KEGG   Oncorhynchus gorbuscha (pink salmon): 124009493
Entry
124009493         CDS       T07892                                 
Name
(RefSeq) RNA-binding protein MEX3B-like
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
ogo  Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:ogo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogo03019]
    124009493
   04121 Ubiquitin system [BR:ogo04121]
    124009493
Enzymes [BR:ogo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124009493
Messenger RNA biogenesis [BR:ogo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     124009493
Ubiquitin system [BR:ogo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124009493
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 zf-C3HC4 KH_BICC1_1st KH_2 RING_XB3-XBAT31 KH_DEAH11_2nd Mito_fiss_reg Prok-RING_4 zf-RING_5
Other DBs
NCBI-GeneID: 124009493
NCBI-ProteinID: XP_046177265
LinkDB
Position
LG22:complement(37100714..37120169)
AA seq 642 aa
MPSPLFHPEIMDHDMVVSSQHNGVSLPRETDQESRDEGHQEVLRFAMDQLSLMALEKVDC
GGGGGGHVDPLDENQGPVSENCNGGYVNLQLLEHPGGSRESPTSCSPSPEYYGSGGYHMA
GPHSHSMLGEQNSIICNRKRSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKT
PVRGEEPVFIVTGRREDVEMAKREIVSAAEHFSMIRASRCKAGATGAPGAGGAIPGPPHL
PGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSREKDPVFEVTGMPENVDRA
REEIETHITLRTGAFVDLQGDNDFHTNGTDVSLEGLGSLGAALWSRANNHHAAPPPPPPP
PPPPLPLAMHHSSGRKLSSLASYHQHKGGMGSESYSAPRRATEGDSPTSPFSTGSSSAGG
GGFTPGLPSEELGFEFSAANIWAPFVNGGGGKVPGSSQQQPLRRNSSGLSGGAITPRLSP
TLPPDAVVGPLDHPMARRAQSDPLSALSWLQSGGTGAGTISGGSSSSSGGSSTGYSSCSA
SSLPGGSPTDSEGGGSGVGLASGMLGRLKPAAGSGAGGLIGVGPGGGSRDCFVCFESEVT
AALVPCGHNLFCMDCAGQICQSADPECPVCHIPATQCIRIFS
NT seq 1929 nt   +upstreamnt  +downstreamnt
atgcctagccccttattccaccccgagattatggaccacgacatggtagtgagcagccag
cacaacggggtcagcctgccccgagaaacggatcaggagtcccgggacgagggccatcag
gaggttctccgcttcgccatggaccagctgtcacttatggccctggagaaggtggactgt
gggggcggtggtggaggtcacgttgacccactcgacgagaaccagggtccagtctccgag
aattgcaacggcggttatgtcaacctgcagttgctggagcacccaggaggctcccgggaa
tccccgacgtcctgctccccgtctccagagtactatggatcgggcgggtaccacatggct
ggcccgcactctcactccatgctcggggaacaaaactcaattatctgcaatcgtaaaagg
agtgtcaacatgaccgaatgcgtacctgtgcccagctccgagcacgttgctgaaatagtg
ggaagacaaggctgtaagatcaaggcactgcgtgcaaagaccaacacctacataaagacc
ccggtgaggggcgaggagcccgtgttcatcgtgacagggcgcagggaggacgtggagatg
gccaagcgggagatcgtctcggcggccgagcacttctccatgatccgggcgtcccgctgc
aaggctggggccacgggagcacccggggccgggggagcaatcccaggtcccccacacctg
cctggacagaccaccatacaggttcgggtgccataccgtgtggttgggttagtggttggt
cccaagggggcgaccatcaagcgcatccagcagcagacccacacctacatcgtgacaccc
agccgggagaaggaccctgtgttcgaggtgactggcatgccagagaatgtggaccgagcc
cgggaggagatcgagacacacatcaccttgcggaccggggccttcgtggacctccaggga
gacaacgactttcacaccaacggaaccgacgttagcttagagggcctgggctcgctgggc
gctgctctctggtctcgggccaacaaccaccatgctgcccctccacccccacctcctcct
ccaccaccgcccctcccgctagccatgcaccactcatctgggaggaagctgtcctccttg
gcctcctaccatcaacataagggagggatgggctctgagagctacagtgcccccaggagg
gccacagagggagacagcccaaccagccccttcagcacaggctccagcagcgctggagga
ggcgggttcacccctggcctcccctctgaggagctgggctttgagttcagcgccgccaac
atctgggcacccttcgtcaatggaggaggagggaaggtcccaggctcctcccagcagcaa
cctctccgccgaaacagcagcggcctgagtggaggcgccatcacaccccgcctgtccccc
accctgccccctgacgccgtggtgggacccctggatcatcctatggcccgccgggcccag
agcgaccccctcagtgccctctcatggctgcagtcgggcggtactggtgcagggaccatc
tccggaggatctagctccagctccggaggctcatccaccggttactcctcctgctcagcc
tcctccctgcccggaggctctcccacagactcggagggcgggggcagtggagtgggcctg
gcctctggcatgctgggccggctgaagcctgcggcaggttctggggctggaggtctgatt
ggtgtagggccagggggcgggagcagggactgttttgtgtgctttgagagcgaggtgaca
gcggccctggtgccctgcggccacaacctcttctgtatggactgcgccggacagatctgc
cagtccgctgatcccgaatgccctgtctgccacatccctgccacacagtgcatccgcatc
ttctcctaa

DBGET integrated database retrieval system