Oncorhynchus gorbuscha (pink salmon): 124009482
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Entry
124009482 CDS
T07892
Name
(RefSeq) cohesin subunit SA-2-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124009482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
124009482
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
124009482
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
124009482
NCBI-ProteinID:
XP_046177259
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Position
LG02:74488845..74511189
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AA seq
1270 aa
AA seq
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MIAAQELHTEFQFPQEADTQLSSDTDLEDPDVKNAKLGKGKVGKKGKKAPGEKGKGVAAK
GAGLGRVNGHHQENGMENMTLFEVVKMGKSATQSVVDDWIESYKNDRDIALLDLINFFIQ
CSGCKGAVSAEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMAGPLWKKFKSSFCEFIGVLV
RQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDN
TQRQYEAERNKVMAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAE
IRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYHNRELNTR
LELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLHSSDEVLTAEDCESVYHLVYSAHRP
VAVAAGEFLYKKLFSHGGPEEEGMPRRGRQSVNGNLIKTTVFFFLESELHEHGAYLVDSL
WECAGELLKDWESMISLLLDEPMPGEEALTDHQETALIEIMLCAIRQACECHPPVGRGTG
KRVLTAKEKKAQLDDRTRITEIFAVALPLLLAKYSVDAEKVTNLLQLPQFFDLEIYTTGR
LEKHLESLLRQIREVVEKHTETDVLEACSMTYHALCNEEFTIFNRVDIARSQLLDELVDK
FNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNAHDLSKWDLFTSNYKLLNTGLQNGD
MPEQIVIHAMQCTHYVILWHLAKISEGSSTKADMVTLRKQMRGFCLMCQSYLTSVNTTVK
EQAFTILCDALMIFSHQIVSSSREQLEALIYTPDSSLQAELLNFILDHVFIDQDDDNNST
DGQHDDEASKIEALHKRRNLLAAYCKLIIYNVVEMNTGADIFKQYMRYYNDYGDIIKETM
SKTRQIDKIQCAKTLILSLQQLFNEMLSDLGCNFDRSSSSFCGIKELARRFSLTFGLDQL
KTREAIAMLHKDGIEFAFKEPSPQGEGNPPLNLAFLDILSEFSSKLLRQDKKTVHLYLER
FMTFQMALQREDCWLPLISYRNSLQAGGDDDTMSVISGYSSRGSSIRSRKAKPASTGKRK
LPEEESSSCSTDAVWMNREQNVQTPVMMPSPHLSSTVLRDPKKMRPEESYMGVYSITSEQ
QQQPLPPQQQHHQTPMDYNTQVTWMLAQRQAEARQQQERASMQYAKMRSHMQHAIRRSSG
LMEDDEEPIVEDVMMSSEDRLEDLNEGMDFDTMDIDLPPSKNRRERSELKPDYFDPSSIM
DDSVLNVSMF
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcacaggagttgcacacagagtttcagtttcctcaggaggctgatacacag
ttgtcctctgacacagaccttgaggaccctgatgtcaaaaatgcaaagcttgggaaagga
aaggtggggaagaaggggaagaaagcccctggagagaagggaaagggtgtggcagcgaag
ggtgctggccttggccgggtgaatggtcaccaccaggagaatgggatggagaacatgacc
ctgttcgaggtggtgaaaatggggaagagtgccacgcagtctgtcgttgatgactggatt
gagtcttacaagaacgatcgagacattgcactcctggacttgatcaacttcttcatccag
tgctccggctgtaaaggtgctgtcagtgcagagatgttcaggcacatgcaaaactctgaa
ataatcaggaagatgactgaggagtttgacgaggacagcggggactacccgttaaccatg
gcagggccactgtggaagaagttcaagtcgagcttctgtgagtttattggggtgctggtg
cggcagtgtcagtacagcatcatctatgacgagtacatgatggacacagtcatctcgctg
ctcacgggcctgtctgactcgcaggtccgagccttcagacacaccagcaccctggcagcc
atgaagttgatgaccgccttggtgaacgtggctctgaacctgagcatcaacatggacaac
actcagaggcagtacgaggcagagaggaacaaggtcatggccaagagggccaatgatagg
ctggagctccttttacagaagcgtaaagagcttcaagaaaatcaagacgaaattgaaaac
atgatgaatgcgattttcaaaggagtgtttgttcacagatatcgtgatgccatagctgaa
atccgtgcaatttgcattgaggagattggggtatggatgaagatgtacagcgatgctttt
ctcaatgacagttatctgaagtatgtcggatggaccatgcatgacaagcaaggtgaagtg
cgtctcaagtgtctgactgcgctccagggcctgtaccataaccgggagctcaacactcgg
ctggagcttttcaccagccgcttcaaggaccgcattgtgtcgatgactctggataaggag
tatgatgttgcagtgcaagccataaaacttctgactcttgtcttgcatagcagtgatgag
gtcctgacagcagaggactgtgagagtgtctaccatctggtctactctgctcatcgacct
gtggctgtggctgcaggagagttcctctataagaagcttttcagccatggaggtccagag
gaggaagggatgcccaggaggggcaggcagagcgtcaacgggaacctcatcaagaccacc
gtcttcttcttcctggagagtgagctccatgagcacggggcctacctggtggacagtctg
tgggagtgtgcaggggagctgctaaaagactgggagagcatgatcagcctgctgctggat
gagcccatgccaggggaggaggccctgactgaccaccaggagactgctctgatcgagatc
atgctgtgtgccatccgccaggcctgtgagtgccaccctccagtgggcagaggcacaggg
aagagggtcttgacagcgaaggagaagaaagcccagctggatgaccggacgagaatcact
gagattttcgctgtggcgttgcctctgttgttggctaagtactctgttgatgctgagaag
gtgaccaacttactgcagctgccgcagttctttgacctggaaatctacaccactggtcga
ttggaaaagcacttggagtcgttgctgcgtcaaatcagggaggtggtggagaagcacaca
gagactgacgtgctggaggcgtgctccatgacctaccacgctctctgcaacgaggagttc
accatcttcaacagggtggacattgccaggtcccagctactggatgagctggtggacaag
ttcaacagactccttgaggacttcctacaagagggtgaggaaccagatgaggatgatgcc
taccaggtcctgtccacactgaagaggatcactgcgttccacaatgcgcatgacctctct
aaatgggacctgttcaccagcaactataagctattaaacacaggacttcagaatggtgat
atgcctgagcagattgtcattcatgcgatgcagtgcacacactatgtcatcctgtggcac
ctagccaagatttccgagggcagctccacaaaggcggacatggtgaccctgaggaagcag
atgaggggtttctgtctgatgtgccagagctacctcaccagtgtcaacaccaccgtcaaa
gagcaggccttcaccatcctgtgtgacgccctgatgatcttcagccaccagattgtgtcg
tcgagccgggagcagctggaggctctgatctacacgccagactcctccctgcaggctgag
ctgctcaacttcatcctggaccacgtcttcatcgaccaggacgacgacaacaacagcaca
gatgggcagcatgatgatgaagccagtaaaatcgaggctttacacaagaggcggaacctg
ctggcagcgtactgcaaactgatcatttacaatgtagtggagatgaacactggagctgat
atcttcaagcagtacatgaggtactacaacgactatggagatatcatcaaggaaacgatg
agtaaaacaagacaaattgacaagatccagtgtgccaagaccctcattctgagtttgcag
cagcttttcaatgagatgttatctgacctcggctgcaactttgaccgctcgtcgtcgtcc
ttctgcggcattaaagaactggcccgacgtttctcgttgacctttggcctggatcagctg
aagaccagagaggctatcgccatgttacacaaggatggaatcgagtttgccttcaaggag
cccagtccccagggagagggaaaccctcctctcaacctagccttcctggacattctcagc
gagttctcctctaaactgctgcgtcaggacaagaagactgttcacctctacctggagcgg
tttatgaccttccagatggccttgcagcgagaggactgctggctgcccctcatctcctac
aggaactccctgcaagccggaggggacgacgacaccatgtccgtcatcagcggctacagc
agccgaggttccagcatcaggagcaggaaggctaagccagccagcaccgggaagaggaaa
ctgcctgaagaggagagtagcagctgcagcacagacgctgtgtggatgaaccgggagcag
aatgtgcaaacgccagtgatgatgccctcgccgcatctcagctccactgtgctgagggac
cccaagaaaatgaggccggaggagagttacatgggcgtctacagcataacatccgagcag
cagcaacaaccgctgcccccccagcagcagcaccatcagacccccatggactacaatacc
caggtgacctggatgctagcccagagacaggcagaggcccggcagcagcaggagcgagcc
agcatgcagtatgccaagatgagaagccacatgcagcatgcaatccgccgcagttcagga
ctcatggaggacgatgaggagccaatagtagaagatgtaatgatgtcatcagaggaccgt
ttggaagatctcaacgagggcatggatttcgacactatggatattgatctgccaccatcg
aaaaatcgtagagagagatcggagctgaagcctgactactttgacccttcttccatcatg
gatgattcggtcctcaatgtttcaatgttctaa
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