacattcatgaggtcatacctcagcgaccctgaagcgatgcagtgg
ttggagtcctacatgccagaggacctgaccatagctgagttggagggcagctctaacagt
ctgtggaccatcagtcctcccagtagaactaacatcatgaagatgctcagctccaaggag
cagttccccattactgtagcttggtctatccaacggaacccgactctgggagcgaaggct
gagttttctacagggaagaaagtgatgtttctggatgataagaccaagctggagctattc
ctactgctcaatgggaccagaaaagacggagtggtgataaaacatggcttccaacggtat
ctccgagccccgactgactctgaggccaaacccatagagcagctgtctacggaggaagta
tccatcactttggcattagagcgtttacataatgattcagagggggtccaggagtggtgg
atcgtgaaccagactagtccgggaaagatcaacgttcgtagccccaagaatctgtacaac
gctgggctggagctctatgtcttcagcgatcaggtcagccctcctagtctgggctttctg
gctggatacgggatcatgggtctgtacgcctccgtggtgctcgtcatcggtaagttcgtc
cgtgagttcttcagcggtatctcccacaccatcatgttcgaggagctgcccaacgtggac
cgcatcctgaagctgtgcaccgacatcttcctggtccgagagacgggagagctggacctg
gaggaagacatgtacgctaaactcatcttcctctatcgctcgcctgagactatgatcaaa
tggaccagggaaaagactcagtga
DBGET
integrated database retrieval system
